BLASTX nr result

ID: Rehmannia31_contig00019628 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00019628
         (352 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN22317.1| Transcription initiation factor TFIID, subunit TA...    60   6e-08

>gb|PIN22317.1| Transcription initiation factor TFIID, subunit TAF12 [Handroanthus
           impetiginosus]
          Length = 694

 Score = 59.7 bits (143), Expect = 6e-08
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = -1

Query: 331 NSGIYGQMNFGGMNTMQQSPQQQNSNVGINNT 236
           NSGIYGQMNFGGMN +QQ P QQNSNV +NNT
Sbjct: 155 NSGIYGQMNFGGMNAIQQQPPQQNSNVNMNNT 186


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