BLASTX nr result

ID: Rehmannia31_contig00021164 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00021164
         (385 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011086094.1| helicase-like transcription factor CHR28 iso...    59   2e-07
ref|XP_011096268.1| helicase-like transcription factor CHR28 iso...    57   1e-06
ref|XP_020553861.1| helicase-like transcription factor CHR28 iso...    57   1e-06
ref|XP_011096269.1| helicase-like transcription factor CHR28 iso...    57   1e-06
ref|XP_020553860.1| helicase-like transcription factor CHR28 iso...    55   5e-06

>ref|XP_011086094.1| helicase-like transcription factor CHR28 isoform X1 [Sesamum
           indicum]
          Length = 1260

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 26/56 (46%), Positives = 37/56 (66%)
 Frame = -1

Query: 169 MMMVEADEGSPEIMDELFSGEDDYGDVLLDLDFLWKAPDPPQGGRSDDLPFVDALK 2
           M+MVE DEGSP IMD++F+ E++Y DVLLD++  W+   PP G     +   + LK
Sbjct: 1   MLMVETDEGSPVIMDQIFTLEEEYEDVLLDVEAFWRFVGPPPGSEGSRVEDTNGLK 56


>ref|XP_011096268.1| helicase-like transcription factor CHR28 isoform X4 [Sesamum
           indicum]
          Length = 1326

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
 Frame = -1

Query: 172 EMMMVEADEGSPEIMDELFSGEDDYGDVLLDLDFLWKAPDPP----QGGRSDDLPFVDAL 5
           EMM    D+GS  IMDELFS +D+  DVL+DL+  W+    P    QG   +DLPF ++L
Sbjct: 6   EMMTANVDDGSSAIMDELFSADDECNDVLIDLESFWRVMGAPAEASQGTVFEDLPFTNSL 65

Query: 4   K 2
           +
Sbjct: 66  Q 66


>ref|XP_020553861.1| helicase-like transcription factor CHR28 isoform X3 [Sesamum
           indicum]
          Length = 1336

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
 Frame = -1

Query: 172 EMMMVEADEGSPEIMDELFSGEDDYGDVLLDLDFLWKAPDPP----QGGRSDDLPFVDAL 5
           EMM    D+GS  IMDELFS +D+  DVL+DL+  W+    P    QG   +DLPF ++L
Sbjct: 6   EMMTANVDDGSSAIMDELFSADDECNDVLIDLESFWRVMGAPAEASQGTVFEDLPFTNSL 65

Query: 4   K 2
           +
Sbjct: 66  Q 66


>ref|XP_011096269.1| helicase-like transcription factor CHR28 isoform X1 [Sesamum
           indicum]
          Length = 1362

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
 Frame = -1

Query: 172 EMMMVEADEGSPEIMDELFSGEDDYGDVLLDLDFLWKAPDPP----QGGRSDDLPFVDAL 5
           EMM    D+GS  IMDELFS +D+  DVL+DL+  W+    P    QG   +DLPF ++L
Sbjct: 6   EMMTANVDDGSSAIMDELFSADDECNDVLIDLESFWRVMGAPAEASQGTVFEDLPFTNSL 65

Query: 4   K 2
           +
Sbjct: 66  Q 66


>ref|XP_020553860.1| helicase-like transcription factor CHR28 isoform X2 [Sesamum
           indicum]
          Length = 1356

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
 Frame = -1

Query: 169 MMMVEADEGSPEIMDELFSGEDDYGDVLLDLDFLWKAPDPP----QGGRSDDLPFVDALK 2
           MM    D+GS  IMDELFS +D+  DVL+DL+  W+    P    QG   +DLPF ++L+
Sbjct: 1   MMTANVDDGSSAIMDELFSADDECNDVLIDLESFWRVMGAPAEASQGTVFEDLPFTNSLQ 60


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