BLASTX nr result

ID: Rehmannia31_contig00021028 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00021028
         (392 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019081923.1| PREDICTED: formin-like protein 4 isoform X2 ...    51   2e-08

>ref|XP_019081923.1| PREDICTED: formin-like protein 4 isoform X2 [Vitis vinifera]
          Length = 356

 Score = 51.2 bits (121), Expect(2) = 2e-08
 Identities = 32/76 (42%), Positives = 42/76 (55%)
 Frame = -2

Query: 232 ISLF*ETHYNNEKGWIGEKAESVYREMFQLRDEIRESECEADFGDDGHNADDVEIADRVC 53
           + LF  THYN  KGWI + A+S Y EM +L+++  +        D      D+EI  RV 
Sbjct: 243 VELFRATHYNESKGWINDTAKSRYEEMRKLQEQSTQ--------DGDTPISDLEITQRV- 293

Query: 52  DQILGHRAGGYIRGLG 5
              LG R+ GYIRGLG
Sbjct: 294 ---LGKRS-GYIRGLG 305



 Score = 34.7 bits (78), Expect(2) = 2e-08
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = -3

Query: 390 HDYYKKFAHLPWDDRVKQMREKLCD--SQEDWEYLCRLFETDEFKGDDPSYKKTELAFFK 217
           H ++K+F      + V++ R    D  +QEDW+YLC LF  ++FK       + E+  F+
Sbjct: 194 HQHFKQF------ETVEEARLHPPDDVTQEDWDYLCNLFSLEKFKSVATGELQGEVELFR 247


Top