BLASTX nr result

ID: Rehmannia31_contig00020775 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00020775
         (490 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020264198.1| rho GDP-dissociation inhibitor 1 [Asparagus ...    46   3e-06
ref|XP_011095960.1| rho GDP-dissociation inhibitor 1 [Sesamum in...    45   7e-06
ref|XP_010928514.1| PREDICTED: rho GDP-dissociation inhibitor 1 ...    45   9e-06

>ref|XP_020264198.1| rho GDP-dissociation inhibitor 1 [Asparagus officinalis]
 ref|XP_020264199.1| rho GDP-dissociation inhibitor 1 [Asparagus officinalis]
 gb|ONK69246.1| uncharacterized protein A4U43_C05F20850 [Asparagus officinalis]
          Length = 249

 Score = 45.8 bits (107), Expect(2) = 3e-06
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
 Frame = +3

Query: 117 NNRQMSESSICXXXXXXXXXXXKIQRIV*ERQVF----FCDVNYDDESLRSWKEQLLGSL 284
           +NR MSE+S             K+ +++     F      + + DDESLR WKEQLLGS+
Sbjct: 42  HNRTMSETSNYGTEEEDEGEEGKVSKLIDLGPQFSLRQHIEKDKDDESLRRWKEQLLGSV 101

Query: 285 DINSVG 302
           D+NSVG
Sbjct: 102 DLNSVG 107



 Score = 32.7 bits (73), Expect(2) = 3e-06
 Identities = 17/22 (77%), Positives = 19/22 (86%), Gaps = 1/22 (4%)
 Frame = +2

Query: 53  MSLAVGVTSS-SKDMGVDDNKE 115
           MSLAVG  SS SKDMG+D+NKE
Sbjct: 1   MSLAVGAPSSCSKDMGLDENKE 22


>ref|XP_011095960.1| rho GDP-dissociation inhibitor 1 [Sesamum indicum]
          Length = 251

 Score = 44.7 bits (104), Expect(2) = 7e-06
 Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
 Frame = +3

Query: 120 NRQMSESSICXXXXXXXXXXX-KIQRIV*ERQVFFCDVNYDDESLRSWKEQLLGSLDINS 296
           +RQMSE+S+C            KI+           + + DDESLR WKEQLLGS+D+NS
Sbjct: 50  SRQMSENSLCTTEDEEDEDTEAKIELGPQCTLKELSEKDKDDESLRRWKEQLLGSVDMNS 109

Query: 297 VG 302
           VG
Sbjct: 110 VG 111



 Score = 32.7 bits (73), Expect(2) = 7e-06
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = +2

Query: 53  MSLAVGVTSSSKDMGVDDNK 112
           MSLAVG  SSSK MG D+NK
Sbjct: 1   MSLAVGAVSSSKSMGFDENK 20


>ref|XP_010928514.1| PREDICTED: rho GDP-dissociation inhibitor 1 [Elaeis guineensis]
          Length = 261

 Score = 45.4 bits (106), Expect(2) = 9e-06
 Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
 Frame = +3

Query: 120 NRQMSESSICXXXXXXXXXXXKIQRIV*ERQVFFCDV---NYDDESLRSWKEQLLGSLDI 290
           NRQMSE+S+            + + I    +V   D    + DDESLR WKEQLLGS+D+
Sbjct: 56  NRQMSEASLYATEDDDGEDGKEAKGIDLGPKVSLKDQLEKDKDDESLRRWKEQLLGSVDL 115

Query: 291 NSVGGN 308
           +SVG N
Sbjct: 116 SSVGEN 121



 Score = 31.6 bits (70), Expect(2) = 9e-06
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +2

Query: 53  MSLAVGVTSSSKDMGVDDNKE 115
           MSLAVG  SSSK MG  +NKE
Sbjct: 1   MSLAVGARSSSKTMGFQENKE 21


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