BLASTX nr result

ID: Rehmannia31_contig00018441 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00018441
         (1030 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF51216.1| conserved hypothetical protein [Ricinus communis]       65   5e-08

>gb|EEF51216.1| conserved hypothetical protein [Ricinus communis]
          Length = 358

 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
 Frame = +2

Query: 170 QTIHLIQVYTGYNKNGGTV---TYSYVPENYRSLIQAMITFVIFLHDKAHKSLLNGFSGQ 340
           +TI+ I  Y   ++ G T+   T +YVP  YR LI++M+TFV+ +HD  + +   GF   
Sbjct: 87  ETINPIARYPIPHRQGPTIPSHTANYVPNEYRKLIKSMVTFVVDIHDAGYSTA--GFGMP 144

Query: 341 NLVVLDGTLKFWKVAFTDPTPVTMKNDFIICSRI 442
           N+V+ +  +KFWKV F   +  +  NDFI   R+
Sbjct: 145 NIVIKNEVVKFWKVQFITASMGSKNNDFICLHRV 178


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