BLASTX nr result

ID: Rehmannia31_contig00021133 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00021133
         (700 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN21915.1| Nuclear porin [Handroanthus impetiginosus]              92   2e-17
ref|XP_012843543.1| PREDICTED: nuclear pore complex protein NUP6...    89   2e-16
ref|XP_012843542.1| PREDICTED: nuclear pore complex protein NUP6...    89   2e-16
ref|XP_020550604.1| LOW QUALITY PROTEIN: nuclear pore complex pr...    89   2e-16

>gb|PIN21915.1| Nuclear porin [Handroanthus impetiginosus]
          Length = 803

 Score = 91.7 bits (226), Expect = 2e-17
 Identities = 54/99 (54%), Positives = 60/99 (60%)
 Frame = -2

Query: 297 PFGASPLFXXXXXXXAPTPSIFGSSSGPAPTQNLFXXXXXXXXXATSIFGSGSGPAPSIF 118
           PFGASPLF       APT  +FGSSSG AP  NLF          T++FGS S PAP++F
Sbjct: 70  PFGASPLFGSSSGGAAPTTGLFGSSSGTAPATNLF----GPSSSGTNLFGSASTPAPNVF 125

Query: 117 GSSSGGAPTXXXXXXXXXXXGQTASPFGSTISTPAPQSP 1
           GS+SGGAPT           GQTASPFGST S  AP SP
Sbjct: 126 GSASGGAPT-SGLFGSSSGAGQTASPFGSTASAAAPASP 163


>ref|XP_012843543.1| PREDICTED: nuclear pore complex protein NUP62 isoform X2
           [Erythranthe guttata]
          Length = 823

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 51/83 (61%), Positives = 56/83 (67%)
 Frame = -2

Query: 249 PTPSIFGSSSGPAPTQNLFXXXXXXXXXATSIFGSGSGPAPSIFGSSSGGAPTXXXXXXX 70
           PT S+FGSSSG APTQNLF         A+++FGSGSGPA S+FGSSSGGAPT       
Sbjct: 149 PTSSLFGSSSGTAPTQNLFGSSTSAAPPASNLFGSGSGPALSMFGSSSGGAPT-SSLFGS 207

Query: 69  XXXXGQTASPFGSTISTPAPQSP 1
               GQT SPFGST ST AP SP
Sbjct: 208 SSGAGQTPSPFGSTPSTVAPSSP 230


>ref|XP_012843542.1| PREDICTED: nuclear pore complex protein NUP62 isoform X1
           [Erythranthe guttata]
 gb|EYU31925.1| hypothetical protein MIMGU_mgv1a001392mg [Erythranthe guttata]
          Length = 826

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 51/83 (61%), Positives = 56/83 (67%)
 Frame = -2

Query: 249 PTPSIFGSSSGPAPTQNLFXXXXXXXXXATSIFGSGSGPAPSIFGSSSGGAPTXXXXXXX 70
           PT S+FGSSSG APTQNLF         A+++FGSGSGPA S+FGSSSGGAPT       
Sbjct: 149 PTSSLFGSSSGTAPTQNLFGSSTSAAPPASNLFGSGSGPALSMFGSSSGGAPT-SSLFGS 207

Query: 69  XXXXGQTASPFGSTISTPAPQSP 1
               GQT SPFGST ST AP SP
Sbjct: 208 SSGAGQTPSPFGSTPSTVAPSSP 230


>ref|XP_020550604.1| LOW QUALITY PROTEIN: nuclear pore complex protein NUP62 [Sesamum
           indicum]
          Length = 1172

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 53/99 (53%), Positives = 57/99 (57%)
 Frame = -2

Query: 297 PFGASPLFXXXXXXXAPTPSIFGSSSGPAPTQNLFXXXXXXXXXATSIFGSGSGPAPSIF 118
           PFGASPLF        PT S+FGSSSG   T N           A+S FGSGSG +PSIF
Sbjct: 188 PFGASPLFGSSSSAA-PTSSLFGSSSGTTTTLNPLGSSSSGSPPASSFFGSGSGLSPSIF 246

Query: 117 GSSSGGAPTXXXXXXXXXXXGQTASPFGSTISTPAPQSP 1
           GS+SGGAPT           GQT SPFGS  ST AP SP
Sbjct: 247 GSTSGGAPTSSIFGSSAPGTGQTTSPFGSNSSTAAPSSP 285


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