BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00018991
         (477 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020548722.1| RNA polymerase sigma factor sigD, chloroplas...   135   6e-35
ref|XP_020548719.1| RNA polymerase sigma factor sigD, chloroplas...   135   9e-35
gb|PIN23635.1| hypothetical protein CDL12_03626 [Handroanthus im...    99   2e-21
ref|XP_012849780.1| PREDICTED: RNA polymerase sigma factor sigD,...    93   3e-19
ref|XP_012849779.1| PREDICTED: RNA polymerase sigma factor sigD,...    93   4e-19
gb|EYU27026.1| hypothetical protein MIMGU_mgv1a021187mg [Erythra...    64   5e-09
ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD,...    55   8e-06

>ref|XP_020548722.1| RNA polymerase sigma factor sigD, chloroplastic isoform X2 [Sesamum
           indicum]
          Length = 439

 Score =  135 bits (341), Expect = 6e-35
 Identities = 88/164 (53%), Positives = 102/164 (62%), Gaps = 17/164 (10%)
 Frame = -1

Query: 441 TDSYLKVSSY-------ASPLAHT-HYSIQEDELMISSG-----ELSGAATAPARKSENI 301
           T S+LKVSSY        SP  HT  Y++QED ++I S       ++ AA APA   E +
Sbjct: 27  TKSFLKVSSYNTLPTYTQSPCNHTCSYTVQEDAIIIHSACTQHLAVAAAAAAPAHDMEKL 86

Query: 300 LDRNGSENDVKNREHYWCNEDTFXXXXXXXXRSILECVKTDLEDDKFVFVDKKAGKSRFM 121
           LD  GSEND K R  +WCNE           R+  E VK D ED K VFVDKK GKSRFM
Sbjct: 87  LDLKGSENDAK-RGRFWCNEVAVRRKRRRKLRTS-ERVKND-EDGKLVFVDKKEGKSRFM 143

Query: 120 TPKEEATFSWYLKERARIEGVRTEM----GGQELSSSQWAKAAG 1
           T KEEA FSWYLKERARI  V+TE+    G +E+SSSQWAKAAG
Sbjct: 144 TSKEEARFSWYLKERARIVAVKTELLAETGRREVSSSQWAKAAG 187


>ref|XP_020548719.1| RNA polymerase sigma factor sigD, chloroplastic isoform X1 [Sesamum
           indicum]
          Length = 470

 Score =  135 bits (341), Expect = 9e-35
 Identities = 88/164 (53%), Positives = 102/164 (62%), Gaps = 17/164 (10%)
 Frame = -1

Query: 441 TDSYLKVSSY-------ASPLAHT-HYSIQEDELMISSG-----ELSGAATAPARKSENI 301
           T S+LKVSSY        SP  HT  Y++QED ++I S       ++ AA APA   E +
Sbjct: 27  TKSFLKVSSYNTLPTYTQSPCNHTCSYTVQEDAIIIHSACTQHLAVAAAAAAPAHDMEKL 86

Query: 300 LDRNGSENDVKNREHYWCNEDTFXXXXXXXXRSILECVKTDLEDDKFVFVDKKAGKSRFM 121
           LD  GSEND K R  +WCNE           R+  E VK D ED K VFVDKK GKSRFM
Sbjct: 87  LDLKGSENDAK-RGRFWCNEVAVRRKRRRKLRTS-ERVKND-EDGKLVFVDKKEGKSRFM 143

Query: 120 TPKEEATFSWYLKERARIEGVRTEM----GGQELSSSQWAKAAG 1
           T KEEA FSWYLKERARI  V+TE+    G +E+SSSQWAKAAG
Sbjct: 144 TSKEEARFSWYLKERARIVAVKTELLAETGRREVSSSQWAKAAG 187


>gb|PIN23635.1| hypothetical protein CDL12_03626 [Handroanthus impetiginosus]
          Length = 411

 Score = 99.0 bits (245), Expect = 2e-21
 Identities = 71/152 (46%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
 Frame = -1

Query: 441 TDSYLKVSSYASPLAHTHYSIQEDELMISSGELSGAATAPARKSENILDRNGSENDVKNR 262
           T SY+KVSSY SPL +TH               S +    ++  EN L   G ++DV+  
Sbjct: 28  TKSYIKVSSYISPLTYTH---------------SSSNYTCSKVQENALIIPG-QSDVRRE 71

Query: 261 EHYWCNEDTFXXXXXXXXR-SILECVKTDLEDDKFVFVDKKAGKSRFMTPKEEATFSWYL 85
           +  WCN            R S LE V    E D+ VF D K G+SR MTPKEEA  SWYL
Sbjct: 72  Q--WCNGAAVRRKKRRRRRKSDLEFVYD--EGDEVVFGDNKGGRSRVMTPKEEARCSWYL 127

Query: 84  KERARIEGVRTE----MGGQELSSSQWAKAAG 1
           KERARIE VR E    MGG  LS+SQWAKAAG
Sbjct: 128 KERARIEAVRAELEADMGGHGLSTSQWAKAAG 159


>ref|XP_012849780.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X2 [Erythranthe guttata]
          Length = 436

 Score = 93.2 bits (230), Expect = 3e-19
 Identities = 69/169 (40%), Positives = 89/169 (52%), Gaps = 24/169 (14%)
 Frame = -1

Query: 435 SYLKVSS----------YASPLAHTHYS---IQEDELMISSGELSGAATAPARKSENILD 295
           SYLK+ S          Y+SP + ++Y+   ++E+E       L G  TA      + LD
Sbjct: 27  SYLKLISIYNLSNNPLLYSSPHSSSNYACVTVREEE-----DPLIGIETA------SFLD 75

Query: 294 RNGSENDVKNREHYWCNEDTFXXXXXXXXR-SILECVKTDLEDD----KFVFVDKKAGKS 130
                     REH+W N            R ++LEC+  D +DD    KF+F DK +GKS
Sbjct: 76  VKEERESEVEREHFWRNGVAIRRKRRRRRRINLLECMNIDDDDDYQNHKFLFSDKNSGKS 135

Query: 129 RFMTPKEEATFSWYLKERARIEGVRTEMGGQ------ELSSSQWAKAAG 1
           RFM PKEEA FSW+L+ERARIE VRTE   +      ELSS QWA AAG
Sbjct: 136 RFMNPKEEAKFSWHLQERARIEAVRTEALAKMEEEEHELSSIQWANAAG 184


>ref|XP_012849779.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X1 [Erythranthe guttata]
          Length = 487

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 69/169 (40%), Positives = 89/169 (52%), Gaps = 24/169 (14%)
 Frame = -1

Query: 435 SYLKVSS----------YASPLAHTHYS---IQEDELMISSGELSGAATAPARKSENILD 295
           SYLK+ S          Y+SP + ++Y+   ++E+E       L G  TA      + LD
Sbjct: 27  SYLKLISIYNLSNNPLLYSSPHSSSNYACVTVREEE-----DPLIGIETA------SFLD 75

Query: 294 RNGSENDVKNREHYWCNEDTFXXXXXXXXR-SILECVKTDLEDD----KFVFVDKKAGKS 130
                     REH+W N            R ++LEC+  D +DD    KF+F DK +GKS
Sbjct: 76  VKEERESEVEREHFWRNGVAIRRKRRRRRRINLLECMNIDDDDDYQNHKFLFSDKNSGKS 135

Query: 129 RFMTPKEEATFSWYLKERARIEGVRTEMGGQ------ELSSSQWAKAAG 1
           RFM PKEEA FSW+L+ERARIE VRTE   +      ELSS QWA AAG
Sbjct: 136 RFMNPKEEAKFSWHLQERARIEAVRTEALAKMEEEEHELSSIQWANAAG 184


>gb|EYU27026.1| hypothetical protein MIMGU_mgv1a021187mg [Erythranthe guttata]
          Length = 355

 Score = 64.3 bits (155), Expect = 5e-09
 Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 18/136 (13%)
 Frame = -1

Query: 435 SYLKVSS----------YASPLAHTHYS---IQEDELMISSGELSGAATAPARKSENILD 295
           SYLK+ S          Y+SP + ++Y+   ++E+E       L G  TA      + LD
Sbjct: 22  SYLKLISIYNLSNNPLLYSSPHSSSNYACVTVREEE-----DPLIGIETA------SFLD 70

Query: 294 RNGSENDVKNREHYWCNEDTFXXXXXXXXR-SILECVKTDLEDD----KFVFVDKKAGKS 130
                     REH+W N            R ++LEC+  D +DD    KF+F DK +GKS
Sbjct: 71  VKEERESEVEREHFWRNGVAIRRKRRRRRRINLLECMNIDDDDDYQNHKFLFSDKNSGKS 130

Query: 129 RFMTPKEEATFSWYLK 82
           RFM PKEEA FSW+L+
Sbjct: 131 RFMNPKEEAKFSWHLQ 146


>ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Nelumbo
           nucifera]
          Length = 455

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
 Frame = -1

Query: 180 DLEDDKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSSQWAK 10
           DL ++       +  +S ++TPKEEA FS YLKE AR+E  RT   E    E +SSQWA+
Sbjct: 140 DLSNNCMESCSFRPSRSMYLTPKEEAEFSLYLKEEARLEAARTRLRETNEHEPTSSQWAE 199

Query: 9   AAG 1
           AAG
Sbjct: 200 AAG 202