BLASTX nr result

ID: Rehmannia31_contig00021244 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00021244
         (525 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007042189.2| PREDICTED: probable LRR receptor-like serine...    39   8e-06
gb|EOX98020.1| Leucine-rich repeat protein kinase family protein...    39   8e-06
gb|ALK28647.1| zinc finger protein 36 C3H type-like 3 [Acomys pe...    55   1e-05

>ref|XP_007042189.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At2g16250 [Theobroma cacao]
          Length = 906

 Score = 39.3 bits (90), Expect(2) = 8e-06
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -1

Query: 171 SDESLIKRGRSGDIFMGQLFGLGPVVVKRI 82
           SD +LIK G SGD+F G L G  PVV+KRI
Sbjct: 523 SDANLIKHGHSGDLFRGILEGGSPVVIKRI 552



 Score = 37.7 bits (86), Expect(2) = 8e-06
 Identities = 17/25 (68%), Positives = 22/25 (88%)
 Frame = -2

Query: 77  EAFSIELDFFSRISHHSRFVPLLGH 3
           EA+ +ELDFFS++S H+R VPLLGH
Sbjct: 560 EAYLLELDFFSKVS-HTRVVPLLGH 583


>gb|EOX98020.1| Leucine-rich repeat protein kinase family protein [Theobroma cacao]
          Length = 906

 Score = 39.3 bits (90), Expect(2) = 8e-06
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -1

Query: 171 SDESLIKRGRSGDIFMGQLFGLGPVVVKRI 82
           SD +LIK G SGD+F G L G  PVV+KRI
Sbjct: 523 SDANLIKHGHSGDLFRGILEGGSPVVIKRI 552



 Score = 37.7 bits (86), Expect(2) = 8e-06
 Identities = 17/25 (68%), Positives = 22/25 (88%)
 Frame = -2

Query: 77  EAFSIELDFFSRISHHSRFVPLLGH 3
           EA+ +ELDFFS++S H+R VPLLGH
Sbjct: 560 EAYLLELDFFSKVS-HTRVVPLLGH 583


>gb|ALK28647.1| zinc finger protein 36 C3H type-like 3 [Acomys percivali]
          Length = 762

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 29/65 (44%), Positives = 35/65 (53%)
 Frame = +2

Query: 329 ARFRSSGCGSIGPRGAASFGPTWDTNVGPRGDASVCSTGGASVDSTGAASFGQTGGASVG 508
           A F   G  + GP GAA+FGP      GP G A+    G A+    GAA+FG  G A+ G
Sbjct: 472 AAFGPGGAAAFGPIGAAAFGPIGAAAFGPVGAAAFGPVGAAAFGPVGAAAFGPVGAAAFG 531

Query: 509 PTGAA 523
           P GAA
Sbjct: 532 PGGAA 536


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