BLASTX nr result

ID: Rehmannia31_contig00021534 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00021534
         (415 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN13892.1| K+-channel ERG [Handroanthus impetiginosus]             88   2e-17
ref|XP_020553229.1| cyclic nucleotide-gated ion channel 1 [Sesam...    79   2e-14
ref|XP_022871445.1| cyclic nucleotide-gated ion channel 1-like [...    62   1e-08
ref|XP_006345559.1| PREDICTED: cyclic nucleotide-gated ion chann...    59   2e-07
ref|XP_016510636.1| PREDICTED: cyclic nucleotide-gated ion chann...    59   3e-07
ref|XP_004306680.1| PREDICTED: cyclic nucleotide-gated ion chann...    58   6e-07
ref|XP_010321517.1| PREDICTED: cyclic nucleotide-gated ion chann...    57   1e-06
ref|XP_004240079.1| PREDICTED: cyclic nucleotide-gated ion chann...    57   1e-06
emb|CDP08690.1| unnamed protein product [Coffea canephora]             56   2e-06
ref|XP_015074516.1| PREDICTED: cyclic nucleotide-gated ion chann...    56   2e-06
gb|PHU17855.1| Cyclic nucleotide-gated ion channel 1 [Capsicum c...    55   4e-06
ref|XP_011038085.1| PREDICTED: cyclic nucleotide-gated ion chann...    55   5e-06
gb|PRQ58437.1| putative potassium channel, voltage-dependent, EA...    55   7e-06
gb|PNT03954.1| hypothetical protein POPTR_014G097900v3 [Populus ...    55   7e-06
ref|XP_016580009.1| PREDICTED: cyclic nucleotide-gated ion chann...    55   7e-06
ref|XP_002320197.2| hypothetical protein POPTR_0014s09350g [Popu...    55   7e-06
ref|XP_024176142.1| cyclic nucleotide-gated ion channel 1-like [...    55   7e-06

>gb|PIN13892.1| K+-channel ERG [Handroanthus impetiginosus]
          Length = 714

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 44/68 (64%), Positives = 49/68 (72%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKSFSFDSSRNRRLNIPLRKPNLSSIMGGIRRGVDRGSERIKSF 29
           MN NG+KYVRF+DC+SE SFS     NRRL  PL   NLSSIMG IRR  D  SERIKS 
Sbjct: 1   MNFNGDKYVRFDDCNSENSFSSKGQSNRRL-FPLTSSNLSSIMGRIRRRFDMSSERIKSL 59

Query: 28  RNWSLHGH 5
           R W+L+GH
Sbjct: 60  RRWNLNGH 67


>ref|XP_020553229.1| cyclic nucleotide-gated ion channel 1 [Sesamum indicum]
          Length = 717

 Score = 79.0 bits (193), Expect = 2e-14
 Identities = 42/69 (60%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKSFSFDSSRNRRLNIPLRKPNLSSIMGGIRRGVDRGSERIKSF 29
           MNI+G+KYVRF+DC+SE SFS +   NR L  PLRKPN   I+GGIRR  DR SERIK+ 
Sbjct: 1   MNISGKKYVRFKDCNSESSFSSEGQSNRGL-FPLRKPNFRPIVGGIRRAFDRSSERIKNL 59

Query: 28  RNWSLH-GH 5
           R  S+  GH
Sbjct: 60  RIRSIDWGH 68


>ref|XP_022871445.1| cyclic nucleotide-gated ion channel 1-like [Olea europaea var.
           sylvestris]
          Length = 709

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 35/68 (51%), Positives = 42/68 (61%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKSFSFDSSRNRRLNIPLRKPNLSSIMGGIRRGVDRGSERIKSF 29
           M I   KYVRFE+ +SE SFS +   N     P   PNLSS+M G+RRG + GS R+KS 
Sbjct: 1   MKIKPRKYVRFEESNSETSFSPEQHSNS-WQFPKWNPNLSSVMSGVRRGFEIGSSRMKSL 59

Query: 28  RNWSLHGH 5
           R  SLH H
Sbjct: 60  RK-SLHSH 66


>ref|XP_006345559.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Solanum
           tuberosum]
 ref|XP_006345560.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Solanum
           tuberosum]
 ref|XP_015163420.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Solanum
           tuberosum]
          Length = 723

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKS-FSFDSSRNRRLNIP--LRKPNLSSIMGGIRRGVDRGSERI 38
           MN N +KYVRFED  SE+S FS D+  N + N P  +RKP+LSS+M  ++R  +RGSERI
Sbjct: 2   MNPNQDKYVRFEDWKSEQSSFSIDNE-NSQDNRPFYVRKPSLSSLMSSVKRRFERGSERI 60

Query: 37  KSFR 26
            S+R
Sbjct: 61  SSWR 64


>ref|XP_016510636.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Nicotiana
           tabacum]
 ref|XP_018625693.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Nicotiana
           tomentosiformis]
          Length = 717

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 33/61 (54%), Positives = 43/61 (70%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKSFSFDSSRNRRLNIPLRKPNLSSIMGGIRRGVDRGSERIKSF 29
           MN+  +KYVRFED  SE+S SF+S  NR  +I  RKP+ S +M  IRR ++ GSERI S+
Sbjct: 2   MNLKQDKYVRFEDWKSEES-SFNSPNNRPFHI--RKPSFSLLMSNIRRRLESGSERISSW 58

Query: 28  R 26
           R
Sbjct: 59  R 59


>ref|XP_004306680.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Fragaria
           vesca subsp. vesca]
          Length = 719

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKS------FSFDSSRNRRLNIPLRKPNLSSIMGGIRRGVDRGS 47
           MN+ G K+VRF+D  SE+S      FS D  RNRR      +P+L++++  IRRG DRGS
Sbjct: 1   MNLKGTKFVRFDDWRSERSTSSEREFSTDDGRNRRRP----RPSLNAVLSSIRRGFDRGS 56

Query: 46  ERIKSFR 26
           +R K+ R
Sbjct: 57  DRFKTLR 63


>ref|XP_010321517.1| PREDICTED: cyclic nucleotide-gated ion channel 1 isoform X3
           [Solanum lycopersicum]
          Length = 648

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKS-FSFDSSRNRRLNIP--LRKPNLSSIMGGIRRGVDRGSERI 38
           MN N +KYVRFE+  SE+S FS D+  N + N P  +RKP+LSS+M  +RR ++ GSERI
Sbjct: 2   MNPNQDKYVRFEEWKSEQSSFSIDNE-NSQDNRPFYVRKPSLSSLMSSVRRRLESGSERI 60

Query: 37  KSFR 26
            S+R
Sbjct: 61  SSWR 64


>ref|XP_004240079.1| PREDICTED: cyclic nucleotide-gated ion channel 1 isoform X1
           [Solanum lycopersicum]
          Length = 723

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKS-FSFDSSRNRRLNIP--LRKPNLSSIMGGIRRGVDRGSERI 38
           MN N +KYVRFE+  SE+S FS D+  N + N P  +RKP+LSS+M  +RR ++ GSERI
Sbjct: 2   MNPNQDKYVRFEEWKSEQSSFSIDNE-NSQDNRPFYVRKPSLSSLMSSVRRRLESGSERI 60

Query: 37  KSFR 26
            S+R
Sbjct: 61  SSWR 64


>emb|CDP08690.1| unnamed protein product [Coffea canephora]
          Length = 623

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKSFSFDSSR---NRRLNIPLRKPNLSSIMGGIRRGVDRGSERI 38
           M +  ++YVRFED  SE++ SFDS +   + R  + +RKP+L S++  IRRG +RGSER+
Sbjct: 1   MELKQDRYVRFEDWSSERT-SFDSKQQFSSTRGLLSIRKPSLGSMISSIRRGFERGSERM 59

Query: 37  KSFR 26
           KS +
Sbjct: 60  KSLK 63


>ref|XP_015074516.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Solanum
           pennellii]
          Length = 723

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKS-FSFDSSRNRRLN-IPLRKPNLSSIMGGIRRGVDRGSERIK 35
           MN N +KYVRFE+  SE+S FS D+  ++      +RKP+LSS+M  +RR   RGSERI 
Sbjct: 2   MNPNQDKYVRFEEWKSEQSSFSIDNENSQDYRPFYVRKPSLSSLMSSVRRRFGRGSERIS 61

Query: 34  SFR 26
           S+R
Sbjct: 62  SWR 64


>gb|PHU17855.1| Cyclic nucleotide-gated ion channel 1 [Capsicum chinense]
          Length = 723

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKS-FSFD---SSRNRRLNIPLRKPNLSSIMGGIRRGVDRGSER 41
           +N+  +KYVRFED  SE+S FS D   S  NR  ++  RKP+ SS+M   +R ++RGSER
Sbjct: 2   INLKQDKYVRFEDWKSEQSSFSIDGQNSQDNRHFHV--RKPSFSSLMSSFKRRLERGSER 59

Query: 40  IKSFR 26
           I S+R
Sbjct: 60  ISSWR 64


>ref|XP_011038085.1| PREDICTED: cyclic nucleotide-gated ion channel 1 [Populus
           euphratica]
          Length = 720

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKSFSFDSSRNRRLNIPLR--KPNLSSIMGGIRRGVDRGSERIK 35
           MNING K+VRF+D  SEKSFS +   +    +  R  KP   S+   IRRG + GSERI+
Sbjct: 1   MNINGNKFVRFQDWSSEKSFSSERQYSYEYGLYARKAKPIFYSVWDNIRRGWEMGSERIR 60

Query: 34  SFR 26
           S +
Sbjct: 61  SLK 63


>gb|PRQ58437.1| putative potassium channel, voltage-dependent, EAG/ELK/ERG [Rosa
           chinensis]
          Length = 564

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
 Frame = -1

Query: 208 MNINGEKYVRFED------CDSEKSFSFDSSRNRRLNIPLRKPNLSSIMGGIRRGVDRGS 47
           MN+ G K+VRF D        SE+ FS D  RN R      +P++++++  IRRG DRGS
Sbjct: 1   MNLKGTKFVRFADWHSEGSTSSEREFSTDDGRNPRSP----RPSVNAVLSSIRRGFDRGS 56

Query: 46  ERIKSFR 26
           +R KSF+
Sbjct: 57  DRFKSFK 63


>gb|PNT03954.1| hypothetical protein POPTR_014G097900v3 [Populus trichocarpa]
          Length = 721

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKSFSFDSSRNRRLNIPLR--KPNLSSIMGGIRRGVDRGSERIK 35
           MN+NG K+VRF+D  SEKSFS +   +       R  KP   S+   IRRG + GSERI+
Sbjct: 1   MNLNGNKFVRFQDWSSEKSFSSEQQYSNEYGFYARKAKPIFYSVWDNIRRGWEMGSERIR 60

Query: 34  SFR 26
           S +
Sbjct: 61  SLK 63


>ref|XP_016580009.1| PREDICTED: cyclic nucleotide-gated ion channel 1 [Capsicum annuum]
 gb|PHT81607.1| putative cyclic nucleotide-gated ion channel 6 [Capsicum annuum]
          Length = 723

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKS-FSFD---SSRNRRLNIPLRKPNLSSIMGGIRRGVDRGSER 41
           +N+  +KYVRFED  SE+S FS D   S  NR  ++  RKP+ SS+M   +R ++RGSER
Sbjct: 2   INLKQDKYVRFEDRKSEQSSFSIDGQNSQDNRHFHV--RKPSFSSLMSSFKRRLERGSER 59

Query: 40  IKSFR 26
           I S R
Sbjct: 60  ISSLR 64


>ref|XP_002320197.2| hypothetical protein POPTR_0014s09350g [Populus trichocarpa]
 gb|PNT03955.1| hypothetical protein POPTR_014G097900v3 [Populus trichocarpa]
          Length = 723

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
 Frame = -1

Query: 208 MNINGEKYVRFEDCDSEKSFSFDSSRNRRLNIPLR--KPNLSSIMGGIRRGVDRGSERIK 35
           MN+NG K+VRF+D  SEKSFS +   +       R  KP   S+   IRRG + GSERI+
Sbjct: 1   MNLNGNKFVRFQDWSSEKSFSSEQQYSNEYGFYARKAKPIFYSVWDNIRRGWEMGSERIR 60

Query: 34  SFR 26
           S +
Sbjct: 61  SLK 63


>ref|XP_024176142.1| cyclic nucleotide-gated ion channel 1-like [Rosa chinensis]
 ref|XP_024176143.1| cyclic nucleotide-gated ion channel 1-like [Rosa chinensis]
 ref|XP_024176144.1| cyclic nucleotide-gated ion channel 1-like [Rosa chinensis]
          Length = 725

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
 Frame = -1

Query: 208 MNINGEKYVRFED------CDSEKSFSFDSSRNRRLNIPLRKPNLSSIMGGIRRGVDRGS 47
           MN+ G K+VRF D        SE+ FS D  RN R      +P++++++  IRRG DRGS
Sbjct: 1   MNLKGTKFVRFADWHSEGSTSSEREFSTDDGRNPRSP----RPSVNAVLSSIRRGFDRGS 56

Query: 46  ERIKSFR 26
           +R KSF+
Sbjct: 57  DRFKSFK 63


Top