BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00019654
         (1345 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011081724.1| RNA polymerase sigma factor sigC isoform X2 ...   579   0.0  
ref|XP_020550776.1| RNA polymerase sigma factor sigC isoform X1 ...   566   0.0  
ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC ...   561   0.0  
gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythra...   538   0.0  
ref|XP_022872057.1| RNA polymerase sigma factor sigC [Olea europ...   485   e-165
gb|KZV42013.1| RNA polymerase sigma factor sigC-like [Dorcoceras...   449   e-152
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC ...   428   e-142
ref|XP_015167787.1| PREDICTED: RNA polymerase sigma factor sigC ...   428   e-142
ref|XP_015085648.1| PREDICTED: RNA polymerase sigma factor sigC ...   426   e-142
ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC ...   426   e-141
ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC ...   426   e-141
ref|XP_019070929.1| PREDICTED: RNA polymerase sigma factor sigC ...   423   e-141
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC ...   423   e-141
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ...   423   e-140
ref|XP_016487978.1| PREDICTED: RNA polymerase sigma factor sigC-...   423   e-140
ref|XP_019263762.1| PREDICTED: RNA polymerase sigma factor sigC ...   422   e-140
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ...   420   e-139
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   420   e-138
ref|XP_017983625.1| PREDICTED: RNA polymerase sigma factor sigC ...   414   e-137
gb|PIN16833.1| hypothetical protein CDL12_10487 [Handroanthus im...   408   e-137

>ref|XP_011081724.1| RNA polymerase sigma factor sigC isoform X2 [Sesamum indicum]
          Length = 556

 Score =  579 bits (1493), Expect = 0.0
 Identities = 302/382 (79%), Positives = 336/382 (87%)
 Frame = -1

Query: 1345 ALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNA 1166
            A+GKGSSDGL SLL+  I+TSN++DKLAYLTSLQATQ SQF+LLMKNLD+LEDMFSDSN 
Sbjct: 85   AVGKGSSDGLSSLLEKHIETSNSEDKLAYLTSLQATQLSQFRLLMKNLDMLEDMFSDSNV 144

Query: 1165 VRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKV 986
            VRLERDILEQLERLGALRLF+SCLSRTLKSS S DLSNA  E+VEE +VNDSVDNHV +V
Sbjct: 145  VRLERDILEQLERLGALRLFYSCLSRTLKSSTSFDLSNATTELVEEPKVNDSVDNHVGEV 204

Query: 985  FIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIA 806
             ++SG                S I  QEL + TIS+   Q K+ S  R SRSRNKRQ+IA
Sbjct: 205  -VRSGRKELRKLRRKRMLDKESGITTQELPTVTISK---QHKYASARRASRSRNKRQRIA 260

Query: 805  RNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDE 626
            RNEAEMS+GVK+VAELEK+RTILEEETGQ+ASLSSWAEAAGIKKKELQQ+L+YGWHCRDE
Sbjct: 261  RNEAEMSSGVKLVAELEKVRTILEEETGQVASLSSWAEAAGIKKKELQQNLHYGWHCRDE 320

Query: 625  LLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKS 446
            LLRSTRSLV+FIA+NYWGLGVAFEDL+QAGN+GVLQGAERFDQ+RGYKFSTYVQYWIRKS
Sbjct: 321  LLRSTRSLVLFIARNYWGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQYWIRKS 380

Query: 445  MSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSAS 266
            MSTLVARHARGVR+PCTLSKVINQVQ+ARK LSTS GKYPDDS+IAK+TGLS+AKIMSAS
Sbjct: 381  MSTLVARHARGVRIPCTLSKVINQVQRARKALSTSNGKYPDDSDIAKYTGLSIAKIMSAS 440

Query: 265  KCLRVVRSIDQKIGEGINIKYM 200
            KCLRVV SIDQKIGE I+ KYM
Sbjct: 441  KCLRVVGSIDQKIGEAISAKYM 462


>ref|XP_020550776.1| RNA polymerase sigma factor sigC isoform X1 [Sesamum indicum]
          Length = 578

 Score =  567 bits (1460), Expect = 0.0
 Identities = 302/404 (74%), Positives = 336/404 (83%), Gaps = 22/404 (5%)
 Frame = -1

Query: 1345 ALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNA 1166
            A+GKGSSDGL SLL+  I+TSN++DKLAYLTSLQATQ SQF+LLMKNLD+LEDMFSDSN 
Sbjct: 85   AVGKGSSDGLSSLLEKHIETSNSEDKLAYLTSLQATQLSQFRLLMKNLDMLEDMFSDSNV 144

Query: 1165 VRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKV 986
            VRLERDILEQLERLGALRLF+SCLSRTLKSS S DLSNA  E+VEE +VNDSVDNHV +V
Sbjct: 145  VRLERDILEQLERLGALRLFYSCLSRTLKSSTSFDLSNATTELVEEPKVNDSVDNHVGEV 204

Query: 985  FIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIA 806
             ++SG                S I  QEL + TIS+   Q K+ S  R SRSRNKRQ+IA
Sbjct: 205  -VRSGRKELRKLRRKRMLDKESGITTQELPTVTISK---QHKYASARRASRSRNKRQRIA 260

Query: 805  RNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDE 626
            RNEAEMS+GVK+VAELEK+RTILEEETGQ+ASLSSWAEAAGIKKKELQQ+L+YGWHCRDE
Sbjct: 261  RNEAEMSSGVKLVAELEKVRTILEEETGQVASLSSWAEAAGIKKKELQQNLHYGWHCRDE 320

Query: 625  LLRSTRSLVMFIAKNYWGLGVAFEDLVQA----------------------GNMGVLQGA 512
            LLRSTRSLV+FIA+NYWGLGVAFEDL+QA                      GN+GVLQGA
Sbjct: 321  LLRSTRSLVLFIARNYWGLGVAFEDLIQAEYCSHKKPKLEFVLFIEHSWNAGNIGVLQGA 380

Query: 511  ERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGK 332
            ERFDQ+RGYKFSTYVQYWIRKSMSTLVARHARGVR+PCTLSKVINQVQ+ARK LSTS GK
Sbjct: 381  ERFDQSRGYKFSTYVQYWIRKSMSTLVARHARGVRIPCTLSKVINQVQRARKALSTSNGK 440

Query: 331  YPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYM 200
            YPDDS+IAK+TGLS+AKIMSASKCLRVV SIDQKIGE I+ KYM
Sbjct: 441  YPDDSDIAKYTGLSIAKIMSASKCLRVVGSIDQKIGEAISAKYM 484


>ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC [Erythranthe guttata]
          Length = 562

 Score =  561 bits (1445), Expect = 0.0
 Identities = 295/383 (77%), Positives = 324/383 (84%), Gaps = 1/383 (0%)
 Frame = -1

Query: 1345 ALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNA 1166
            ALGKGSSD LYSLLD+DIQ   N+DKL  LTS+QATQAS+ +LLMKNLD+LEDMF+DSNA
Sbjct: 87   ALGKGSSDSLYSLLDSDIQIPKNEDKLENLTSVQATQASKLRLLMKNLDVLEDMFADSNA 146

Query: 1165 VRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEE-RRVNDSVDNHVSK 989
            VRLE DILEQLERLGALRLFHSCLSRT+KS  S DLS+ P EIVEE  RVNDSVDNH+ K
Sbjct: 147  VRLEGDILEQLERLGALRLFHSCLSRTIKSYTSFDLSDGPTEIVEECARVNDSVDNHLGK 206

Query: 988  VFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKI 809
            VF+ SG                S   +QE  S TIS+D QQ KF    RT RSRNKRQK 
Sbjct: 207  VFVHSGKKELRKLRRKRTSDNESPT-IQESPSKTISKDLQQLKFAIAGRTPRSRNKRQKT 265

Query: 808  ARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRD 629
            ARNEA+MS+GVK VAELEK+RT LE+ETGQIASLS+WAEAAGIKKKELQQHL+YGWHCRD
Sbjct: 266  ARNEADMSSGVKRVAELEKIRTKLEQETGQIASLSNWAEAAGIKKKELQQHLHYGWHCRD 325

Query: 628  ELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRK 449
            ELLRST SLV+FIA+NY GLGVAFEDL+QAGN+GVLQGAERFDQ+RGYKFSTYVQYWIRK
Sbjct: 326  ELLRSTHSLVLFIARNYSGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQYWIRK 385

Query: 448  SMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSA 269
            SMSTLVA+HARGVR+PCTLSKVINQV KARK L+TS GKYPDD EIAKFTGLSVAK+MSA
Sbjct: 386  SMSTLVAKHARGVRIPCTLSKVINQVHKARKALTTSNGKYPDDYEIAKFTGLSVAKVMSA 445

Query: 268  SKCLRVVRSIDQKIGEGINIKYM 200
            SKCLRVV SIDQKIGE +  KYM
Sbjct: 446  SKCLRVVGSIDQKIGEYMTTKYM 468


>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythranthe guttata]
          Length = 478

 Score =  538 bits (1385), Expect = 0.0
 Identities = 286/382 (74%), Positives = 314/382 (82%)
 Frame = -1

Query: 1345 ALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNA 1166
            ALGKGSSD LYSLLD+DIQ   N+DKL  LTS+QATQAS+ +LLMKNLD+LEDMF+DSNA
Sbjct: 15   ALGKGSSDSLYSLLDSDIQIPKNEDKLENLTSVQATQASKLRLLMKNLDVLEDMFADSNA 74

Query: 1165 VRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKV 986
            VRLE DILEQLERLGALRLFHSCLSRT+KS  S DLS+ P EIVEE            KV
Sbjct: 75   VRLEGDILEQLERLGALRLFHSCLSRTIKSYTSFDLSDGPTEIVEE-----------CKV 123

Query: 985  FIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIA 806
            F+ SG                S   +QE  S TIS+D QQ KF    RT RSRNKRQK A
Sbjct: 124  FVHSGKKELRKLRRKRTSDNESPT-IQESPSKTISKDLQQLKFAIAGRTPRSRNKRQKTA 182

Query: 805  RNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDE 626
            RNEA+MS+GVK VAELEK+RT LE+ETGQIASLS+WAEAAGIKKKELQQHL+YGWHCRDE
Sbjct: 183  RNEADMSSGVKRVAELEKIRTKLEQETGQIASLSNWAEAAGIKKKELQQHLHYGWHCRDE 242

Query: 625  LLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKS 446
            LLRST SLV+FIA+NY GLGVAFEDL+QAGN+GVLQGAERFDQ+RGYKFSTYVQYWIRKS
Sbjct: 243  LLRSTHSLVLFIARNYSGLGVAFEDLIQAGNIGVLQGAERFDQSRGYKFSTYVQYWIRKS 302

Query: 445  MSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSAS 266
            MSTLVA+HARGVR+PCTLSKVINQV KARK L+TS GKYPDD EIAKFTGLSVAK+MSAS
Sbjct: 303  MSTLVAKHARGVRIPCTLSKVINQVHKARKALTTSNGKYPDDYEIAKFTGLSVAKVMSAS 362

Query: 265  KCLRVVRSIDQKIGEGINIKYM 200
            KCLRVV SIDQKIGE +  KYM
Sbjct: 363  KCLRVVGSIDQKIGEYMTTKYM 384


>ref|XP_022872057.1| RNA polymerase sigma factor sigC [Olea europaea var. sylvestris]
          Length = 558

 Score =  485 bits (1248), Expect = e-165
 Identities = 255/380 (67%), Positives = 303/380 (79%)
 Frame = -1

Query: 1339 GKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAVR 1160
            GK S +GLYSL D++IQ S  +DKL +L SLQAT+AS F LLMKNLD LE MFSDS+ + 
Sbjct: 89   GKQSRNGLYSLSDDNIQMSAEEDKLPFLISLQATEASHFSLLMKNLDKLEKMFSDSDVIT 148

Query: 1159 LERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFI 980
            LERDIL+QL+RLGALRLFH+CLSR LKSS  +DLS+ P+E+VEE R+N+ V +H  KV +
Sbjct: 149  LERDILQQLKRLGALRLFHTCLSRALKSSTLLDLSDGPMELVEETRINEPVTDHEGKVVV 208

Query: 979  QSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARN 800
            QSG                +   + E SS TI  +    K  S  R   +R K+ KI +N
Sbjct: 209  QSGKKEQRRLRRKRALEKGNDSSMLEFSSKTIPGN----KISSRRRHLITRKKKLKITKN 264

Query: 799  EAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELL 620
            EAEMS+GVK+VA+LEK+RT+LEEETGQ+ SL+SWAEAA ++KK LQQ L++GW CRDELL
Sbjct: 265  EAEMSSGVKLVADLEKVRTMLEEETGQVGSLNSWAEAARVEKKTLQQRLHHGWQCRDELL 324

Query: 619  RSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSMS 440
            RSTRSLV+FIAKNY GLGVAFEDL+QAGN GVLQGAERFDQ+RGYKFSTYVQYWIRKSMS
Sbjct: 325  RSTRSLVVFIAKNYRGLGVAFEDLIQAGNFGVLQGAERFDQSRGYKFSTYVQYWIRKSMS 384

Query: 439  TLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSASKC 260
             LVARHARGVR+P  LSKVINQVQKARK+L +S GK+PDD+EIAKFTGLS+AKI SASKC
Sbjct: 385  MLVARHARGVRIPFMLSKVINQVQKARKSLRSSHGKHPDDTEIAKFTGLSIAKITSASKC 444

Query: 259  LRVVRSIDQKIGEGINIKYM 200
            LRVV SIDQK+GEGI+ KY+
Sbjct: 445  LRVVGSIDQKLGEGISAKYL 464


>gb|KZV42013.1| RNA polymerase sigma factor sigC-like [Dorcoceras hygrometricum]
          Length = 464

 Score =  449 bits (1155), Expect = e-152
 Identities = 233/382 (60%), Positives = 292/382 (76%)
 Frame = -1

Query: 1345 ALGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNA 1166
            A+ +GS   LY L  +D+Q  N +    YLTSLQATQ S+FKLL++ LD+LEDM++ ++ 
Sbjct: 2    AIVRGSD--LYGLHYDDVQVVNKEVDSTYLTSLQATQTSRFKLLVETLDMLEDMYAGTDV 59

Query: 1165 VRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKV 986
            VRLE DIL+QLERLGALR FH+CLS T++S         P ++VEE  VNDSV  H SK+
Sbjct: 60   VRLEGDILKQLERLGALRYFHACLSSTVQS--------VPAKLVEEPGVNDSVTGHSSKL 111

Query: 985  FIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIA 806
               +G                +   +QE   +TIS + + PK    IR SRSRNKR K+A
Sbjct: 112  VFSTGRKELRKLRRKRVSENENDSSMQEFGLETISNNIKPPKL---IRQSRSRNKRLKVA 168

Query: 805  RNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDE 626
            +NEAE+S+ VK+VAELEK+R ILE ET ++A+LSSWAEA G++KKEL  HL+YGWHC DE
Sbjct: 169  KNEAELSSSVKLVAELEKIRLILEAETNEVATLSSWAEATGLEKKELLHHLHYGWHCMDE 228

Query: 625  LLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKS 446
            L+RSTRSLV++IA+NY GLGV+F+DL+QAGN+GVL GAERFD++RGYKFSTYVQYWIRKS
Sbjct: 229  LVRSTRSLVLYIARNYRGLGVSFDDLIQAGNLGVLLGAERFDESRGYKFSTYVQYWIRKS 288

Query: 445  MSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSAS 266
            +STL+ARHARG+R+PC+LSK IN +QKARK LS S G +PDD EIAKFTGLS+AKI SAS
Sbjct: 289  ISTLIARHARGIRIPCSLSKGINHIQKARKYLSISNGNHPDDQEIAKFTGLSLAKIKSAS 348

Query: 265  KCLRVVRSIDQKIGEGINIKYM 200
            +CLRVV SIDQK G+GI+IKYM
Sbjct: 349  ECLRVVGSIDQKFGDGISIKYM 370


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Solanum
            tuberosum]
          Length = 555

 Score =  428 bits (1101), Expect = e-142
 Identities = 226/381 (59%), Positives = 283/381 (74%), Gaps = 1/381 (0%)
 Frame = -1

Query: 1339 GKGSSDGLYSLL-DNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 1163
            G+GS   +Y  +  + I  S + +K  YL +   T++  F LLMKNLD+LE+MF+DS   
Sbjct: 86   GRGSPSNVYGDIGSHKIGISPDGEKPTYLNT---TKSLHFSLLMKNLDLLENMFADSEMS 142

Query: 1162 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 983
            RLERDIL QLE+LGAL  FH+CLSRT  SS    + + P E+++E   +D V N + KV 
Sbjct: 143  RLERDILVQLEKLGALEFFHTCLSRTHHSSTFPKVLDVPRELIKEVEKDDLVGNAIDKVV 202

Query: 982  IQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIAR 803
            ++S                 + I   +  +  I  D QQPKF S  RT  SRNKRQKIA+
Sbjct: 203  VRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFYSGKRTQASRNKRQKIAK 262

Query: 802  NEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDEL 623
            NEAEMS GVK+VA+LE++R+ILEEETG++A+ SSWAEAAGI++KELQQ L++GW+CRDEL
Sbjct: 263  NEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEAAGIEQKELQQRLHFGWYCRDEL 322

Query: 622  LRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSM 443
            L+STRSLV+++A+NY GLGVAFEDL+QAGNMGVLQGA RFD TRGYKFSTYVQYWIRKS+
Sbjct: 323  LKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSL 382

Query: 442  STLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSASK 263
            S LVA+HARGVR+P T+ KVINQ+ KARKTLS S GK+P D EIAKFTGLS A+I  ASK
Sbjct: 383  SKLVAQHARGVRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASK 442

Query: 262  CLRVVRSIDQKIGEGINIKYM 200
            CLRVV SIDQK+G+ I+ K +
Sbjct: 443  CLRVVGSIDQKVGDCISAKVL 463


>ref|XP_015167787.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Solanum
            tuberosum]
          Length = 560

 Score =  428 bits (1101), Expect = e-142
 Identities = 226/381 (59%), Positives = 283/381 (74%), Gaps = 1/381 (0%)
 Frame = -1

Query: 1339 GKGSSDGLYSLL-DNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 1163
            G+GS   +Y  +  + I  S + +K  YL +   T++  F LLMKNLD+LE+MF+DS   
Sbjct: 91   GRGSPSNVYGDIGSHKIGISPDGEKPTYLNT---TKSLHFSLLMKNLDLLENMFADSEMS 147

Query: 1162 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 983
            RLERDIL QLE+LGAL  FH+CLSRT  SS    + + P E+++E   +D V N + KV 
Sbjct: 148  RLERDILVQLEKLGALEFFHTCLSRTHHSSTFPKVLDVPRELIKEVEKDDLVGNAIDKVV 207

Query: 982  IQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIAR 803
            ++S                 + I   +  +  I  D QQPKF S  RT  SRNKRQKIA+
Sbjct: 208  VRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFYSGKRTQASRNKRQKIAK 267

Query: 802  NEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDEL 623
            NEAEMS GVK+VA+LE++R+ILEEETG++A+ SSWAEAAGI++KELQQ L++GW+CRDEL
Sbjct: 268  NEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEAAGIEQKELQQRLHFGWYCRDEL 327

Query: 622  LRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSM 443
            L+STRSLV+++A+NY GLGVAFEDL+QAGNMGVLQGA RFD TRGYKFSTYVQYWIRKS+
Sbjct: 328  LKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDHTRGYKFSTYVQYWIRKSL 387

Query: 442  STLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSASK 263
            S LVA+HARGVR+P T+ KVINQ+ KARKTLS S GK+P D EIAKFTGLS A+I  ASK
Sbjct: 388  SKLVAQHARGVRIPFTICKVINQIHKARKTLSRSHGKFPADDEIAKFTGLSTARIAMASK 447

Query: 262  CLRVVRSIDQKIGEGINIKYM 200
            CLRVV SIDQK+G+ I+ K +
Sbjct: 448  CLRVVGSIDQKVGDCISAKVL 468


>ref|XP_015085648.1| PREDICTED: RNA polymerase sigma factor sigC [Solanum pennellii]
          Length = 551

 Score =  426 bits (1096), Expect = e-142
 Identities = 219/352 (62%), Positives = 270/352 (76%)
 Frame = -1

Query: 1255 TSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKS 1076
            T +  T++  F LLMKNLD+LE+MF+DS   RLERDIL QLE+LGAL  FH+CLSRT  S
Sbjct: 108  TYINTTKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHS 167

Query: 1075 SDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELS 896
            S    + + P E+++E   +D V N + KV ++S                 + I   +  
Sbjct: 168  STFPKVLDVPRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPH 227

Query: 895  SDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQI 716
            +  I  D QQPKF S  RT  SRNKRQKIA+NEAEMS GVK+VA+LE++R+ILEEETG++
Sbjct: 228  TKNIQEDLQQPKFYSGKRTHASRNKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGRV 287

Query: 715  ASLSSWAEAAGIKKKELQQHLYYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAG 536
            A+ SSWAEAAGI++KELQQHL++GW+CRDELL+STRSLV+++A+NY GLGVAFEDL+QAG
Sbjct: 288  ATFSSWAEAAGIEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAG 347

Query: 535  NMGVLQGAERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARK 356
            NMGVLQGA RFD TRGYKFSTYVQYWIRKS+S LVA+HARGVR+P T+ KVINQ+ KARK
Sbjct: 348  NMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARK 407

Query: 355  TLSTSTGKYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYM 200
            TLS S GK+P D EIAKFTGLS A+I  ASKCLRVV SIDQK+G+ I+ K +
Sbjct: 408  TLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVL 459


>ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
            sylvestris]
 ref|XP_016482950.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
            [Nicotiana tabacum]
          Length = 554

 Score =  426 bits (1094), Expect = e-141
 Identities = 225/382 (58%), Positives = 284/382 (74%), Gaps = 1/382 (0%)
 Frame = -1

Query: 1342 LGKGSSDGLYSLLDND-IQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNA 1166
            +G+GS   +Y  + +D    S + +K +YL++   T+A  F LLMKN+D+LE+MF+DS  
Sbjct: 85   IGRGSPSNIYGDIGSDKTGISPDGEKPSYLST---TRAPHFSLLMKNIDLLENMFADSEM 141

Query: 1165 VRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKV 986
             RLE DIL QLE+LGAL  FHS LSRTL S+ S ++ + P E+VEE   +D V N + KV
Sbjct: 142  SRLENDILVQLEKLGALEFFHSRLSRTLHST-SPEVLDVPRELVEEIEKDDLVGNGIDKV 200

Query: 985  FIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIA 806
             ++S                 + I      +  I  D QQPKF S  RT  SRNKRQKIA
Sbjct: 201  VVRSRKKQERNSRRNRASGIANDIITVHPHTKNIQEDMQQPKFYSGKRTHASRNKRQKIA 260

Query: 805  RNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDE 626
            +NEAEMS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQ HL++GW+CRDE
Sbjct: 261  KNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLHFGWYCRDE 320

Query: 625  LLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKS 446
            LL+STRSLV+++A+NY GLGVAFEDL+QAGNMGVLQGA RFD TRGYKFSTYVQYWIRKS
Sbjct: 321  LLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKS 380

Query: 445  MSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSAS 266
            +S LVA+HARG+R+P T+ K INQ+ KARK LS S GK+P D+EIAK+TGLS A+I  AS
Sbjct: 381  LSKLVAQHARGIRIPFTICKAINQIHKARKALSRSHGKFPGDNEIAKYTGLSTARIAMAS 440

Query: 265  KCLRVVRSIDQKIGEGINIKYM 200
            KCLRVV SIDQK+G  I+ K +
Sbjct: 441  KCLRVVGSIDQKVGHCISAKVL 462


>ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
            sylvestris]
 ref|XP_016482949.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1
            [Nicotiana tabacum]
          Length = 584

 Score =  426 bits (1094), Expect = e-141
 Identities = 225/382 (58%), Positives = 284/382 (74%), Gaps = 1/382 (0%)
 Frame = -1

Query: 1342 LGKGSSDGLYSLLDND-IQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNA 1166
            +G+GS   +Y  + +D    S + +K +YL++   T+A  F LLMKN+D+LE+MF+DS  
Sbjct: 115  IGRGSPSNIYGDIGSDKTGISPDGEKPSYLST---TRAPHFSLLMKNIDLLENMFADSEM 171

Query: 1165 VRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKV 986
             RLE DIL QLE+LGAL  FHS LSRTL S+ S ++ + P E+VEE   +D V N + KV
Sbjct: 172  SRLENDILVQLEKLGALEFFHSRLSRTLHST-SPEVLDVPRELVEEIEKDDLVGNGIDKV 230

Query: 985  FIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIA 806
             ++S                 + I      +  I  D QQPKF S  RT  SRNKRQKIA
Sbjct: 231  VVRSRKKQERNSRRNRASGIANDIITVHPHTKNIQEDMQQPKFYSGKRTHASRNKRQKIA 290

Query: 805  RNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDE 626
            +NEAEMS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQ HL++GW+CRDE
Sbjct: 291  KNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLHFGWYCRDE 350

Query: 625  LLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKS 446
            LL+STRSLV+++A+NY GLGVAFEDL+QAGNMGVLQGA RFD TRGYKFSTYVQYWIRKS
Sbjct: 351  LLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKS 410

Query: 445  MSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSAS 266
            +S LVA+HARG+R+P T+ K INQ+ KARK LS S GK+P D+EIAK+TGLS A+I  AS
Sbjct: 411  LSKLVAQHARGIRIPFTICKAINQIHKARKALSRSHGKFPGDNEIAKYTGLSTARIAMAS 470

Query: 265  KCLRVVRSIDQKIGEGINIKYM 200
            KCLRVV SIDQK+G  I+ K +
Sbjct: 471  KCLRVVGSIDQKVGHCISAKVL 492


>ref|XP_019070929.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Solanum
            lycopersicum]
          Length = 529

 Score =  423 bits (1088), Expect = e-141
 Identities = 219/352 (62%), Positives = 268/352 (76%)
 Frame = -1

Query: 1255 TSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKS 1076
            T L  T++  F LLMKNLD+LE+MF+DS   RLERDIL QLE+LGAL  FH+CLSRT  S
Sbjct: 86   TYLNTTKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHS 145

Query: 1075 SDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELS 896
            S    + + P E+++E   +D V N + KV ++S                 + I   +  
Sbjct: 146  SSFPKVLDVPRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPH 205

Query: 895  SDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQI 716
            +  I  D QQ KF S  RT  SR KRQKIA+NEAEMS GVK+VA+LE++R+ILEEETGQ+
Sbjct: 206  TKNIQEDLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQV 265

Query: 715  ASLSSWAEAAGIKKKELQQHLYYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAG 536
            A+ SSWA+AAGI++KELQQHL++GW+CRDELL+STRSLV+++A+NY GLGVAFEDL+QAG
Sbjct: 266  ATFSSWAKAAGIEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAG 325

Query: 535  NMGVLQGAERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARK 356
            NMGVLQGA RFD TRGYKFSTYVQYWIRKS+S LVA+HARGVR+P T+ KVINQ+ KARK
Sbjct: 326  NMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARK 385

Query: 355  TLSTSTGKYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYM 200
            TLS S GK+P D EIAKFTGLS A+I  ASKCLRVV SIDQK+G+ IN K +
Sbjct: 386  TLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCINAKVL 437


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Solanum
            lycopersicum]
          Length = 551

 Score =  423 bits (1088), Expect = e-141
 Identities = 219/352 (62%), Positives = 268/352 (76%)
 Frame = -1

Query: 1255 TSLQATQASQFKLLMKNLDILEDMFSDSNAVRLERDILEQLERLGALRLFHSCLSRTLKS 1076
            T L  T++  F LLMKNLD+LE+MF+DS   RLERDIL QLE+LGAL  FH+CLSRT  S
Sbjct: 108  TYLNTTKSLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHS 167

Query: 1075 SDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELS 896
            S    + + P E+++E   +D V N + KV ++S                 + I   +  
Sbjct: 168  SSFPKVLDVPRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPH 227

Query: 895  SDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQI 716
            +  I  D QQ KF S  RT  SR KRQKIA+NEAEMS GVK+VA+LE++R+ILEEETGQ+
Sbjct: 228  TKNIQEDLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQV 287

Query: 715  ASLSSWAEAAGIKKKELQQHLYYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAG 536
            A+ SSWA+AAGI++KELQQHL++GW+CRDELL+STRSLV+++A+NY GLGVAFEDL+QAG
Sbjct: 288  ATFSSWAKAAGIEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAG 347

Query: 535  NMGVLQGAERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARK 356
            NMGVLQGA RFD TRGYKFSTYVQYWIRKS+S LVA+HARGVR+P T+ KVINQ+ KARK
Sbjct: 348  NMGVLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARK 407

Query: 355  TLSTSTGKYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYM 200
            TLS S GK+P D EIAKFTGLS A+I  ASKCLRVV SIDQK+G+ IN K +
Sbjct: 408  TLSRSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCINAKVL 459


>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC [Nicotiana
            tomentosiformis]
          Length = 572

 Score =  423 bits (1088), Expect = e-140
 Identities = 223/383 (58%), Positives = 278/383 (72%), Gaps = 2/383 (0%)
 Frame = -1

Query: 1342 LGKGSSDGLYSLLDNDIQTSNNKDKL--AYLTSLQATQASQFKLLMKNLDILEDMFSDSN 1169
            +G+GS   +Y     DI +  N   L     T L  T+A  F LLMKNLD+LE+MF+DS 
Sbjct: 102  IGRGSPTNIYG----DIGSPKNVISLDGEKPTYLNTTRALHFSLLMKNLDLLENMFADSE 157

Query: 1168 AVRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSK 989
              RLERDI+ QL++LGAL  FH+CLSRT   S   ++ + P E++EE   +  V N + K
Sbjct: 158  VSRLERDIMVQLDKLGALEFFHTCLSRTNHCSTFPEVLDVPRELIEEIEKDGLVGNGIDK 217

Query: 988  VFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKI 809
            V ++S                 + I   +  +  I  D QQPKF S  RT  SRNKRQKI
Sbjct: 218  VVVRSKKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFFSGKRTHTSRNKRQKI 277

Query: 808  ARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRD 629
            A+NEAEMS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQQ L++GW+CRD
Sbjct: 278  AKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQQRLHFGWYCRD 337

Query: 628  ELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRK 449
            ELL+STRSLV+++A+NY GLGVAFEDL+QAGNMGVLQGA RFD TRGYKFSTYVQYWIRK
Sbjct: 338  ELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRK 397

Query: 448  SMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSA 269
            S+S LVA+HARG+R+P T+ K INQ+ KARK LS S GK+P D EIAK+TGLS A+I  A
Sbjct: 398  SLSKLVAQHARGIRIPFTICKAINQIHKARKALSRSHGKFPGDDEIAKYTGLSTARIAMA 457

Query: 268  SKCLRVVRSIDQKIGEGINIKYM 200
            SKCLRVV SIDQK+G+ I+ K M
Sbjct: 458  SKCLRVVGSIDQKVGDCISAKVM 480


>ref|XP_016487978.1| PREDICTED: RNA polymerase sigma factor sigC-like [Nicotiana tabacum]
          Length = 572

 Score =  423 bits (1087), Expect = e-140
 Identities = 222/384 (57%), Positives = 277/384 (72%), Gaps = 3/384 (0%)
 Frame = -1

Query: 1342 LGKGSSDGLYSLLD---NDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDS 1172
            +G+GS   +Y  +    N I     K      T L  T+A  F LLMKNLD+LE+MF+DS
Sbjct: 102  IGRGSPTNIYGDIGSPKNGITLDGEKP-----TYLNTTRALHFSLLMKNLDLLENMFADS 156

Query: 1171 NAVRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVS 992
               RLERDI+ QL++LGAL  FH+CLSRT   S   ++ + P E++EE   +  V N + 
Sbjct: 157  EVSRLERDIMVQLDKLGALEFFHTCLSRTNHCSTFPEVLDVPRELIEEIEKDGLVGNGID 216

Query: 991  KVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQK 812
            KV ++S                 + I   +  +  I  D QQPKF S  RT  SRNKRQK
Sbjct: 217  KVVVRSKKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFFSGKRTHTSRNKRQK 276

Query: 811  IARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCR 632
            IA+NEAEMS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQQ L++GW+CR
Sbjct: 277  IAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQQRLHFGWYCR 336

Query: 631  DELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIR 452
            DELL+STRSLV+++A+NY GLGVAFEDL+QAGNMGVLQGA RFD TRGYKFSTYVQYWIR
Sbjct: 337  DELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIR 396

Query: 451  KSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMS 272
            KS+S LVA+HARG+R+P T+ K INQ+ KARK LS S GK+P D EIAK+TGLS A+I  
Sbjct: 397  KSLSKLVAQHARGIRIPFTICKAINQIHKARKALSRSHGKFPGDDEIAKYTGLSTARIAM 456

Query: 271  ASKCLRVVRSIDQKIGEGINIKYM 200
            ASKCLRVV SIDQK+G+ I+ K M
Sbjct: 457  ASKCLRVVGSIDQKVGDCISAKVM 480


>ref|XP_019263762.1| PREDICTED: RNA polymerase sigma factor sigC [Nicotiana attenuata]
 gb|OIT36910.1| rna polymerase sigma factor sigc [Nicotiana attenuata]
          Length = 555

 Score =  422 bits (1085), Expect = e-140
 Identities = 222/382 (58%), Positives = 284/382 (74%), Gaps = 1/382 (0%)
 Frame = -1

Query: 1342 LGKGSSDGLYSLLDND-IQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNA 1166
            +G+GS   +Y  + +D I  S + +K  YL +   T+A  F LLMKN+D+LE+MF+DS  
Sbjct: 86   IGRGSPSNIYGDIGSDKIGISPDGEKPLYLNT---TRAPHFSLLMKNIDLLENMFADSEM 142

Query: 1165 VRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKV 986
             RLE +IL QLE+LGAL  FHS LSRTL S+   ++ + P +++EE   +D V N ++KV
Sbjct: 143  SRLENNILVQLEKLGALEFFHSRLSRTLHSTFP-EVLDVPRDLIEEIEKDDLVGNGINKV 201

Query: 985  FIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIA 806
             ++S                 + I      +  I  D QQPKF S  RT  SRNKRQKIA
Sbjct: 202  VVRSRKKQERKSRRNRASGIANDIITVHPHTKNIQEDMQQPKFYSGKRTHASRNKRQKIA 261

Query: 805  RNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDE 626
            +NEAEMS GVK+VAELE++R+ILEEETG++AS SSWAEAAG+++KELQ HL++GW+CRDE
Sbjct: 262  KNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAAGVEQKELQHHLHFGWYCRDE 321

Query: 625  LLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKS 446
            LL+STRSLV+++A+NY GLGVAFEDL+QAGNMGVLQGA RFD TRGYKFSTYVQYWIRKS
Sbjct: 322  LLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVRFDDTRGYKFSTYVQYWIRKS 381

Query: 445  MSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSAS 266
            +S LVA+HARG+R+P T+ K INQ+ KARK LS S GK+P D+EIAK+TGLS A+I  AS
Sbjct: 382  LSKLVAQHARGIRIPFTICKAINQIHKARKALSRSHGKFPGDNEIAKYTGLSTARIAMAS 441

Query: 265  KCLRVVRSIDQKIGEGINIKYM 200
            KCLRVV SIDQK+G+ I+ K +
Sbjct: 442  KCLRVVGSIDQKVGDCISAKVL 463


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
 emb|CBI20603.3| unnamed protein product, partial [Vitis vinifera]
          Length = 561

 Score =  420 bits (1079), Expect = e-139
 Identities = 221/370 (59%), Positives = 273/370 (73%)
 Frame = -1

Query: 1342 LGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 1163
            +GK S   L+ ++ N  Q    +D  A +  LQA++ASQF LL++NLDILE+MF+DSN V
Sbjct: 89   IGKCSHGDLFKIV-NASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMV 147

Query: 1162 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 983
            RLERDI+ QL RLGAL+LF  CLSRTLK+S S DL +AP E + E + N +VD+H+ KV 
Sbjct: 148  RLERDIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVV 207

Query: 982  IQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIAR 803
            ++SG                  IY   L S TI +   +P   +  RT  SR KR   A+
Sbjct: 208  VRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAK 267

Query: 802  NEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDEL 623
            NEAEMS GVK+VA LE++R  LEEE G +ASLS+WAEAAG+ KK LQQ L +GW+CRDEL
Sbjct: 268  NEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDEL 327

Query: 622  LRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSM 443
            LRST SLV++IA+NY G+GVAFED++QAGN+GVLQGAERFD T+GY+FSTYVQYWIRKSM
Sbjct: 328  LRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSM 387

Query: 442  STLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSASK 263
            STLVARHARGV++P TL++ I Q+QKARK L  S G+YPDD+EIAKFTGLS+AKI SA  
Sbjct: 388  STLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGN 447

Query: 262  CLRVVRSIDQ 233
            CLRVV S DQ
Sbjct: 448  CLRVVGSTDQ 457


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  420 bits (1079), Expect = e-138
 Identities = 221/370 (59%), Positives = 273/370 (73%)
 Frame = -1

Query: 1342 LGKGSSDGLYSLLDNDIQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNAV 1163
            +GK S   L+ ++ N  Q    +D  A +  LQA++ASQF LL++NLDILE+MF+DSN V
Sbjct: 139  IGKCSHGDLFKIV-NASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMV 197

Query: 1162 RLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVF 983
            RLERDI+ QL RLGAL+LF  CLSRTLK+S S DL +AP E + E + N +VD+H+ KV 
Sbjct: 198  RLERDIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTEHIRECQTNGTVDDHLDKVV 257

Query: 982  IQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIAR 803
            ++SG                  IY   L S TI +   +P   +  RT  SR KR   A+
Sbjct: 258  VRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAK 317

Query: 802  NEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDEL 623
            NEAEMS GVK+VA LE++R  LEEE G +ASLS+WAEAAG+ KK LQQ L +GW+CRDEL
Sbjct: 318  NEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDEL 377

Query: 622  LRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSM 443
            LRST SLV++IA+NY G+GVAFED++QAGN+GVLQGAERFD T+GY+FSTYVQYWIRKSM
Sbjct: 378  LRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSM 437

Query: 442  STLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSASK 263
            STLVARHARGV++P TL++ I Q+QKARK L  S G+YPDD+EIAKFTGLS+AKI SA  
Sbjct: 438  STLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGN 497

Query: 262  CLRVVRSIDQ 233
            CLRVV S DQ
Sbjct: 498  CLRVVGSTDQ 507


>ref|XP_017983625.1| PREDICTED: RNA polymerase sigma factor sigC [Theobroma cacao]
 ref|XP_017983626.1| PREDICTED: RNA polymerase sigma factor sigC [Theobroma cacao]
          Length = 536

 Score =  414 bits (1065), Expect = e-137
 Identities = 222/382 (58%), Positives = 281/382 (73%), Gaps = 1/382 (0%)
 Frame = -1

Query: 1342 LGKGSSDGLYSLLDND-IQTSNNKDKLAYLTSLQATQASQFKLLMKNLDILEDMFSDSNA 1166
            +GKGS    +SL   D        DK +  TS QA +AS + LLM+NLD+LE+ F+DS+ 
Sbjct: 63   IGKGSQSHSHSLTMIDKTHELIGGDKSSSRTSPQACKASHYSLLMENLDVLEETFADSDV 122

Query: 1165 VRLERDILEQLERLGALRLFHSCLSRTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKV 986
            + LER+IL QL RLGAL+LF++CLSRTLK+S+ +DLS+ P     +  +N SVD    K 
Sbjct: 123  LTLEREILLQLGRLGALKLFNTCLSRTLKASNILDLSDVPANS-GDCNMNLSVDGQKDKT 181

Query: 985  FIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIA 806
             + S                 + I  Q L S+T+   FQ+PK  S  R S SR++R +IA
Sbjct: 182  VVCSRKKKQRKKIRERALENPTIISTQLLPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIA 241

Query: 805  RNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDE 626
            RNEAEMS GVK+VA LE++RT LEEETG+ ASLS WAEAAG+ +K LQQHL +GW+CRDE
Sbjct: 242  RNEAEMSKGVKVVANLERIRTTLEEETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDE 301

Query: 625  LLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKS 446
            LLRSTRSLV++ A+NY GLG+A EDL+QAG++GVLQGAERFD TRGY+FSTYVQ+WIRKS
Sbjct: 302  LLRSTRSLVLYFARNYRGLGIAHEDLIQAGSLGVLQGAERFDHTRGYRFSTYVQFWIRKS 361

Query: 445  MSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSAS 266
            +S +V RHARG++VPCTLS+ I Q+QKARK LS S GKYPD+  IAKFTGLS+AKI SA+
Sbjct: 362  VSRIVTRHARGIQVPCTLSRAIVQIQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSAN 421

Query: 265  KCLRVVRSIDQKIGEGINIKYM 200
            KC+RVV SIDQKIG+ +N KY+
Sbjct: 422  KCMRVVGSIDQKIGDCMNAKYL 443


>gb|PIN16833.1| hypothetical protein CDL12_10487 [Handroanthus impetiginosus]
          Length = 393

 Score =  408 bits (1049), Expect = e-137
 Identities = 214/297 (72%), Positives = 239/297 (80%), Gaps = 1/297 (0%)
 Frame = -1

Query: 1090 RTLKSSDSIDLSNAPVEIVEERRVNDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXS-AI 914
            RTLKSS + D  NA  E+VE   V+DSVD HV KV ++SG                S A 
Sbjct: 2    RTLKSSSAFDFYNASTELVEVPSVDDSVDTHVGKVVVRSGKKELRKRRRKRTLEKESDAT 61

Query: 913  YLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILE 734
             +QE  S T S+D  QPK  S    S+S  KRQKI RNEAEMSTGVK+VAELEK+R ILE
Sbjct: 62   SIQESPSKTNSKDPLQPKVSSAKNASKSSKKRQKIVRNEAEMSTGVKVVAELEKVRMILE 121

Query: 733  EETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFE 554
            EET QI SL SWAEAAG+KKKELQQHL+YGW CRDELL+STRSLV+FIA+NYWGLGVAFE
Sbjct: 122  EETRQIVSLRSWAEAAGVKKKELQQHLHYGWRCRDELLQSTRSLVLFIARNYWGLGVAFE 181

Query: 553  DLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQ 374
            DL+QAGN+GVLQGAERF+Q+RGYKFSTYVQYWI KSMSTLVA+HARGVR+PCTLSKVIN+
Sbjct: 182  DLIQAGNIGVLQGAERFEQSRGYKFSTYVQYWIWKSMSTLVAKHARGVRIPCTLSKVINK 241

Query: 373  VQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKY 203
            VQKARK LSTS GKYPDD EIAKFTGLS+AKIMSASKCLRVV SIDQKIG+ I+ KY
Sbjct: 242  VQKARKALSTSNGKYPDDCEIAKFTGLSIAKIMSASKCLRVVGSIDQKIGDSISTKY 298