BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00022052
         (483 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   126   1e-32
gb|PNY07715.1| ribonuclease H [Trifolium pratense]                    122   2e-32
gb|PNY08539.1| ribonuclease H [Trifolium pratense]                    122   2e-32
gb|PNY07648.1| ribonuclease H, partial [Trifolium pratense]           122   2e-32
gb|PNY15174.1| ribonuclease H, partial [Trifolium pratense]           121   7e-32
gb|PNX71390.1| ribonuclease H [Trifolium pratense]                    119   7e-32
ref|XP_023913142.1| uncharacterized protein LOC112024740 [Quercu...   123   1e-31
ref|XP_023905101.1| uncharacterized protein LOC112016863 [Quercu...   125   3e-31
ref|XP_010682691.2| PREDICTED: uncharacterized protein LOC104897...   120   7e-31
ref|XP_010675471.1| PREDICTED: uncharacterized protein LOC104891...   124   9e-31
dbj|GAV67983.1| hypothetical protein CFOL_v3_11486 [Cephalotus f...   119   1e-30
ref|XP_023881891.1| uncharacterized protein LOC111994244 [Quercu...   119   2e-30
gb|OMO59710.1| reverse transcriptase [Corchorus capsularis]           123   2e-30
gb|PNY02482.1| ribonuclease H, partial [Trifolium pratense]           112   8e-30
gb|PNX98065.1| ribonuclease H [Trifolium pratense]                    112   8e-30
gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]           112   8e-30
gb|PNY18108.1| ribonuclease H, partial [Trifolium pratense]           112   1e-29
gb|PNY15111.1| ribonuclease H [Trifolium pratense]                    114   1e-29
ref|XP_010693383.1| PREDICTED: uncharacterized protein LOC104906...   123   1e-29
ref|XP_023897447.1| uncharacterized protein LOC112009345 [Quercu...   116   2e-29

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  126 bits (317), Expect(2) = 1e-32
 Identities = 62/138 (44%), Positives = 87/138 (63%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R++RN +  I+NEAG   +D D +      +F NLF S  +  MD  L+ +  +I D+L 
Sbjct: 371 REQRNNVRRIRNEAGEWFEDEDDVTECFAHYFENLFQSGNNCEMDPILNIVKPQITDELG 430

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
            +L+A F   E++ AL+ MHP+KAPGPDGM A FYQ FW  I  D++  +L++LNN  + 
Sbjct: 431 TQLDAPFRREEVSAALAQMHPNKAPGPDGMNALFYQHFWDTIGEDVTTKVLNMLNNVDNI 490

Query: 366 SPLNYTHIVLIPKKKDPE 419
             +N THIVLIPKKK  E
Sbjct: 491 GAVNQTHIVLIPKKKHCE 508



 Score = 41.2 bits (95), Expect(2) = 1e-32
 Identities = 16/24 (66%), Positives = 21/24 (87%)
 Frame = +1

Query: 412 TPSDFRPISLCNVIFKIITKTIAN 483
           +P DFRPISLCNV++KI+ K +AN
Sbjct: 509 SPVDFRPISLCNVLYKIVAKVLAN 532


>gb|PNY07715.1| ribonuclease H [Trifolium pratense]
          Length = 1567

 Score =  122 bits (305), Expect(2) = 2e-32
 Identities = 59/137 (43%), Positives = 83/137 (60%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R+R+NTIE IK++  V   + D+IE +    F  LF+S     +D  +  + NR+  ++ 
Sbjct: 544 RRRKNTIEAIKDQMDVTHTNLDEIETIFLNHFQQLFTSQPIFNVDNTVQVVKNRVDQNMY 603

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
           E LN  FTE E+  A+  M    APGPDG+PA FY T+W  +  DI+R IL +LN+G +P
Sbjct: 604 EHLNNDFTEEEVFQAIKDMKSLAAPGPDGLPARFYHTYWDIVGKDITREILQVLNHGGNP 663

Query: 366 SPLNYTHIVLIPKKKDP 416
           +P N THI LIPK   P
Sbjct: 664 TPFNDTHICLIPKINKP 680



 Score = 45.1 bits (105), Expect(2) = 2e-32
 Identities = 21/27 (77%), Positives = 22/27 (81%)
 Frame = +1

Query: 403 KRRTPSDFRPISLCNVIFKIITKTIAN 483
           K   PS+FRPISLCNV  KIITKTIAN
Sbjct: 679 KPSAPSEFRPISLCNVTLKIITKTIAN 705


>gb|PNY08539.1| ribonuclease H [Trifolium pratense]
          Length = 1166

 Score =  122 bits (305), Expect(2) = 2e-32
 Identities = 59/137 (43%), Positives = 83/137 (60%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R+R+NTIE IK++  V   + D+IE +    F  LF+S     +D  +  + NR+  ++ 
Sbjct: 544 RRRKNTIEAIKDQMDVTHTNLDEIETIFLNHFQQLFTSQPIFNVDNTVQVVKNRVDQNMY 603

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
           E LN  FTE E+  A+  M    APGPDG+PA FY T+W  +  DI+R IL +LN+G +P
Sbjct: 604 EHLNNDFTEEEVFQAIKDMKSLAAPGPDGLPARFYHTYWDIVGKDITREILQVLNHGGNP 663

Query: 366 SPLNYTHIVLIPKKKDP 416
           +P N THI LIPK   P
Sbjct: 664 TPFNDTHICLIPKINKP 680



 Score = 45.1 bits (105), Expect(2) = 2e-32
 Identities = 21/27 (77%), Positives = 22/27 (81%)
 Frame = +1

Query: 403 KRRTPSDFRPISLCNVIFKIITKTIAN 483
           K   PS+FRPISLCNV  KIITKTIAN
Sbjct: 679 KPSAPSEFRPISLCNVTLKIITKTIAN 705


>gb|PNY07648.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1152

 Score =  122 bits (305), Expect(2) = 2e-32
 Identities = 59/137 (43%), Positives = 83/137 (60%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R+R+NTIE IK++  V   + D+IE +    F  LF+S     +D  +  + NR+  ++ 
Sbjct: 544 RRRKNTIEAIKDQMDVTHTNLDEIETIFLNHFQQLFTSQPIFNVDNTVQVVKNRVDQNMY 603

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
           E LN  FTE E+  A+  M    APGPDG+PA FY T+W  +  DI+R IL +LN+G +P
Sbjct: 604 EHLNNDFTEEEVFQAIKDMKSLAAPGPDGLPARFYHTYWDIVGKDITREILQVLNHGGNP 663

Query: 366 SPLNYTHIVLIPKKKDP 416
           +P N THI LIPK   P
Sbjct: 664 TPFNDTHICLIPKINKP 680



 Score = 45.1 bits (105), Expect(2) = 2e-32
 Identities = 21/27 (77%), Positives = 22/27 (81%)
 Frame = +1

Query: 403 KRRTPSDFRPISLCNVIFKIITKTIAN 483
           K   PS+FRPISLCNV  KIITKTIAN
Sbjct: 679 KPSAPSEFRPISLCNVTLKIITKTIAN 705


>gb|PNY15174.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1289

 Score =  121 bits (304), Expect(2) = 7e-32
 Identities = 54/137 (39%), Positives = 87/137 (63%)
 Frame = +3

Query: 6    RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
            RK+ N I  +K+  G+  +  + +ERVL  ++ +LF+++    +++ +  +  ++ +D  
Sbjct: 834  RKKVNEIRKLKDHNGIWRNGEENVERVLIDYYSDLFATSDPSNIEETVQVVQGKLREDHK 893

Query: 186  ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
            ER N  FT  EI +A++ MHP KAPGPDG+PAFF+Q +W  I  D+  +IL+ILNN   P
Sbjct: 894  ERCNGDFTREEILEAINQMHPLKAPGPDGLPAFFFQKYWSIIGEDVQSLILNILNNNRPP 953

Query: 366  SPLNYTHIVLIPKKKDP 416
              +N T + LIPK K+P
Sbjct: 954  GDINKTFLTLIPKNKNP 970



 Score = 43.5 bits (101), Expect(2) = 7e-32
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +1

Query: 412  TPSDFRPISLCNVIFKIITKTIAN 483
            TP D+RPISLCNV+ KI+TK IAN
Sbjct: 972  TPKDYRPISLCNVLMKIVTKCIAN 995


>gb|PNX71390.1| ribonuclease H [Trifolium pratense]
          Length = 441

 Score =  119 bits (298), Expect(2) = 7e-32
 Identities = 56/137 (40%), Positives = 83/137 (60%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R+++N IE I +  G    +P++IE V    F +LF+  T+  ++  +  + NRI  D++
Sbjct: 219 RRKKNRIESITDHMGNNHTEPEKIELVFLNHFQHLFNKQTTTNINDTVQVVKNRISQDMH 278

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
           ++LN  FTE E+  A+  M    APGPDG+PA FY T+W  +  DI+  +L ILNN   P
Sbjct: 279 DQLNQVFTEDEVFHAIKEMKGLAAPGPDGLPAKFYHTYWDIVGKDITEAVLQILNNDGSP 338

Query: 366 SPLNYTHIVLIPKKKDP 416
           +P N THI LIPK  +P
Sbjct: 339 APFNSTHICLIPKTNNP 355



 Score = 45.8 bits (107), Expect(2) = 7e-32
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +1

Query: 415 PSDFRPISLCNVIFKIITKTIAN 483
           PSDFRPISLCNV  KIITKTIAN
Sbjct: 358 PSDFRPISLCNVTLKIITKTIAN 380


>ref|XP_023913142.1| uncharacterized protein LOC112024740 [Quercus suber]
          Length = 1194

 Score =  123 bits (309), Expect(2) = 1e-31
 Identities = 60/138 (43%), Positives = 86/138 (62%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R++RN I  I+N+ G  V+D  ++  V   +F  +F S T  RM++ L+ +  R+  ++ 
Sbjct: 214 RRKRNFIHGIQNQHGNWVEDIGEVAEVAINYFETIFHSGTCERMEECLNTVPQRMTTNMK 273

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
           E L+  +T  E+  AL  M P+KAPGPDGM A FYQ FW  + +D+S  +LD LN+G   
Sbjct: 274 EELSKPYTGEEVKAALFQMGPTKAPGPDGMNALFYQRFWHIVGNDVSSAVLDFLNSGTML 333

Query: 366 SPLNYTHIVLIPKKKDPE 419
             +NYTHIVLIPK K PE
Sbjct: 334 PEINYTHIVLIPKVKSPE 351



 Score = 40.8 bits (94), Expect(2) = 1e-31
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = +1

Query: 418 SDFRPISLCNVIFKIITKTIAN 483
           +DFRPISLCNVI+KII+K +AN
Sbjct: 354 TDFRPISLCNVIYKIISKVLAN 375


>ref|XP_023905101.1| uncharacterized protein LOC112016863 [Quercus suber]
 ref|XP_023916048.1| uncharacterized protein LOC112027624 [Quercus suber]
          Length = 1377

 Score =  125 bits (314), Expect(2) = 3e-31
 Identities = 62/138 (44%), Positives = 87/138 (63%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R R+NTI  IK+EA     DPD I  VL +F+  LF ++    +D+ L  +   I D++N
Sbjct: 372 RFRKNTIRGIKDEADQLHTDPDGIASVLNKFYQELFETSNPTHVDEVLSYVLPCITDEMN 431

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
           + L A F E E+  AL+ M P KAPGPDGMP  FYQ FW  +  D+++ +L  LN+G+ P
Sbjct: 432 QELVADFKEGEVAAALNEMAPLKAPGPDGMPPLFYQHFWKVVDKDVTQDVLLWLNSGILP 491

Query: 366 SPLNYTHIVLIPKKKDPE 419
            P+N+T + LIPKK +PE
Sbjct: 492 EPVNHTFLTLIPKKSNPE 509



 Score = 37.4 bits (85), Expect(2) = 3e-31
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = +1

Query: 421 DFRPISLCNVIFKIITKTIAN 483
           +FRPISLCNVI+KI +K +AN
Sbjct: 513 EFRPISLCNVIYKIFSKVLAN 533


>ref|XP_010682691.2| PREDICTED: uncharacterized protein LOC104897505 [Beta vulgaris
           subsp. vulgaris]
          Length = 1284

 Score =  120 bits (302), Expect(2) = 7e-31
 Identities = 60/138 (43%), Positives = 83/138 (60%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R++RN ++ IKNEAG   +D D+I      +F NLF S      D  +D ++  + +D+ 
Sbjct: 553 REKRNRVQRIKNEAGTIFEDEDEIAECFVNYFDNLFRSNPGGETDPVVDLVEKMVSEDMV 612

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
             L A F   E+  ALS MHP+KAPGPDGM A FYQ+FW  I  D+   ++  LNN  D 
Sbjct: 613 TMLAAPFRREEVIFALSQMHPNKAPGPDGMNALFYQSFWNIIGEDVIDKVMLFLNNIDDI 672

Query: 366 SPLNYTHIVLIPKKKDPE 419
             +N+TH+VLIPKK+  E
Sbjct: 673 GAVNHTHLVLIPKKQQCE 690



 Score = 40.8 bits (94), Expect(2) = 7e-31
 Identities = 15/24 (62%), Positives = 22/24 (91%)
 Frame = +1

Query: 412 TPSDFRPISLCNVIFKIITKTIAN 483
           +P DFRPISLCNV++K+++K +AN
Sbjct: 691 SPIDFRPISLCNVLYKLVSKVLAN 714


>ref|XP_010675471.1| PREDICTED: uncharacterized protein LOC104891474 isoform X1 [Beta
           vulgaris subsp. vulgaris]
          Length = 437

 Score =  124 bits (312), Expect = 9e-31
 Identities = 63/135 (46%), Positives = 84/135 (62%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R+ RN +  IKN AG   ++ + I      +F++LF+ST +  MD  LD +D  + D + 
Sbjct: 288 REMRNNVRCIKNAAGDVFEEEEDIMECFVDYFNHLFTSTNNCDMDPVLDLVDPLVDDRMK 347

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
           E L A +   E++ ALS MHP+KAPGPDGM A FYQTFW  I  D++  IL+ LN   D 
Sbjct: 348 EMLAAPYRREEVSLALSQMHPNKAPGPDGMNALFYQTFWETIGEDVTDKILNFLNGVDDI 407

Query: 366 SPLNYTHIVLIPKKK 410
             +N THIVLIPKKK
Sbjct: 408 GAVNQTHIVLIPKKK 422


>dbj|GAV67983.1| hypothetical protein CFOL_v3_11486 [Cephalotus follicularis]
          Length = 197

 Score =  119 bits (297), Expect = 1e-30
 Identities = 55/138 (39%), Positives = 87/138 (63%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R+RRN I  IK+E G   +D +  +R+++ +FH++F S+  + + + L+ +D ++  D+N
Sbjct: 45  RRRRNRIIGIKDENGTWQEDENVYKRLISTYFHSIFLSSQPIELTRVLEHVDEKVSRDMN 104

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
           + LNA F   EI  AL  +HP+KAPGPD M A FYQ +   +  ++  +++ IL  G  P
Sbjct: 105 DTLNADFNRPEIELALRQIHPTKAPGPDVMAAIFYQKYCSTVEDEVVDLVMSILQGGPMP 164

Query: 366 SPLNYTHIVLIPKKKDPE 419
             +NYTHI LIP  K+PE
Sbjct: 165 ESVNYTHIALIPNVKNPE 182


>ref|XP_023881891.1| uncharacterized protein LOC111994244 [Quercus suber]
          Length = 1198

 Score =  119 bits (299), Expect(2) = 2e-30
 Identities = 57/143 (39%), Positives = 88/143 (61%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R+RRNTI  I +E G   D  + I +V   +F  ++SS+   R+ + LDA+   + +++N
Sbjct: 202 RRRRNTINGIMDENGNWQDSTEGIAKVAVSYFQTIYSSSVPTRISEVLDAIPTTVTEEMN 261

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
             L   FT  EI  AL+ MHP+KAPGPDGM A F+Q +W  + +DI  ++LD+LN+ +  
Sbjct: 262 HSLIQEFTREEIETALNQMHPTKAPGPDGMSAIFFQKYWNIVGNDIVCMVLDVLNSNMSM 321

Query: 366 SPLNYTHIVLIPKKKDPE*FSTY 434
             +N T+I L+PK K+P   S +
Sbjct: 322 VEINKTNITLVPKIKNPTKMSDF 344



 Score = 40.8 bits (94), Expect(2) = 2e-30
 Identities = 16/22 (72%), Positives = 21/22 (95%)
 Frame = +1

Query: 418 SDFRPISLCNVIFKIITKTIAN 483
           SDFRPISLCNV++K+I+K +AN
Sbjct: 342 SDFRPISLCNVVYKLISKVLAN 363


>gb|OMO59710.1| reverse transcriptase [Corchorus capsularis]
          Length = 1799

 Score =  123 bits (308), Expect(2) = 2e-30
 Identities = 60/138 (43%), Positives = 88/138 (63%)
 Frame = +3

Query: 6    RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
            R+++N+IE ++ E G   DDP +I+ + + +F  LF S+ S   D+ L+A++  I  ++N
Sbjct: 798  RRKKNSIEQLEGENGRLSDDPVEIQDIASAYFKKLFISSGSKHYDEILEAVNPSITTEMN 857

Query: 186  ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
            E L A FT  EI  AL  +HP+KAPGPDGMP FF++ FW  + SD++   LD  +  +D 
Sbjct: 858  EHLLADFTAEEIFTALKQIHPTKAPGPDGMPVFFFKKFWHIVGSDVTSFCLDFFHGNLDL 917

Query: 366  SPLNYTHIVLIPKKKDPE 419
            S  N THIVLIPK   P+
Sbjct: 918  SIANKTHIVLIPKVDKPK 935



 Score = 37.0 bits (84), Expect(2) = 2e-30
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = +1

Query: 403  KRRTPSDFRPISLCNVIFKIITKTIAN 483
            K +  + FRPISLCNV++KII+K + N
Sbjct: 933  KPKNITQFRPISLCNVLYKIISKVLVN 959


>gb|PNY02482.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1070

 Score =  112 bits (279), Expect(2) = 8e-30
 Identities = 54/137 (39%), Positives = 81/137 (59%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R+ +N IE I +  G ++    +IE VL   F NLF+   +  + + +  ++ RI  D++
Sbjct: 160 RRSKNKIETITDTQGQKLYKDTEIENVLVDHFKNLFTKQDTHNIKETVQIVEGRISQDMH 219

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
           + L+  FT+ E+  A+  M    APGPDG+PA FY  +W  I  D++ + LDILNN  DP
Sbjct: 220 QELSKIFTKEEVFQAIKDMKSLAAPGPDGLPALFYHNYWEIIGEDVTNMALDILNNNSDP 279

Query: 366 SPLNYTHIVLIPKKKDP 416
           S LN T+I LIPK  +P
Sbjct: 280 SHLNSTYICLIPKTNNP 296



 Score = 46.2 bits (108), Expect(2) = 8e-30
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +1

Query: 412 TPSDFRPISLCNVIFKIITKTIAN 483
           TPSDFRPISLCNV  KI+TKT+AN
Sbjct: 298 TPSDFRPISLCNVSLKIVTKTLAN 321


>gb|PNX98065.1| ribonuclease H [Trifolium pratense]
          Length = 1011

 Score =  112 bits (279), Expect(2) = 8e-30
 Identities = 54/137 (39%), Positives = 81/137 (59%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R+ +N IE I +  G ++    +IE VL   F NLF+   +  + + +  ++ RI  D++
Sbjct: 6   RRSKNKIETITDTQGQKLYKDTEIENVLVDHFKNLFTKQDTHNIKETVQIVEGRISQDMH 65

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
           + L+  FT+ E+  A+  M    APGPDG+PA FY  +W  I  D++ + LDILNN  DP
Sbjct: 66  QELSKIFTKEEVFQAIKDMKSLAAPGPDGLPALFYHNYWEIIGEDVTNMALDILNNNSDP 125

Query: 366 SPLNYTHIVLIPKKKDP 416
           S LN T+I LIPK  +P
Sbjct: 126 SHLNSTYICLIPKTNNP 142



 Score = 46.2 bits (108), Expect(2) = 8e-30
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +1

Query: 412 TPSDFRPISLCNVIFKIITKTIAN 483
           TPSDFRPISLCNV  KI+TKT+AN
Sbjct: 144 TPSDFRPISLCNVSLKIVTKTLAN 167


>gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]
          Length = 916

 Score =  112 bits (279), Expect(2) = 8e-30
 Identities = 54/137 (39%), Positives = 81/137 (59%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R+ +N IE I +  G ++    +IE VL   F NLF+   +  + + +  ++ RI  D++
Sbjct: 6   RRSKNKIETITDTQGQKLYKDTEIENVLVDHFKNLFTKQDTHNIKETVQIVEGRISQDMH 65

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
           + L+  FT+ E+  A+  M    APGPDG+PA FY  +W  I  D++ + LDILNN  DP
Sbjct: 66  QELSKIFTKEEVFQAIKDMKSLAAPGPDGLPALFYHNYWEIIGEDVTNMALDILNNNSDP 125

Query: 366 SPLNYTHIVLIPKKKDP 416
           S LN T+I LIPK  +P
Sbjct: 126 SHLNSTYICLIPKTNNP 142



 Score = 46.2 bits (108), Expect(2) = 8e-30
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +1

Query: 412 TPSDFRPISLCNVIFKIITKTIAN 483
           TPSDFRPISLCNV  KI+TKT+AN
Sbjct: 144 TPSDFRPISLCNVSLKIVTKTLAN 167


>gb|PNY18108.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1485

 Score =  112 bits (279), Expect(2) = 1e-29
 Identities = 52/137 (37%), Positives = 85/137 (62%)
 Frame = +3

Query: 6    RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
            R+++N+I+ IK+  G +  + ++IE++L   F  LF+S  +  + +    + N+I  D+N
Sbjct: 760  RRKKNSIDSIKDPNGQKHYEHEEIEKILLNHFQQLFTSQPTTNVTETAQVVKNKITQDMN 819

Query: 186  ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
            + L+  FTE E+ +A+  M    APGPDG+PA FY T+W  +  DI+R+ L +LN+  +P
Sbjct: 820  DHLSQDFTEEEVFNAIKDMKGLAAPGPDGLPARFYHTYWEIVGKDITRMALKVLNHEGNP 879

Query: 366  SPLNYTHIVLIPKKKDP 416
               N THI LIPK  +P
Sbjct: 880  EAFNTTHICLIPKITNP 896



 Score = 45.8 bits (107), Expect(2) = 1e-29
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +1

Query: 415 PSDFRPISLCNVIFKIITKTIAN 483
           PSDFRPISLCNV  KIITKTIAN
Sbjct: 899 PSDFRPISLCNVTLKIITKTIAN 921


>gb|PNY15111.1| ribonuclease H [Trifolium pratense]
          Length = 1334

 Score =  114 bits (286), Expect(2) = 1e-29
 Identities = 52/138 (37%), Positives = 85/138 (61%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           RK+ N I+ +K+  GV     D +ER+L  +F ++FS++  + +D   D +  ++ ++  
Sbjct: 337 RKKVNNIKKLKDSHGVWWHGEDNVERLLIDYFADIFSTSDPVNVDSTCDVVRGKLTEEHK 396

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
           E  ++ F+  E+ +A+  MHP KAPGPDG+PA F+Q +W  +  D+ R++L ILNN   P
Sbjct: 397 EFCSSLFSAEEVKEAIFQMHPLKAPGPDGLPALFFQKYWHIVGRDVQRLVLQILNNDRSP 456

Query: 366 SPLNYTHIVLIPKKKDPE 419
             +N T I LIPK K P+
Sbjct: 457 EDINRTFIALIPKVKSPQ 474



 Score = 42.7 bits (99), Expect(2) = 1e-29
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +1

Query: 409 RTPSDFRPISLCNVIFKIITKTIAN 483
           + P D+RPISLCNV+ KI+TK IAN
Sbjct: 474 QAPKDYRPISLCNVVMKIVTKVIAN 498


>ref|XP_010693383.1| PREDICTED: uncharacterized protein LOC104906342 [Beta vulgaris
           subsp. vulgaris]
          Length = 1157

 Score =  123 bits (309), Expect(2) = 1e-29
 Identities = 59/145 (40%), Positives = 97/145 (66%), Gaps = 2/145 (1%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSST--TSLRMDQALDALDNRIPDD 179
           R+ RN ++ + +  GV  +D D+++ ++ +++H+LF+ST  T+ +M + L  ++  I  +
Sbjct: 167 RRTRNRMKGLLDSEGVWHEDEDKMQEIVEKYYHDLFTSTEPTTAQMQEVLKHMERVISPE 226

Query: 180 LNERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGV 359
           +NE L+  +T+AEI +AL  MHPSKAPGPDGM A F+Q FW  +  D++ ++++IL+ G 
Sbjct: 227 INEVLSRPYTKAEIFEALQQMHPSKAPGPDGMHAIFFQKFWHIVGDDVAGLVINILHGGE 286

Query: 360 DPSPLNYTHIVLIPKKKDPE*FSTY 434
            P   N T+IV+IPK KDP   S Y
Sbjct: 287 MPEHFNRTNIVMIPKIKDPTELSKY 311



 Score = 33.9 bits (76), Expect(2) = 1e-29
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = +1

Query: 418 SDFRPISLCNVIFKIITKTI 477
           S +RPISLCNVI+K+++K I
Sbjct: 309 SKYRPISLCNVIYKLVSKAI 328


>ref|XP_023897447.1| uncharacterized protein LOC112009345 [Quercus suber]
          Length = 1144

 Score =  116 bits (290), Expect(2) = 2e-29
 Identities = 55/143 (38%), Positives = 84/143 (58%)
 Frame = +3

Query: 6   RKRRNTIEWIKNEAGVRVDDPDQIERVLTQFFHNLFSSTTSLRMDQALDALDNRIPDDLN 185
           R ++N I  + +  GV  ++   I  ++   + +LF S       + L+A+  ++ DD+N
Sbjct: 222 RLKKNFITGLLDSQGVWCEEEHVIGEIVVSHYADLFCSNQPTEFFELLNAVQPKVSDDMN 281

Query: 186 ERLNASFTEAEITDALSHMHPSKAPGPDGMPAFFYQTFWPHIRSDISRVILDILNNGVDP 365
            RLN  F + E+  AL  M+P K+PGP GMP  F+Q FWP I + +++++LD LN G  P
Sbjct: 282 RRLNMPFQDLEVYSALKQMYPLKSPGPGGMPPLFFQHFWPTIGNTVTKMVLDFLNFGSAP 341

Query: 366 SPLNYTHIVLIPKKKDPE*FSTY 434
              N TH+VLIPK KDP+  S Y
Sbjct: 342 PKFNDTHVVLIPKNKDPKNISDY 364



 Score = 40.8 bits (94), Expect(2) = 2e-29
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = +1

Query: 418 SDFRPISLCNVIFKIITKTIAN 483
           SD+RPISLCNVIFKI +K IAN
Sbjct: 362 SDYRPISLCNVIFKIASKVIAN 383