BLASTX nr result
ID: Rehmannia31_contig00020419
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00020419
(414 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011083632.1| transcription initiation factor IIF subunit ... 100 5e-23
ref|XP_012842773.1| PREDICTED: general transcription factor IIF ... 97 7e-22
ref|XP_011074628.1| transcription initiation factor IIF subunit ... 96 3e-21
ref|XP_012071957.1| general transcription factor IIF subunit 2 [... 92 4e-20
ref|XP_020551085.1| general transcription factor IIF subunit 2 i... 92 5e-20
ref|XP_022015660.1| transcription initiation factor IIF subunit ... 92 6e-20
ref|XP_021636725.1| general transcription factor IIF subunit 2 [... 92 6e-20
gb|KVH98411.1| Transcription Factor IIF, Rap30/Rap74, interactio... 90 9e-20
gb|PNT38327.1| hypothetical protein POPTR_005G233800v3 [Populus ... 88 2e-19
gb|KJB14454.1| hypothetical protein B456_002G125800 [Gossypium r... 89 6e-19
ref|XP_021611532.1| transcription initiation factor IIF subunit ... 89 7e-19
ref|XP_023767168.1| transcription initiation factor IIF subunit ... 89 8e-19
ref|XP_012466190.1| PREDICTED: transcription initiation factor I... 89 9e-19
ref|XP_016707821.1| PREDICTED: transcription initiation factor I... 89 9e-19
ref|XP_011045166.1| PREDICTED: transcription initiation factor I... 89 9e-19
gb|PPD76378.1| hypothetical protein GOBAR_DD26698 [Gossypium bar... 89 1e-18
gb|OMO87482.1| Transcription initiation factor IIF, beta subunit... 88 2e-18
gb|PNT38324.1| hypothetical protein POPTR_005G233800v3 [Populus ... 88 2e-18
ref|XP_017642320.1| PREDICTED: transcription initiation factor I... 88 2e-18
ref|XP_002307692.1| hypothetical protein POPTR_0005s25520g [Popu... 88 2e-18
>ref|XP_011083632.1| transcription initiation factor IIF subunit beta isoform X2
[Sesamum indicum]
Length = 259
Score = 100 bits (248), Expect = 5e-23
Identities = 52/85 (61%), Positives = 59/85 (69%)
Frame = +2
Query: 158 AKADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAG 337
AKA+RSVWLMKCPP+ LDPLRAEDPS+L+FTMEMAG
Sbjct: 15 AKAERSVWLMKCPPVVSKAWQSSSAAAEAPPVAKVVVS--LDPLRAEDPSALQFTMEMAG 72
Query: 338 SEIMQIPKSYSLNMFKDFVPMGVFS 412
SE++Q+PKSYSLNMFKDFVPM VFS
Sbjct: 73 SEVVQMPKSYSLNMFKDFVPMCVFS 97
>ref|XP_012842773.1| PREDICTED: general transcription factor IIF subunit 2-like
[Erythranthe guttata]
gb|EYU32878.1| hypothetical protein MIMGU_mgv1a012129mg [Erythranthe guttata]
Length = 260
Score = 97.1 bits (240), Expect = 7e-22
Identities = 50/85 (58%), Positives = 58/85 (68%)
Frame = +2
Query: 158 AKADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAG 337
AK+DRS+WLMKCPP+ LDPLR E+PSSL+FTMEMAG
Sbjct: 16 AKSDRSIWLMKCPPVVSKAWKSAAAESPPVAKVVVS----LDPLRPEEPSSLQFTMEMAG 71
Query: 338 SEIMQIPKSYSLNMFKDFVPMGVFS 412
SEI+Q+PKS+SLNMFKDFVPM VFS
Sbjct: 72 SEIVQMPKSFSLNMFKDFVPMTVFS 96
>ref|XP_011074628.1| transcription initiation factor IIF subunit beta [Sesamum indicum]
Length = 260
Score = 95.5 bits (236), Expect = 3e-21
Identities = 48/85 (56%), Positives = 58/85 (68%)
Frame = +2
Query: 158 AKADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAG 337
AKADRS+WLMKCPP+ LDPL++EDPS+L+FTMEMAG
Sbjct: 16 AKADRSIWLMKCPPVVSKAWQSSAASGDSPPLAKVVVS--LDPLQSEDPSALQFTMEMAG 73
Query: 338 SEIMQIPKSYSLNMFKDFVPMGVFS 412
+E++ +PKSYSLNMFKDFVPM VFS
Sbjct: 74 NEVVNMPKSYSLNMFKDFVPMCVFS 98
>ref|XP_012071957.1| general transcription factor IIF subunit 2 [Jatropha curcas]
dbj|BAJ53176.1| JHL18I08.10 [Jatropha curcas]
gb|KDP38577.1| hypothetical protein JCGZ_04502 [Jatropha curcas]
Length = 262
Score = 92.4 bits (228), Expect = 4e-20
Identities = 50/85 (58%), Positives = 56/85 (65%)
Frame = +2
Query: 158 AKADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAG 337
AKADRSVWLMKCP + LDPLR++DPS+L+FTMEMAG
Sbjct: 18 AKADRSVWLMKCPLVVAKSWQSHASSSDSHPVAKVVLS--LDPLRSDDPSALQFTMEMAG 75
Query: 338 SEIMQIPKSYSLNMFKDFVPMGVFS 412
+EI IPKSYSLNMFKDFVPM VFS
Sbjct: 76 NEIGNIPKSYSLNMFKDFVPMCVFS 100
>ref|XP_020551085.1| general transcription factor IIF subunit 2 isoform X1 [Sesamum
indicum]
Length = 268
Score = 92.4 bits (228), Expect = 5e-20
Identities = 52/94 (55%), Positives = 59/94 (62%), Gaps = 9/94 (9%)
Frame = +2
Query: 158 AKADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLK------- 316
AKA+RSVWLMKCPP+ LDPLRAEDPS+L+
Sbjct: 15 AKAERSVWLMKCPPVVSKAWQSSSAAAEAPPVAKVVVS--LDPLRAEDPSALQVKQLFSS 72
Query: 317 --FTMEMAGSEIMQIPKSYSLNMFKDFVPMGVFS 412
FTMEMAGSE++Q+PKSYSLNMFKDFVPM VFS
Sbjct: 73 LYFTMEMAGSEVVQMPKSYSLNMFKDFVPMCVFS 106
>ref|XP_022015660.1| transcription initiation factor IIF subunit beta-like [Helianthus
annuus]
gb|OTF90604.1| putative transcription initiation factor IIF, beta subunit
[Helianthus annuus]
Length = 259
Score = 92.0 bits (227), Expect = 6e-20
Identities = 48/84 (57%), Positives = 55/84 (65%)
Frame = +2
Query: 161 KADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAGS 340
+ADRSVWLMKCP I LDPLR EDPSSL+F+MEMAGS
Sbjct: 17 RADRSVWLMKCPVIVAKSWNNIPPDSQQNLAKVVVS---LDPLRPEDPSSLQFSMEMAGS 73
Query: 341 EIMQIPKSYSLNMFKDFVPMGVFS 412
E + +PKSY+LNMFKDFVPMG+FS
Sbjct: 74 ETVNMPKSYALNMFKDFVPMGIFS 97
>ref|XP_021636725.1| general transcription factor IIF subunit 2 [Hevea brasiliensis]
Length = 262
Score = 92.0 bits (227), Expect = 6e-20
Identities = 50/85 (58%), Positives = 53/85 (62%)
Frame = +2
Query: 158 AKADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAG 337
AKADRSVWLMKCP + LDPLR ED S L+FTMEMAG
Sbjct: 18 AKADRSVWLMKCPLVVAKSWQSHSSSSDSHPLAKVVLS--LDPLRGEDSSGLQFTMEMAG 75
Query: 338 SEIMQIPKSYSLNMFKDFVPMGVFS 412
SE +PKSYSLNMFKDFVPMGVFS
Sbjct: 76 SETGNVPKSYSLNMFKDFVPMGVFS 100
>gb|KVH98411.1| Transcription Factor IIF, Rap30/Rap74, interaction [Cynara
cardunculus var. scolymus]
Length = 194
Score = 90.1 bits (222), Expect = 9e-20
Identities = 48/85 (56%), Positives = 54/85 (63%)
Frame = +2
Query: 158 AKADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAG 337
A+ADRSVWLMKCP + LDPL EDPSSL+F+MEMAG
Sbjct: 13 ARADRSVWLMKCPVVVAKSWQSVPADSQQNLSKVVVS---LDPLHPEDPSSLQFSMEMAG 69
Query: 338 SEIMQIPKSYSLNMFKDFVPMGVFS 412
SEI +PKSYSLNMFKDFVPM +FS
Sbjct: 70 SEIANMPKSYSLNMFKDFVPMCIFS 94
>gb|PNT38327.1| hypothetical protein POPTR_005G233800v3 [Populus trichocarpa]
Length = 133
Score = 87.8 bits (216), Expect = 2e-19
Identities = 44/85 (51%), Positives = 54/85 (63%)
Frame = +2
Query: 158 AKADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAG 337
+KAD+SVWLMKCP + LDPL+++DPS+L+FTMEMA
Sbjct: 15 SKADKSVWLMKCPVVVAKSWKTHTSPSSSDSAPLAKVVLSLDPLQSDDPSALQFTMEMAR 74
Query: 338 SEIMQIPKSYSLNMFKDFVPMGVFS 412
+E +PKSYSLNMFKDFVPM VFS
Sbjct: 75 TEAGNVPKSYSLNMFKDFVPMCVFS 99
>gb|KJB14454.1| hypothetical protein B456_002G125800 [Gossypium raimondii]
Length = 237
Score = 89.0 bits (219), Expect = 6e-19
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +2
Query: 161 KADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAGS 340
KADRSVWLMKCP + LDP + +DPSS++FTMEMAGS
Sbjct: 15 KADRSVWLMKCP-VVVAKSWKSQTASSSDSQPVAKVVLSLDPRKPDDPSSMQFTMEMAGS 73
Query: 341 EIMQIPKSYSLNMFKDFVPMGVFS 412
EI IPKSY+LNMFKDFVPM VFS
Sbjct: 74 EIGNIPKSYALNMFKDFVPMSVFS 97
>ref|XP_021611532.1| transcription initiation factor IIF subunit beta [Manihot
esculenta]
gb|OAY50650.1| hypothetical protein MANES_05G153300 [Manihot esculenta]
Length = 262
Score = 89.4 bits (220), Expect = 7e-19
Identities = 49/85 (57%), Positives = 53/85 (62%)
Frame = +2
Query: 158 AKADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAG 337
AKADRSVWLMKCP + LDPLR+EDPS+L+FTMEMAG
Sbjct: 18 AKADRSVWLMKCPLVVAKSWQSQPSSSDSHPLSKVVLS--LDPLRSEDPSALQFTMEMAG 75
Query: 338 SEIMQIPKSYSLNMFKDFVPMGVFS 412
SE IPKSY LNM KDFVPM VFS
Sbjct: 76 SETSNIPKSYILNMSKDFVPMSVFS 100
>ref|XP_023767168.1| transcription initiation factor IIF subunit beta [Lactuca sativa]
gb|PLY82966.1| hypothetical protein LSAT_1X16480 [Lactuca sativa]
Length = 256
Score = 89.0 bits (219), Expect = 8e-19
Identities = 47/85 (55%), Positives = 53/85 (62%)
Frame = +2
Query: 158 AKADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAG 337
A+ADRSVWLMKCP + LDPL EDPSSL+F+MEMAG
Sbjct: 12 ARADRSVWLMKCPLVVAKSWQAIPPDSQQNLSKVVVS---LDPLHPEDPSSLQFSMEMAG 68
Query: 338 SEIMQIPKSYSLNMFKDFVPMGVFS 412
EI +PKSYSLNMFKDFVPM +FS
Sbjct: 69 GEIANVPKSYSLNMFKDFVPMCIFS 93
>ref|XP_012466190.1| PREDICTED: transcription initiation factor IIF subunit beta-like
[Gossypium raimondii]
gb|KJB14456.1| hypothetical protein B456_002G125800 [Gossypium raimondii]
gb|KJB14457.1| hypothetical protein B456_002G125800 [Gossypium raimondii]
Length = 259
Score = 89.0 bits (219), Expect = 9e-19
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +2
Query: 161 KADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAGS 340
KADRSVWLMKCP + LDP + +DPSS++FTMEMAGS
Sbjct: 15 KADRSVWLMKCP-VVVAKSWKSQTASSSDSQPVAKVVLSLDPRKPDDPSSMQFTMEMAGS 73
Query: 341 EIMQIPKSYSLNMFKDFVPMGVFS 412
EI IPKSY+LNMFKDFVPM VFS
Sbjct: 74 EIGNIPKSYALNMFKDFVPMSVFS 97
>ref|XP_016707821.1| PREDICTED: transcription initiation factor IIF subunit beta-like
[Gossypium hirsutum]
Length = 261
Score = 89.0 bits (219), Expect = 9e-19
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +2
Query: 161 KADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAGS 340
KADRSVWLMKCP + LDP + +DPSS++FTMEMAGS
Sbjct: 15 KADRSVWLMKCP-VVVAKSWKSQTASSSDSQPVAKVVLSLDPRKPDDPSSMQFTMEMAGS 73
Query: 341 EIMQIPKSYSLNMFKDFVPMGVFS 412
EI IPKSY+LNMFKDFVPM VFS
Sbjct: 74 EIGNIPKSYALNMFKDFVPMSVFS 97
>ref|XP_011045166.1| PREDICTED: transcription initiation factor IIF subunit beta-like
[Populus euphratica]
ref|XP_011014731.1| PREDICTED: transcription initiation factor IIF subunit beta-like
[Populus euphratica]
Length = 261
Score = 89.0 bits (219), Expect = 9e-19
Identities = 45/85 (52%), Positives = 54/85 (63%)
Frame = +2
Query: 158 AKADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAG 337
+KADRSVWLMKCP + LDPL+++DPS+L+FTMEMA
Sbjct: 15 SKADRSVWLMKCPVVVAKSWKNHTSPSSSDSAPLAKVVLSLDPLQSDDPSALQFTMEMAR 74
Query: 338 SEIMQIPKSYSLNMFKDFVPMGVFS 412
+E +PKSYSLNMFKDFVPM VFS
Sbjct: 75 TETGNVPKSYSLNMFKDFVPMCVFS 99
>gb|PPD76378.1| hypothetical protein GOBAR_DD26698 [Gossypium barbadense]
Length = 292
Score = 89.0 bits (219), Expect = 1e-18
Identities = 47/84 (55%), Positives = 53/84 (63%)
Frame = +2
Query: 161 KADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAGS 340
KADRSVWLMKCP + LDP + +DPSS++FTMEMAGS
Sbjct: 15 KADRSVWLMKCP-VVVAKSWKSQTASSSDSQPVAKVVLSLDPRKPDDPSSMQFTMEMAGS 73
Query: 341 EIMQIPKSYSLNMFKDFVPMGVFS 412
EI IPKSY+LNMFKDFVPM VFS
Sbjct: 74 EIGNIPKSYALNMFKDFVPMSVFS 97
>gb|OMO87482.1| Transcription initiation factor IIF, beta subunit [Corchorus
capsularis]
Length = 259
Score = 88.2 bits (217), Expect = 2e-18
Identities = 47/84 (55%), Positives = 54/84 (64%)
Frame = +2
Query: 161 KADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAGS 340
KAD+SVWLMKCP + LDPL+A+DPSSL+FTMEMAGS
Sbjct: 15 KADKSVWLMKCP-VVVAKSWKNRPASSSDSQPLAKVVLSLDPLKADDPSSLEFTMEMAGS 73
Query: 341 EIMQIPKSYSLNMFKDFVPMGVFS 412
E+ IPKSYSLNM KDFVPM +FS
Sbjct: 74 EMGSIPKSYSLNMSKDFVPMCIFS 97
>gb|PNT38324.1| hypothetical protein POPTR_005G233800v3 [Populus trichocarpa]
Length = 241
Score = 87.8 bits (216), Expect = 2e-18
Identities = 44/85 (51%), Positives = 54/85 (63%)
Frame = +2
Query: 158 AKADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAG 337
+KAD+SVWLMKCP + LDPL+++DPS+L+FTMEMA
Sbjct: 15 SKADKSVWLMKCPVVVAKSWKTHTSPSSSDSAPLAKVVLSLDPLQSDDPSALQFTMEMAR 74
Query: 338 SEIMQIPKSYSLNMFKDFVPMGVFS 412
+E +PKSYSLNMFKDFVPM VFS
Sbjct: 75 TEAGNVPKSYSLNMFKDFVPMCVFS 99
>ref|XP_017642320.1| PREDICTED: transcription initiation factor IIF subunit beta-like
[Gossypium arboreum]
gb|KHG00115.1| Transcription initiation factor IIF subunit beta [Gossypium
arboreum]
Length = 259
Score = 87.8 bits (216), Expect = 2e-18
Identities = 46/84 (54%), Positives = 53/84 (63%)
Frame = +2
Query: 161 KADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAGS 340
KADRSVWLMKCP + LDP + +DPSS++FTMEMAGS
Sbjct: 15 KADRSVWLMKCP-VVVAKPWKSQTSSSSDSQPVAKVVLSLDPRKPDDPSSMQFTMEMAGS 73
Query: 341 EIMQIPKSYSLNMFKDFVPMGVFS 412
EI +PKSY+LNMFKDFVPM VFS
Sbjct: 74 EIGNMPKSYALNMFKDFVPMSVFS 97
>ref|XP_002307692.1| hypothetical protein POPTR_0005s25520g [Populus trichocarpa]
gb|ABK92486.1| unknown [Populus trichocarpa]
gb|PNT38325.1| hypothetical protein POPTR_005G233800v3 [Populus trichocarpa]
Length = 261
Score = 87.8 bits (216), Expect = 2e-18
Identities = 44/85 (51%), Positives = 54/85 (63%)
Frame = +2
Query: 158 AKADRSVWLMKCPPIXXXXXXXXXXXXXXXXXXXXXXXXXLDPLRAEDPSSLKFTMEMAG 337
+KAD+SVWLMKCP + LDPL+++DPS+L+FTMEMA
Sbjct: 15 SKADKSVWLMKCPVVVAKSWKTHTSPSSSDSAPLAKVVLSLDPLQSDDPSALQFTMEMAR 74
Query: 338 SEIMQIPKSYSLNMFKDFVPMGVFS 412
+E +PKSYSLNMFKDFVPM VFS
Sbjct: 75 TEAGNVPKSYSLNMFKDFVPMCVFS 99