BLASTX nr result

ID: Rehmannia31_contig00018599 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00018599
         (629 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAV86123.1| Usp domain-containing protein, partial [Cephalot...    55   7e-06

>dbj|GAV86123.1| Usp domain-containing protein, partial [Cephalotus follicularis]
          Length = 179

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 31/72 (43%), Positives = 43/72 (59%)
 Frame = +1

Query: 208 SLYEDEEFDRQELVALLLSKWLATAVTHAGGIVTPI*TLILHGDP*DTICRAGK*LHIDL 387
           SL E     ++E  A+LLS+ L     + G  +     +I HGDP D IC+A + +HIDL
Sbjct: 83  SLVESVRKAQEENTAVLLSRALQLCKENMGNPLIKAEGIIQHGDPKDMICQAAEEMHIDL 142

Query: 388 VVPGSRGLGTIK 423
           +V GSRGLG +K
Sbjct: 143 LVVGSRGLGKLK 154


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