BLASTX nr result

ID: Rehmannia31_contig00019361 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00019361
         (389 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012828293.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    64   2e-09
ref|XP_011087927.2| RING-H2 finger protein ATL54-like [Sesamum i...    56   1e-06

>ref|XP_012828293.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Erythranthe
           guttata]
 gb|EYU18446.1| hypothetical protein MIMGU_mgv1a024628mg [Erythranthe guttata]
          Length = 359

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
 Frame = +3

Query: 153 MAFRFRKLLNESAAVDP--GLSDFCEPFCNEAKNPDAICPFTCIDLC 287
           MAF  RKLLNESAAVDP   L   C+ FC  +KNPDA+CP  C+D C
Sbjct: 1   MAFHHRKLLNESAAVDPEESLDKLCDLFCKSSKNPDAVCPSKCLDYC 47


>ref|XP_011087927.2| RING-H2 finger protein ATL54-like [Sesamum indicum]
          Length = 414

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = +3

Query: 153 MAFRFRKLLNESAAVDPGLSDFCEPFCNEAKNPDAICPFTCIDLC 287
           MAF  RKLLNES   D  +  FC+P+C+    P+ +CP TCIDLC
Sbjct: 1   MAFHHRKLLNESV-FDTVIDKFCQPYCDGITKPEGVCPVTCIDLC 44


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