BLASTX nr result
ID: Rehmannia31_contig00019530
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00019530
(485 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP30912.1| Retrovirus-related Pol polyprotein from transposo... 108 2e-24
emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera] 106 1e-23
gb|PKU71791.1| Retrovirus-related Pol polyprotein from transposo... 100 1e-21
gb|PKU70142.1| Retrovirus-related Pol polyprotein from transposo... 99 2e-21
gb|PKU81200.1| Retrovirus-related Pol polyprotein from transposo... 98 4e-21
gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposo... 95 2e-19
gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposo... 95 2e-19
gb|PNX57680.1| gag-pol polyprotein, partial [Trifolium pratense] 91 2e-19
gb|KYP53827.1| Retrovirus-related Pol polyprotein from transposo... 93 5e-19
gb|KYP38726.1| Retrovirus-related Pol polyprotein from transposo... 93 8e-19
dbj|GAV70991.1| hypothetical protein CFOL_v3_14486 [Cephalotus f... 89 9e-19
gb|KYP35263.1| Retrovirus-related Pol polyprotein from transposo... 92 1e-18
dbj|GAV68365.1| hypothetical protein CFOL_v3_11868, partial [Cep... 89 1e-18
gb|KYP33441.1| Retrovirus-related Pol polyprotein from transposo... 92 1e-18
gb|KYP47407.1| Retrovirus-related Pol polyprotein from transposo... 92 1e-18
gb|KYP36435.1| Retrovirus-related Pol polyprotein from transposo... 92 1e-18
gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposo... 92 2e-18
gb|KYP33249.1| Retrovirus-related Pol polyprotein from transposo... 92 2e-18
gb|PKA66252.1| Retrovirus-related Pol polyprotein from transposo... 87 3e-18
dbj|GAU16893.1| hypothetical protein TSUD_368430 [Trifolium subt... 89 2e-17
>gb|KYP30912.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 766
Score = 108 bits (270), Expect = 2e-24
Identities = 68/166 (40%), Positives = 85/166 (51%), Gaps = 5/166 (3%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVER-IPNXX 309
NTKD L+K D K D+G F+GYS SKAYRVYN + VVEESIHVKFN+ +R + +
Sbjct: 159 NTKDDLEKFDAKSDKGFFIGYSETSKAYRVYNSRTLVVEESIHVKFNDKKETDRELSDLE 218
Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGD-ISDLPVALKFKGDHPKDLIIGDP 132
E + D I ++K HPK+ IIG
Sbjct: 219 DDFAGMELNTHDSRKDEQVSEASSEPLQTNVESQTDMIPPHKSEWRYKSHHPKEQIIGST 278
Query: 131 LDKVMTRRKFA---EKALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
+ V TR KF AL+S+ EPK+ EA+ DE W L MQEELNQ
Sbjct: 279 SEGVKTRSKFRHLNSLALLSEIEPKSIDEALHDEGWILAMQEELNQ 324
>emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera]
Length = 1409
Score = 106 bits (265), Expect = 1e-23
Identities = 73/176 (41%), Positives = 91/176 (51%), Gaps = 15/176 (8%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASG--VER---- 324
NTKD L K D K D GIF+GYST SKA+RV+NK + VVEESIHV F+E++ ER
Sbjct: 832 NTKDNLGKFDAKSDVGIFLGYSTSSKAFRVFNKRTMVVEESIHVIFDESNNSLQERESFD 891
Query: 323 ----IPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDIS-DLPVALKFKGDH 159
+ Q+ +G+ S DLP KF +H
Sbjct: 892 DDLGLETSMGKLQIEDRRQQEEVVEDPKKEESPLALPPPQQVQGESSQDLPKDWKFVINH 951
Query: 158 PKDLIIGDPLDKVMTRRKFA----EKALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
P+D IIG+P V TR A ISQ EPKN K+A+ DE+W + MQEELNQ
Sbjct: 952 PQDQIIGNPSSGVRTRSSLRNICNNLAFISQIEPKNIKDALVDENWIIVMQEELNQ 1007
>gb|PKU71791.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 667
Score = 100 bits (250), Expect = 1e-21
Identities = 62/165 (37%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N K L K DPK DEGIF+GYS+ K+YRV+NK + V+EE+ HV F+E +E
Sbjct: 62 NGKSALGKFDPKSDEGIFVGYSSVGKSYRVFNKRTLVIEETTHVVFDENENMEE------ 115
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISDLPVALKFKGDHPKDLIIGDPLD 126
P L+F +HPK+LIIG+P +
Sbjct: 116 ---------------------------------------PKVLRFSKNHPKELIIGEPSE 136
Query: 125 KVMTRRKFAEK----ALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
V TRR ++ A IS EP N +A+ DE W L MQEELNQ
Sbjct: 137 GVRTRRGLNKEVNHSAFISTVEPTNIDQALSDEFWILAMQEELNQ 181
>gb|PKU70142.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 455
Score = 99.4 bits (246), Expect = 2e-21
Identities = 62/165 (37%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N K L K DPK DEGIF+GYS+ K+YRV+NK + V+EE+ HV F+E +E
Sbjct: 62 NGKSALGKFDPKSDEGIFVGYSSVGKSYRVFNKRTLVIEETTHVVFDENENMEE------ 115
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISDLPVALKFKGDHPKDLIIGDPLD 126
P L+F +HPK+LIIG+P +
Sbjct: 116 ---------------------------------------PKVLRFSKNHPKELIIGEPSE 136
Query: 125 KVMTRR----KFAEKALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
V TRR + A IS EP N +A+ DE W L MQEELNQ
Sbjct: 137 GVRTRRGLNKEVNHSAFISTIEPTNIDQALLDEFWILAMQEELNQ 181
>gb|PKU81200.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 402
Score = 98.2 bits (243), Expect = 4e-21
Identities = 61/165 (36%), Positives = 86/165 (52%), Gaps = 4/165 (2%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N KD L K D K D+GIF+GYS K++RV+NK +VEES+HV F+E S ++ I N
Sbjct: 62 NDKDPLGKFDSKSDDGIFLGYSIFGKSFRVFNKRKLIVEESVHVIFDENS-IDLIRN--- 117
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISDLPVALKFKGDHPKDLIIGDPLD 126
+E GD LP ++ +HPK+ IIGDP
Sbjct: 118 --------------DLNDDHIENIKKINLEEKEGD--SLPKEWRYNRNHPKESIIGDPSQ 161
Query: 125 KVMTRRKFAEK----ALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
V TRR +++ A +S+ EPKN EA+++ W + +EELNQ
Sbjct: 162 GVKTRRNLSDEVEHSAFLSEIEPKNIDEALQNNFWIIAKEEELNQ 206
>gb|KYP32982.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1533
Score = 94.7 bits (234), Expect = 2e-19
Identities = 63/165 (38%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N K+QL K D K DE IF+GYST SKAYR+YNK + VVEES+HV F+E++ E
Sbjct: 886 NGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQE----TRQ 941
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISDLPVALKFKGDHPKDLIIGDPLD 126
+ + LP K D D IIG
Sbjct: 942 TEVEDLTELLDQSLLENEPNDVSKESESHVKQKETCEQLPKEWKTTRDLSMDNIIGSIGK 1001
Query: 125 KVMTRRKFAE----KALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
V TR A +SQ EPKN EA++DE W + MQEELNQ
Sbjct: 1002 GVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAMQEELNQ 1046
>gb|KYP78729.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1564
Score = 94.7 bits (234), Expect = 2e-19
Identities = 63/165 (38%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N K+QL K D K DE IF+GYST SKAYR+YNK + VVEES+HV F+E++ E
Sbjct: 917 NGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQE----TRQ 972
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISDLPVALKFKGDHPKDLIIGDPLD 126
++ + LP K D D IIG+
Sbjct: 973 TEIEDLNELLDQSLLENEPNEVPKESESLEKAKETCEQLPKEWKTSRDLSMDNIIGNIGK 1032
Query: 125 KVMTRRKFAE----KALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
V TR A +SQ EPKN EA++DE W + MQEELNQ
Sbjct: 1033 GVSTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAMQEELNQ 1077
>gb|PNX57680.1| gag-pol polyprotein, partial [Trifolium pratense]
Length = 258
Score = 91.3 bits (225), Expect = 2e-19
Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Frame = -1
Query: 461 LDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXXXXXXXXXX 282
+DPK +EGIF+GYST S+AYRVYN + V+ ESI+V ++ + N
Sbjct: 1 MDPKSEEGIFLGYSTNSRAYRVYNLRTKVIIESINVVIDDLTSARTSDNEEDVATSLPTS 60
Query: 281 XXXXXXXXXXXXXXXXXXXXXQEDRGDISDLPVALKFKGDHPKDLIIGDPLDKVMTRRK- 105
G +S +P +++ + +HPKDLIIG+P + TRR
Sbjct: 61 DAAVAEEESDSDDETTDLMP-----GPVSKVP-SIRIQKNHPKDLIIGNPNQGIATRRSN 114
Query: 104 --FAEKALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
+S+ EPKN KEA+ DE W MQ+EL Q
Sbjct: 115 EVVTNSCFVSKIEPKNVKEALTDEFWIEAMQDELTQ 150
>gb|KYP53827.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 676
Score = 93.2 bits (230), Expect = 5e-19
Identities = 63/165 (38%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N K+QL K D K DE IF+GYST SKAYR+YNK + VVEES+HV F+E++ E
Sbjct: 373 NGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQE----TRK 428
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISDLPVALKFKGDHPKDLIIGDPLD 126
++ R LP K D D IIG+
Sbjct: 429 IEIEYLTELLDQPLLENEPNEEPKESQSHEKVRETSEQLPKEWKTSRDLSMDNIIGNIGK 488
Query: 125 KVMTRRKFAE----KALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
V TR A +SQ EPK+ EA++DE W + MQEELNQ
Sbjct: 489 GVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMAMQEELNQ 533
>gb|KYP38726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 749
Score = 92.8 bits (229), Expect = 8e-19
Identities = 62/165 (37%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N K+QL K D K DE IF+GYST SKAYR+YNK + VVEES+HV F+E++ E
Sbjct: 102 NGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQE----TRQ 157
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISDLPVALKFKGDHPKDLIIGDPLD 126
++ + LP K D D IIG+
Sbjct: 158 TEIEDLNELLDQSLLENEPNEVPKESESHEKAKETCEQLPKEWKTSRDLSMDNIIGNIGK 217
Query: 125 KVMTRRKFAE----KALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
V TR A +SQ EPK+ EA++DE W + MQEELNQ
Sbjct: 218 GVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMAMQEELNQ 262
>dbj|GAV70991.1| hypothetical protein CFOL_v3_14486 [Cephalotus follicularis]
Length = 238
Score = 89.4 bits (220), Expect = 9e-19
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N KD L+K D K DEGIF+GYS SKAYRV+NK + ++EESIHV F E++ R +
Sbjct: 66 NEKDNLEKFDAKSDEGIFLGYSLNSKAYRVFNKRTLIIEESIHVLFEESNSAPRKGDVVD 125
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQED--RGDISDLPVALKFKGDHPKDLIIGDP 132
+++ + ++ P+ + K + +IG+P
Sbjct: 126 DVGMLEQMESLDINKEDGEVDKVEEEGGHEKEIQQIQVTKEPIVRREKEYVKDNEVIGNP 185
Query: 131 LDKVMTRRKFAE----KALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
+ V TR E A IS EPKN +A+ D+ W + MQ+ELN+
Sbjct: 186 TEGVRTRSALREYCDNVAFISNIEPKNIFDALNDDCWIVAMQDELNR 232
>gb|KYP35263.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 570
Score = 92.4 bits (228), Expect = 1e-18
Identities = 64/166 (38%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N K+QL K D K DE IF+GYST SKAYR+YNK + VVEES+HV F+E++ E
Sbjct: 117 NGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQE-----TR 171
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISD-LPVALKFKGDHPKDLIIGDPL 129
E+ + S+ LP K D D IIG+
Sbjct: 172 QTEIEDLTDLLDQPLLESETNNKPKESESHENTKETSEQLPKEWKTSRDLSIDNIIGNIG 231
Query: 128 DKVMTRRKFAE----KALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
V TR A +SQ EPK+ EA++DE W + MQEELNQ
Sbjct: 232 KGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMAMQEELNQ 277
>dbj|GAV68365.1| hypothetical protein CFOL_v3_11868, partial [Cephalotus
follicularis]
Length = 244
Score = 89.4 bits (220), Expect = 1e-18
Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N KD L K D K D+GIF+GYS SKAY+V+NK + ++EESIHV F E++ R N
Sbjct: 72 NGKDNLGKFDAKSDDGIFLGYSLNSKAYKVFNKRTLIIEESIHVSFEESNSAPRKGNVVD 131
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQED--RGDISDLPVALKFKGDHPKDLIIGDP 132
+E+ + ++ P+A + + + +IG+P
Sbjct: 132 DVGILDQMQGLNISKDDVEVDKIEKEDVHEEELQQIQVTKEPIARREREYVKDNEVIGNP 191
Query: 131 LDKVMTRRKFAEKA----LISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
+ V TR E IS E KN +A++D+ W + MQEELNQ
Sbjct: 192 TEGVRTRSSLREYCDNVPFISNIEHKNVFDALKDDFWIMAMQEELNQ 238
>gb|KYP33441.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1470
Score = 92.4 bits (228), Expect = 1e-18
Identities = 64/166 (38%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N K+QL K D K DE IF+GYST SKAYR+YNK + VVEES+HV F+E++ E
Sbjct: 917 NGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQE-----TR 971
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISD-LPVALKFKGDHPKDLIIGDPL 129
E+ + S+ LP K D D IIG+
Sbjct: 972 QTEIEDLTDLLDQPLLESETNNKPKESESHENTKETSEQLPKEWKTSRDLSIDNIIGNIG 1031
Query: 128 DKVMTRRKFAE----KALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
V TR A +SQ EPK+ EA++DE W + MQEELNQ
Sbjct: 1032 KGVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMAMQEELNQ 1077
>gb|KYP47407.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1569
Score = 92.4 bits (228), Expect = 1e-18
Identities = 61/165 (36%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N K+QL K D K DE IF+GYST SK+YR+YNK + VVEES+HV F+E++ E
Sbjct: 922 NGKEQLGKFDAKADEAIFLGYSTNSKSYRIYNKRTLVVEESVHVVFDESNKQE----TRQ 977
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISDLPVALKFKGDHPKDLIIGDPLD 126
++++ LP K + D IIG+
Sbjct: 978 TEIEDLNELLDQPLLESEPNEKSKESVSHEKEKVTCEQLPKEWKTSRELSIDNIIGNIGK 1037
Query: 125 KVMTRRKFAE----KALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
V TR A +SQ EPKN EA++DE W + MQEELNQ
Sbjct: 1038 GVTTRSAIKNICNTMAFVSQVEPKNIDEALKDEHWLMAMQEELNQ 1082
>gb|KYP36435.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 963
Score = 92.0 bits (227), Expect = 1e-18
Identities = 61/165 (36%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N K+QL K D K DE IF+GYST SKAYRVYNK + +VEES+H+ F+E + E
Sbjct: 332 NGKEQLGKFDAKADEAIFLGYSTNSKAYRVYNKRTLIVEESVHIVFDETNKQE----TKQ 387
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISDLPVALKFKGDHPKDLIIGDPLD 126
+ LP K D + IIG+
Sbjct: 388 TEIEDLTDLLDQPLLESEPNEKPKESESNETTENTSEQLPKEWKTSRDLSMENIIGNIGK 447
Query: 125 KVMTRRKFAE----KALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
V TRR A +SQ EPK EA++DE W + MQEELNQ
Sbjct: 448 GVSTRRAIKNICNVMAFVSQVEPKTIDEALQDEHWLMAMQEELNQ 492
>gb|KYP46031.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 772
Score = 91.7 bits (226), Expect = 2e-18
Identities = 61/165 (36%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N K+QL K D K DE IF+GYST SKAYR+YNK + VVEES+HV F+E++ E
Sbjct: 363 NGKEQLGKFDAKADEAIFLGYSTNSKAYRIYNKRTLVVEESVHVVFDESNKQE----TRQ 418
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISDLPVALKFKGDHPKDLIIGDPLD 126
++ + LP + D D IIG+
Sbjct: 419 TEIEDLTELLDQSLLENEPNEVPKESESHEKAKETCEQLPKEWRTSRDLSMDNIIGNIGK 478
Query: 125 KVMTRRKFAE----KALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
V TR A +SQ EPK+ EA++DE W + MQEELNQ
Sbjct: 479 GVSTRSAIKNICNTMAFVSQVEPKSIDEALKDEHWLMAMQEELNQ 523
>gb|KYP33249.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1010
Score = 91.7 bits (226), Expect = 2e-18
Identities = 63/165 (38%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N K+QL K D K DE IF+GYST SKAYRVYNK + VVEES+HV F+E + E
Sbjct: 363 NGKEQLGKFDAKADEAIFLGYSTNSKAYRVYNKRTLVVEESVHVVFDETNKQE----TKK 418
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISDLPVALKFKGDHPKDLIIGDPLD 126
+ + LP K D + IIG+
Sbjct: 419 TEIEDLTDFLDQPPLESEPSEKPKESESIETTKKTSEQLPKEWKTSKDLSIENIIGNIGK 478
Query: 125 KVMTRRKFAE----KALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
V TRR A +SQ EPK EA+ DE W + MQEELNQ
Sbjct: 479 GVSTRRSIKNICNTMAFVSQVEPKTIDEALHDEHWLMAMQEELNQ 523
>gb|PKA66252.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 195
Score = 87.0 bits (214), Expect = 3e-18
Identities = 56/153 (36%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Frame = -1
Query: 485 NTKDQLDKLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNEASGVERIPNXXX 306
N KD L K DPK DE +F+GYS SKAYRVYN + +VEESIHV+F+E++
Sbjct: 62 NGKDDLGKFDPKADEAVFLGYSLTSKAYRVYNTRTMLVEESIHVEFDESNS--------- 112
Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISDLPVALKFKGDHPKDLIIGDPLD 126
+ G+ DLP K+K HP + I+G+P
Sbjct: 113 -----------NYSSKDNDHDEGIGFEKLSLEGGEQLDLPKEWKYKESHPPEQIMGNPSQ 161
Query: 125 KVMTRRKF----AEKALISQKEPKNAKEAIEDE 39
V TR F A ISQ EP + +EA +DE
Sbjct: 162 GVRTRASFRNEVTHSAFISQIEPTSFEEAEKDE 194
>dbj|GAU16893.1| hypothetical protein TSUD_368430 [Trifolium subterraneum]
Length = 1353
Score = 88.6 bits (218), Expect = 2e-17
Identities = 54/160 (33%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Frame = -1
Query: 464 KLDPKGDEGIFMGYSTKSKAYRVYNKTSGVVEESIHVKFNE---ASGVERIPNXXXXXXX 294
KLDPK +EGIF+GYS S+A+RV+N + + ESI+V + A + +PN
Sbjct: 1047 KLDPKSEEGIFLGYSINSRAFRVFNSRTSTIMESINVVVEDTYSAKETDAVPNADSTPAP 1106
Query: 293 XXXXXXXXXXXXXXXXXXXXXXXXXQEDRGDISDLPVALKFKGDHPKDLIIGDPLDKVMT 114
++G + ++ + +HP DLIIG+P + T
Sbjct: 1107 SDVLEEEIHIDKIEKSSRETDLHNAPVNKGPL------VRIQKNHPTDLIIGNPDQGITT 1160
Query: 113 RRK---FAEKALISQKEPKNAKEAIEDEDWFLEMQEELNQ 3
RR + +S+ EPKN KEA+ DE W MQEELNQ
Sbjct: 1161 RRSQDVVSNACFVSKIEPKNVKEALTDEFWIEAMQEELNQ 1200