BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00022015
         (483 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023909336.1| uncharacterized protein LOC112020997 [Quercu...   135   1e-33
ref|XP_010686853.1| PREDICTED: uncharacterized protein LOC104901...   123   2e-32
gb|POE61472.1| putative ribonuclease h protein [Quercus suber]        118   5e-30
gb|POF00498.1| putative ribonuclease h protein [Quercus suber]        115   4e-29
gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]           122   5e-29
gb|POE82186.1| putative ribonuclease h protein [Quercus suber]        118   9e-29
dbj|GAU48804.1| hypothetical protein TSUD_406370 [Trifolium subt...   117   1e-28
gb|POE83317.1| hypothetical protein CFP56_39883 [Quercus suber]       114   2e-28
gb|POE58912.1| putative ribonuclease h protein [Quercus suber]        113   2e-28
dbj|GAU39028.1| hypothetical protein TSUD_59840 [Trifolium subte...   119   3e-28
ref|XP_023916738.1| uncharacterized protein LOC112028299 [Quercu...   118   8e-28
dbj|GAU50334.1| hypothetical protein TSUD_243120 [Trifolium subt...   114   1e-27
ref|XP_023872411.1| uncharacterized protein LOC111985024 [Quercu...   117   1e-27
ref|XP_023920731.1| uncharacterized protein LOC112032201 [Quercu...   117   2e-27
ref|XP_023907624.1| uncharacterized protein LOC112019319 [Quercu...   116   5e-27
dbj|GAU51007.1| hypothetical protein TSUD_411560 [Trifolium subt...   115   7e-27
gb|OMO52105.1| reverse transcriptase [Corchorus capsularis]           115   7e-27
gb|PNX92808.1| ribonuclease H [Trifolium pratense]                    115   9e-27
dbj|GAU33706.1| hypothetical protein TSUD_148570 [Trifolium subt...   114   1e-26
gb|POE75907.1| putative ribonuclease h protein [Quercus suber]        115   1e-26

>ref|XP_023909336.1| uncharacterized protein LOC112020997 [Quercus suber]
          Length = 1369

 Score =  135 bits (339), Expect = 1e-33
 Identities = 61/156 (39%), Positives = 88/156 (56%)
 Frame = +2

Query: 5    DKRIWVHTKSGDFSVRSCYYLIKSTLSNSDTAKPSTSFKNTAWRRMWELRLLPRIKHFLW 184
            D RIW  TK+G +S +S Y L+  T  ++     + S  N+ W  +W+L +  ++KHFLW
Sbjct: 1009 DGRIWKETKNGVYSTKSAYRLLSKTAISNQPGTSNPSMLNSFWTNIWKLNIPNKVKHFLW 1068

Query: 185  RACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQNN 364
            RAC+D+LPTK NL+RR I+ +  C LC +  E   H    C  +K IW+   +       
Sbjct: 1069 RACSDSLPTKMNLVRRKIITNVTCDLCRDQPEDAIHALWDCHGVKEIWWKEEVCKPFLLE 1128

Query: 365  AFVSFRNLFWSLLSTHPIEFVELFAFLAWSIWSARN 472
             FV+F++LF  +L  H     E  AF+AWSIW  RN
Sbjct: 1129 RFVNFQDLFLGILKAHDPHLAERVAFIAWSIWYKRN 1164


>ref|XP_010686853.1| PREDICTED: uncharacterized protein LOC104901008 [Beta vulgaris
           subsp. vulgaris]
          Length = 199

 Score =  123 bits (309), Expect = 2e-32
 Identities = 54/155 (34%), Positives = 92/155 (59%), Gaps = 1/155 (0%)
 Frame = +2

Query: 17  WVHTKSGDFSVRSCYYLIKSTLSNSDTAKPSTSFKNTAWRRMWELRLLPRIKHFLWRACT 196
           W+ T+SGDF V+S YY+      + + A PS    N  W+++W+ ++  +I++F W+   
Sbjct: 4   WIWTRSGDFMVKSAYYVALKE-RDKERAGPSNDNVNEGWKKLWKAQVPSKIQNFSWKPSN 62

Query: 197 DTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQNNAFVS 376
             LP ++NLI+R I+MD IC  CGE++E++ H+  QC+  +R+WYL PLR+        S
Sbjct: 63  QALPMRNNLIKRQIVMDYICKRCGEEVESVEHVLVQCKEAQRLWYLLPLRLSFNQGVVTS 122

Query: 377 FRNLFWSLLSTHPIE-FVELFAFLAWSIWSARNKL 478
           F++  W+ +     + +  +F  L W++W A N L
Sbjct: 123 FKDWVWNHIKIIKDKGWWNIFWSLCWTLWLAMNDL 157


>gb|POE61472.1| putative ribonuclease h protein [Quercus suber]
          Length = 224

 Score =  118 bits (295), Expect = 5e-30
 Identities = 58/157 (36%), Positives = 90/157 (57%)
 Frame = +2

Query: 5   DKRIWVHTKSGDFSVRSCYYLIKSTLSNSDTAKPSTSFKNTAWRRMWELRLLPRIKHFLW 184
           D  +W+  KSG FS++S Y  +      S+    S   + + W+ +W+L +  +IKHFLW
Sbjct: 12  DSLVWLVEKSGQFSIKSGYKCLCEDPQASEPDSESAEVQRSFWKGVWKLNIPGKIKHFLW 71

Query: 185 RACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQNN 364
           ++CT++LPTK+NL++R ++   +CHLC E  E + H   +C  ++++W  S   +D    
Sbjct: 72  KSCTNSLPTKNNLLKRIVISKNVCHLCSEHPEDVMHAMWRCSKVRQVWQRSFGWLDHNQV 131

Query: 365 AFVSFRNLFWSLLSTHPIEFVELFAFLAWSIWSARNK 475
           A  SF NL   L+ T P  F  LFA  AW +W  RNK
Sbjct: 132 AEGSFPNLV-RLIQTKPRMF-PLFAVTAWVVWHHRNK 166


>gb|POF00498.1| putative ribonuclease h protein [Quercus suber]
          Length = 224

 Score =  115 bits (289), Expect = 4e-29
 Identities = 62/162 (38%), Positives = 90/162 (55%), Gaps = 4/162 (2%)
 Frame = +2

Query: 5   DKRIWVHTKSGDFSVRSCYYLI----KSTLSNSDTAKPSTSFKNTAWRRMWELRLLPRIK 172
           D  IW HT  G +SV+S Y L+    +S L +S T +    F    W+R+W L++  ++K
Sbjct: 44  DLLIWPHTSGGSYSVKSAYQLLAVGTRSALPSSSTTEDCKPF----WKRIWNLQVPNKVK 99

Query: 173 HFLWRACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMD 352
           HF+WRA +++LPTK NL +R IL + IC LC E IE        C+ +K IW+       
Sbjct: 100 HFMWRASSESLPTKLNLFQRHILPENICSLCEEHIEDTILCLWLCDRVKCIWFSDSKFSP 159

Query: 353 LQNNAFVSFRNLFWSLLSTHPIEFVELFAFLAWSIWSARNKL 478
            ++  F SF +L  ++L+        LF  +AWSIW  RNKL
Sbjct: 160 PRSKIFRSFGDLASAVLADASPATTALFLMVAWSIWIRRNKL 201


>gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]
          Length = 894

 Score =  122 bits (305), Expect = 5e-29
 Identities = 64/160 (40%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2    ADKRIWVHTKSGDFSVRSCYYLIKSTLSNSDTAKPSTSFKNTAWRRMWELRLLPRIKHFL 181
            ADK IW   K+G+FSVRS Y+++ S + N ++ + S+S  +  W+ +W++++   IK+FL
Sbjct: 596  ADKLIWHWEKNGEFSVRSAYHML-SEIRNQNSPEASSSRDHLLWKAIWKVKVPNCIKNFL 654

Query: 182  WRACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQN 361
            WR     LPT+S L ++GI +DT C LC  DIE   HLF  C   K++W+ SPL +   N
Sbjct: 655  WRLAKAILPTRSRLEKKGITLDTTCPLCFNDIECNEHLFMHCPLSKQVWFSSPLGLHAPN 714

Query: 362  N-AFVSFRNLFWSLLSTHPIEFVELFAFLAWSIWSARNKL 478
            N   +S+  L+   LS       +LF+   W IW  RNKL
Sbjct: 715  NVGLISWMQLW---LSNPDKLASQLFSTTLWMIWKGRNKL 751


>gb|POE82186.1| putative ribonuclease h protein [Quercus suber]
          Length = 391

 Score =  118 bits (296), Expect = 9e-29
 Identities = 57/159 (35%), Positives = 88/159 (55%), Gaps = 3/159 (1%)
 Frame = +2

Query: 5   DKRIWVHTKSGDFSVRSCYYLIKSTLSNSDTAKPSTS---FKNTAWRRMWELRLLPRIKH 175
           D+ IW  T +G ++ +S Y L+   L  ++ A P+TS    +   W+++W L +  +I+H
Sbjct: 29  DRLIWAETTNGYYTTKSAYRLL---LKEAEAATPATSNLAAQKLFWQKLWSLNVPNKIRH 85

Query: 176 FLWRACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDL 355
           F+WRA  D+LPTK NL +R I  D  C  C + IE   H    C+ +K++W+      + 
Sbjct: 86  FMWRAANDSLPTKKNLQKRNITQDLTCDRCRDGIEDGIHAIWGCQMVKQVWWELENCREY 145

Query: 356 QNNAFVSFRNLFWSLLSTHPIEFVELFAFLAWSIWSARN 472
            N  F SF +L   +L+    +  ELFAF+ WSIW  RN
Sbjct: 146 LNERFASFHDLLQGILAQKNPKLAELFAFIGWSIWHERN 184


>dbj|GAU48804.1| hypothetical protein TSUD_406370 [Trifolium subterraneum]
          Length = 321

 Score =  117 bits (292), Expect = 1e-28
 Identities = 59/158 (37%), Positives = 88/158 (55%)
 Frame = +2

Query: 5   DKRIWVHTKSGDFSVRSCYYLIKSTLSNSDTAKPSTSFKNTAWRRMWELRLLPRIKHFLW 184
           DK IW   K G+FSVRS +++IK T  N +  + S+S     W+ +W+++  P +K+FLW
Sbjct: 59  DKLIWHWEKDGNFSVRSAHHMIKET-DNLNIPEASSSNNQEIWKAVWKIKAPPSVKNFLW 117

Query: 185 RACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQNN 364
           R   D LPT+  L R+G+ +DTIC LC E  E   HLF +C  +++ W+ S L + + + 
Sbjct: 118 RLARDILPTRGRLKRKGLSLDTICLLCFEAEENRDHLFMRCRLVQQTWFCSSLGLHIPSQ 177

Query: 365 AFVSFRNLFWSLLSTHPIEFVELFAFLAWSIWSARNKL 478
              S ++     LS   I   +LF    W IW  RN L
Sbjct: 178 R--SLQDWLVEWLSNKNILASQLFGITLWKIWQGRNLL 213


>gb|POE83317.1| hypothetical protein CFP56_39883 [Quercus suber]
          Length = 221

 Score =  114 bits (284), Expect = 2e-28
 Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
 Frame = +2

Query: 95  TAKPS-TSFKNTAWRRMWELRLLPRIKHFLWRACTDTLPTKSNLIRRGILMDTICHLCGE 271
           T  PS TS + + WRR+W L +  +IKHFLWRAC D+LPTK NL+ R +  + +C  C E
Sbjct: 8   TPSPSDTSAQTSGWRRIWALNVPNKIKHFLWRACRDSLPTKKNLLARNVTKNALCEWCNE 67

Query: 272 DIETLSHLFTQCETIKRIWYLSPLRMDLQNNAFVSFRNLFWSLLSTHPIEFVELFAFLAW 451
           ++E   H    C+ +K +W+   +  +  +  FV FR+L+  + +       E FAF AW
Sbjct: 68  EVEDSVHALWGCQALKEVWWEEEILRNHLSMRFVDFRDLWIGITNLDAPNLAEQFAFAAW 127

Query: 452 SIWSARN 472
           SIW+ RN
Sbjct: 128 SIWNKRN 134


>gb|POE58912.1| putative ribonuclease h protein [Quercus suber]
          Length = 209

 Score =  113 bits (283), Expect = 2e-28
 Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
 Frame = +2

Query: 14  IWVHTKSGDFSVRSCYYLIKSTLSNSDTAKPSTSFKNTA-WRRMWELRLLPRIKHFLWRA 190
           +W  T +G F VRS Y L      +S+    S   K    W+R+W L++  +++ F WRA
Sbjct: 5   VWAATLNGLFIVRSAYKLAMEESRSSNRGSSSNPSKTCRFWKRLWSLQVPHKVRPFTWRA 64

Query: 191 CTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQNNAF 370
           C   LPTK NL+RR I ++  C  C E++E + H+   C   K +W  + ++        
Sbjct: 65  CKSILPTKENLVRRAIQLNVGCEECKEEVEFVGHILWSCSRAKEVWPCTKMKFHFDQTRV 124

Query: 371 VSFRNLFWSLLSTHPI--EFVELFAFLAWSIWSARNKL 478
            SF +L W +L T     E  EL   +AW++WS RNK+
Sbjct: 125 NSFHDLLWQILMTDSFEEEGTELVVIVAWALWSNRNKV 162


>dbj|GAU39028.1| hypothetical protein TSUD_59840 [Trifolium subterraneum]
          Length = 1626

 Score =  119 bits (299), Expect = 3e-28
 Identities = 62/159 (38%), Positives = 89/159 (55%)
 Frame = +2

Query: 2    ADKRIWVHTKSGDFSVRSCYYLIKSTLSNSDTAKPSTSFKNTAWRRMWELRLLPRIKHFL 181
            ADK IW   K+G+FSVRS Y+++     N ++ + S+S     W+ +W++ +   IK+FL
Sbjct: 1269 ADKLIWHWEKNGEFSVRSAYHMLSED-RNKNSPEASSSRDQLLWKTIWKVNVPNCIKNFL 1327

Query: 182  WRACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQN 361
            WR     LPT+  L ++GI +DT C LC  DIE   HLF QC   K++W+ SPL +   N
Sbjct: 1328 WRVAKAILPTRGRLEKKGITLDTTCPLCFNDIECNEHLFMQCPLSKQVWFSSPLGLHAPN 1387

Query: 362  NAFVSFRNLFWSLLSTHPIEFVELFAFLAWSIWSARNKL 478
            N  ++     W  LS       +LF+   W IW  RNKL
Sbjct: 1388 NFSLNSWMQLW--LSNPDKLASQLFSTTLWMIWKGRNKL 1424


>ref|XP_023916738.1| uncharacterized protein LOC112028299 [Quercus suber]
          Length = 1318

 Score =  118 bits (296), Expect = 8e-28
 Identities = 57/157 (36%), Positives = 86/157 (54%)
 Frame = +2

Query: 2    ADKRIWVHTKSGDFSVRSCYYLIKSTLSNSDTAKPSTSFKNTAWRRMWELRLLPRIKHFL 181
            AD R+W  +K+G +S +S Y L+  T +N+     ++S     W  +W L +  +IKHFL
Sbjct: 957  ADVRVWSESKNGIYSTKSEYRLLAKTATNNQPGPSNSSAHRELWTNIWRLNIPNKIKHFL 1016

Query: 182  WRACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQN 361
            WRA +++LPTK NL  R I+ +  C  C +  E   H    C  +K IW+   L     +
Sbjct: 1017 WRASSESLPTKKNLCHRKIITNDTCDFCRDYPEDGIHALWDCYMVKEIWWKEELCRPHIS 1076

Query: 362  NAFVSFRNLFWSLLSTHPIEFVELFAFLAWSIWSARN 472
              FV+F++LF  +L+    +  E FA +AWSIW  RN
Sbjct: 1077 EKFVNFQDLFLGILNKLDNQLAERFAIIAWSIWFKRN 1113


>dbj|GAU50334.1| hypothetical protein TSUD_243120 [Trifolium subterraneum]
          Length = 303

 Score =  114 bits (284), Expect = 1e-27
 Identities = 57/158 (36%), Positives = 87/158 (55%)
 Frame = +2

Query: 5   DKRIWVHTKSGDFSVRSCYYLIKSTLSNSDTAKPSTSFKNTAWRRMWELRLLPRIKHFLW 184
           DK IW   K G+FSVRS +++IK    N +  + S+S     W+ +W+++  P +K+FLW
Sbjct: 106 DKLIWHWEKDGNFSVRSTHHMIKEA-DNLNIPEASSSNNQEIWKAVWKIKAPPSVKNFLW 164

Query: 185 RACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQNN 364
           R   D LPT+  + R+G+ +DTIC LC E  E   HLF +C  +++ W+ S L + + + 
Sbjct: 165 RLAKDILPTRGRIKRKGLSLDTICPLCFEAEENRDHLFMRCRLVQQTWFCSSLGLHVPSQ 224

Query: 365 AFVSFRNLFWSLLSTHPIEFVELFAFLAWSIWSARNKL 478
              S ++     LS   I   +LF    W IW  RN L
Sbjct: 225 R--SLQDWLVEWLSNKNILASQLFGITLWKIWQGRNLL 260


>ref|XP_023872411.1| uncharacterized protein LOC111985024 [Quercus suber]
          Length = 1229

 Score =  117 bits (294), Expect = 1e-27
 Identities = 63/160 (39%), Positives = 85/160 (53%), Gaps = 3/160 (1%)
 Frame = +2

Query: 5    DKRIWVHTKSGDFSVRSCYYLIKSTLSNSDTAKPST-SFKNTAWRRMWELRLLPRIKHFL 181
            DK++W  T +G FSVRS Y L     S++     S  S     WR +W   +  +I+HF 
Sbjct: 863  DKQVWALTNNGLFSVRSAYKLAMELRSDAHGESGSDGSHLRRFWRTIWSCNIPHKIRHFA 922

Query: 182  WRACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQN 361
            WRAC D LPTK NL+RR +L ++ C  C    ET  HLF  CE  + IW LS L  D   
Sbjct: 923  WRACRDVLPTKENLVRRKVLSESCCEECKLAEETSGHLFWSCERAREIWCLSALFQDSLV 982

Query: 362  NAFVSFRNLFWSLLSTHPIEF--VELFAFLAWSIWSARNK 475
              F SF ++ W ++     E   VE    +AW++WS RN+
Sbjct: 983  QHFGSFMDMLWYVVMMAKWEHSDVEKLIVVAWALWSNRNE 1022


>ref|XP_023920731.1| uncharacterized protein LOC112032201 [Quercus suber]
          Length = 1371

 Score =  117 bits (293), Expect = 2e-27
 Identities = 61/160 (38%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
 Frame = +2

Query: 5    DKRIWVHTKSGDFSVRSCYYLIKS-TLSNSDTAKPSTSFKNTAWRRMWELRLLPRIKHFL 181
            D+ IW +T  G F+V S Y +  S T  N D        +   WR++W LR+  +IK F 
Sbjct: 1008 DRIIWAYTPKGKFTVNSAYKVAMSMTQGNLDAEASHGELQIRFWRQVWNLRIPNKIKLFT 1067

Query: 182  WRACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQN 361
            WRAC + LPTK+NL  R +L ++ C  C  D ET  HLF  C   K +W  + L  D   
Sbjct: 1068 WRACKNILPTKANLYHRHVLDNSTCEACNLDPETTGHLFWDCHLAKEVWTSADLPFDRTG 1127

Query: 362  NAFVSFRNLFWSLLSTHPI--EFVELFAFLAWSIWSARNK 475
              +  F +  W LL T  +  E +EL    AW IW  RNK
Sbjct: 1128 IRYRDFMDFLWDLLFTQHVGTEIIELTVTTAWCIWFDRNK 1167


>ref|XP_023907624.1| uncharacterized protein LOC112019319 [Quercus suber]
          Length = 787

 Score =  116 bits (290), Expect = 5e-27
 Identities = 60/160 (37%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
 Frame = +2

Query: 5    DKRIWVHTKSGDFSVRSCYYLIKSTL-SNSDTAKPSTSFKNTAWRRMWELRLLPRIKHFL 181
            D+ IW +T  G F+V S Y +  +T  S S   +  T+ K T WR +W L +  +IK+F 
Sbjct: 551  DRIIWAYTPKGIFTVNSAYKVALATSPSASIVGQSDTTAKETFWRTLWSLNIPNKIKNFA 610

Query: 182  WRACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQN 361
            WRAC + LPTK NL  RG+L    C  CG   ET  HLF +C   + +W  + +  D Q 
Sbjct: 611  WRACRNILPTKVNLRHRGVLESATCEACGVADETSGHLFWECTKAREVWLATGIPFDTQG 670

Query: 362  NAFVSFRNLFWSLLSTHPI--EFVELFAFLAWSIWSARNK 475
              +  F +L W L+       E +EL   +AW +W  RNK
Sbjct: 671  VYYRDFIDLIWYLIFVKHAGRELLELILSVAWCMWYNRNK 710


>dbj|GAU51007.1| hypothetical protein TSUD_411560 [Trifolium subterraneum]
          Length = 1556

 Score =  115 bits (289), Expect = 7e-27
 Identities = 56/162 (34%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
 Frame = +2

Query: 5    DKRIWVHTKSGDFSVRSCYYLIKS--TLSNSDTAKPSTSFKNTAWRRMWELRLLPRIKHF 178
            D+  W  T  G++SV+S Y  +        + T + +T   ++ W ++W+LR  P+  H 
Sbjct: 1188 DEISWRGTNDGNYSVKSGYNAMIEWDQAKENPTQQSNTHMADSNWAKIWKLRNPPKQIHL 1247

Query: 179  LWRACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQ 358
            LWR   + +P K+NLI +GIL DT+C  C +  ET  H F  C+  ++ W+ SPL ++L 
Sbjct: 1248 LWRVLHNAIPVKANLIAKGILCDTLCPRCNKSPETTDHTFLNCDWAQKTWFSSPLSINLY 1307

Query: 359  NNAFVSFRNLFWSLLSTHPIEFVELFAFLAWSIWSARN-KLY 481
             + + SF + F+ +L+  P E +E+   + +SIW ARN K+Y
Sbjct: 1308 KSRYQSFSDWFYYMLNNTPKECIEMITTITYSIWYARNQKIY 1349


>gb|OMO52105.1| reverse transcriptase [Corchorus capsularis]
          Length = 1565

 Score =  115 bits (289), Expect = 7e-27
 Identities = 56/164 (34%), Positives = 96/164 (58%), Gaps = 8/164 (4%)
 Frame = +2

Query: 5    DKRIWVHTKSGDFSVRSCYYLIKS-TLSNSDTAKPSTSFKNT-AWRRMWELRLLPRIKHF 178
            D+ IW  T+ G++SV+S Y L+ S  +S  +  + S+S + +  WR +W L++ P++K+F
Sbjct: 1203 DRLIWHFTRDGNYSVKSRYRLLTSEAISFGNNGQSSSSMQQSRTWRNLWNLKVAPKVKNF 1262

Query: 179  LWRACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQ 358
            LWR+C + +PTK NL++R   + + C  CG ++E+L H+   C   + +W  S      +
Sbjct: 1263 LWRSCRNIVPTKENLVKRHCSLFSQCDRCGAEVESLEHILFFCPFAQAVWRASHFSYSPR 1322

Query: 359  NNAFVSFRNLFW------SLLSTHPIEFVELFAFLAWSIWSARN 472
            +  FVSF  L W      +++S   +  VEL  +L W++W ARN
Sbjct: 1323 SEGFVSF--LKWWEESANTIVSFGSLNVVELIRYLCWNVWKARN 1364


>gb|PNX92808.1| ribonuclease H [Trifolium pratense]
          Length = 930

 Score =  115 bits (288), Expect = 9e-27
 Identities = 58/161 (36%), Positives = 91/161 (56%), Gaps = 3/161 (1%)
 Frame = +2

Query: 5    DKRIWVHTKSGDFSVRSCYYLIKSTLSNSDTAKPSTSFK---NTAWRRMWELRLLPRIKH 175
            D+  W +TK G ++V+S Y  I+      D  KPSTS+K   N+ W+++W L++ P+  H
Sbjct: 561  DEFSWPYTKDGIYTVKSGYQAIQDW--KEDPNKPSTSYKPKNNSVWQKLWHLKIPPKYTH 618

Query: 176  FLWRACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDL 355
             +WR   D LP +SNL +RG+    +C  C E+IE L+H+F+ C   K++W+ SPL +  
Sbjct: 619  LIWRILQDALPVQSNLRKRGVNCYPLCPRCKENIEDLNHVFSGCWWAKQVWFASPLTLKF 678

Query: 356  QNNAFVSFRNLFWSLLSTHPIEFVELFAFLAWSIWSARNKL 478
              N F SF+N     +     + + L   + + IW ARN L
Sbjct: 679  DQNEF-SFKNWIEDNIRKDQSQNMNLIGAICYHIWRARNLL 718


>dbj|GAU33706.1| hypothetical protein TSUD_148570 [Trifolium subterraneum]
          Length = 527

 Score =  114 bits (286), Expect = 1e-26
 Identities = 59/158 (37%), Positives = 87/158 (55%)
 Frame = +2

Query: 5   DKRIWVHTKSGDFSVRSCYYLIKSTLSNSDTAKPSTSFKNTAWRRMWELRLLPRIKHFLW 184
           DK IW   K G+FSVRS +++IK T  N +  + S+S     W  +W+++  P +K+FLW
Sbjct: 194 DKLIWHWEKDGNFSVRSAHHMIKET-DNLNIPEASSSNNQEIWEAVWKIKAPPSVKNFLW 252

Query: 185 RACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRMDLQNN 364
           R   D LPT+  L R+G+ +DTIC LC E  E   HLF +C  +++ W+ S L + + + 
Sbjct: 253 RLAKDILPTRGRLKRKGLSLDTICPLCFEVEENRDHLFMRCRLVQQTWFCSSLGIHVPSQ 312

Query: 365 AFVSFRNLFWSLLSTHPIEFVELFAFLAWSIWSARNKL 478
              S ++     LS   I   +LF    W IW  RN L
Sbjct: 313 R--SLQDWLVEWLSNKNILASKLFRITLWKIWQGRNLL 348


>gb|POE75907.1| putative ribonuclease h protein [Quercus suber]
          Length = 848

 Score =  115 bits (287), Expect = 1e-26
 Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 5/161 (3%)
 Frame = +2

Query: 5   DKRIWVHTKSGDFSVRSCYYLIKSTLSNSDTAKPSTSFKNTA-----WRRMWELRLLPRI 169
           D+ IW  T +G ++ +S Y L+   L  ++ A P TS  N+A     W+ +W L +  +I
Sbjct: 486 DRLIWAETTNGYYTTKSAYRLL---LKEAEAAAPGTS--NSAAQKLFWQELWSLNVPNKI 540

Query: 170 KHFLWRACTDTLPTKSNLIRRGILMDTICHLCGEDIETLSHLFTQCETIKRIWYLSPLRM 349
           +HF+WRA  D+LPTK NL ++ I  D  C  C + I+   H+   C+ +K++W+      
Sbjct: 541 RHFMWRAANDSLPTKKNLQKQNITQDPTCDRCRDGIKDGIHVIWGCQMVKQVWWELENCR 600

Query: 350 DLQNNAFVSFRNLFWSLLSTHPIEFVELFAFLAWSIWSARN 472
           +  N  F SF +L   +L+    +  ELFAF+ WSIW  RN
Sbjct: 601 EYLNKKFASFHDLLQGILAQKNPKLAELFAFIGWSIWHERN 641