BLASTX nr result

ID: Rehmannia31_contig00022096 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00022096
         (441 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN17742.1| hypothetical protein CDL12_09587 [Handroanthus im...   126   9e-31
ref|XP_011096744.1| pentatricopeptide repeat-containing protein ...   111   2e-25
gb|EYU19069.1| hypothetical protein MIMGU_mgv1a001971mg [Erythra...   103   6e-23
ref|XP_012827466.1| PREDICTED: pentatricopeptide repeat-containi...   103   6e-23
gb|KZV29376.1| pentatricopeptide repeat-containing protein chlor...    70   4e-11

>gb|PIN17742.1| hypothetical protein CDL12_09587 [Handroanthus impetiginosus]
          Length = 770

 Score =  126 bits (316), Expect = 9e-31
 Identities = 74/140 (52%), Positives = 80/140 (57%)
 Frame = +3

Query: 21  MFGGFFVSEPLIEFFSLKNYRHNLPFHCGFSILRRPITVIAPRRKNFYRITTRNALSDGG 200
           M GG  VS+ LIE  SL NY HN  F CGFS LRRPITVIAPRRK   RIT RNA SDG 
Sbjct: 1   MIGGLSVSDSLIEVLSLTNYSHNSLFPCGFSALRRPITVIAPRRKKQNRITIRNASSDGN 60

Query: 201 GVVLDKEFEFQPSFGEYLKAMESFXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXKGSDE 380
           GV+LDKEFEF+PSF EYLKAMES                                + +DE
Sbjct: 61  GVLLDKEFEFKPSFDEYLKAMESVKIDRDNDNHSNGSTRKKRSIKK----IVQEEEDNDE 116

Query: 381 VAAVQRNSRNDKFQRKSAFV 440
           V AVQ NSR   F +KS  V
Sbjct: 117 VTAVQENSRKGDFHKKSKLV 136


>ref|XP_011096744.1| pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic [Sesamum indicum]
          Length = 769

 Score =  111 bits (277), Expect = 2e-25
 Identities = 65/142 (45%), Positives = 79/142 (55%)
 Frame = +3

Query: 15  IKMFGGFFVSEPLIEFFSLKNYRHNLPFHCGFSILRRPITVIAPRRKNFYRITTRNALSD 194
           +KM  G  +SE  I   S  NY H+  +  GF ILR+PI  IAPRRK   R+ TR+ALSD
Sbjct: 1   MKMLDGLCLSESAIGALSFVNYTHSPLYLRGFPILRKPIVAIAPRRKKLDRVITRSALSD 60

Query: 195 GGGVVLDKEFEFQPSFGEYLKAMESFXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXKGS 374
           GGGVVLD+EFEF+PSF EYLKA+E+                          +      G+
Sbjct: 61  GGGVVLDQEFEFKPSFDEYLKALET--VKIDRDNNGDRSNNNDRKKKSIKKIVREEENGN 118

Query: 375 DEVAAVQRNSRNDKFQRKSAFV 440
           DEV AVQ NSR     +KSAFV
Sbjct: 119 DEVTAVQENSRKRVLHKKSAFV 140


>gb|EYU19069.1| hypothetical protein MIMGU_mgv1a001971mg [Erythranthe guttata]
          Length = 732

 Score =  103 bits (258), Expect = 6e-23
 Identities = 54/83 (65%), Positives = 61/83 (73%)
 Frame = +3

Query: 21  MFGGFFVSEPLIEFFSLKNYRHNLPFHCGFSILRRPITVIAPRRKNFYRITTRNALSDGG 200
           M GG  VSE  IE  SL NY H+  FH G S+LR  + VIAPRRK    I TR+ALSDG 
Sbjct: 1   MIGGLSVSESAIEALSLINYTHSSFFHGGSSVLRGSVAVIAPRRKKQKIIATRSALSDGS 60

Query: 201 GVVLDKEFEFQPSFGEYLKAMES 269
           GVVLDKEF+F+PSFG+YLKAMES
Sbjct: 61  GVVLDKEFDFEPSFGDYLKAMES 83


>ref|XP_012827466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic [Erythranthe guttata]
          Length = 775

 Score =  103 bits (258), Expect = 6e-23
 Identities = 54/83 (65%), Positives = 61/83 (73%)
 Frame = +3

Query: 21  MFGGFFVSEPLIEFFSLKNYRHNLPFHCGFSILRRPITVIAPRRKNFYRITTRNALSDGG 200
           M GG  VSE  IE  SL NY H+  FH G S+LR  + VIAPRRK    I TR+ALSDG 
Sbjct: 1   MIGGLSVSESAIEALSLINYTHSSFFHGGSSVLRGSVAVIAPRRKKQKIIATRSALSDGS 60

Query: 201 GVVLDKEFEFQPSFGEYLKAMES 269
           GVVLDKEF+F+PSFG+YLKAMES
Sbjct: 61  GVVLDKEFDFEPSFGDYLKAMES 83


>gb|KZV29376.1| pentatricopeptide repeat-containing protein chloroplastic
           [Dorcoceras hygrometricum]
          Length = 718

 Score = 70.1 bits (170), Expect = 4e-11
 Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = +3

Query: 21  MFGGFFVSEPLIEFFSLKNYRHNLPFHCGFSILRRPITVI-APRRKNFYRITTRNALSDG 197
           M G  +  EP IEF  + N      F+  + +  +  +++ APRR+   RIT+R++  DG
Sbjct: 1   MVGTVYFPEPAIEFACVIN--QGCKFNSSYPLKGQNTSIVLAPRRRKQSRITSRSSSIDG 58

Query: 198 GGVVLDKEFEFQPSFGEYLKAMES 269
           G +VLDKEFEF+PSF EYLKA+ES
Sbjct: 59  GAIVLDKEFEFKPSFDEYLKALES 82


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