BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00018325
         (463 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU37771.1| hypothetical protein TSUD_102880 [Trifolium subt...   137   5e-48
dbj|GAU31768.1| hypothetical protein TSUD_22140 [Trifolium subte...   129   3e-45
gb|PNX96363.1| ribonuclease H, partial [Trifolium pratense]           128   2e-42
gb|KYP66749.1| LINE-1 reverse transcriptase isogeny, partial [Ca...   116   5e-42
gb|KYP73928.1| hypothetical protein KK1_006587, partial [Cajanus...   116   5e-42
gb|KYP48474.1| hypothetical protein KK1_029849 [Cajanus cajan]        115   3e-41
gb|KYP48455.1| hypothetical protein KK1_029830 [Cajanus cajan]        115   3e-41
dbj|GAU21128.1| hypothetical protein TSUD_10450 [Trifolium subte...   124   9e-41
dbj|GAU44059.1| hypothetical protein TSUD_399580 [Trifolium subt...   121   5e-40
dbj|GAU20068.1| hypothetical protein TSUD_381600 [Trifolium subt...   116   1e-37
gb|KYP48093.1| Transposon TX1 uncharacterized [Cajanus cajan]         119   3e-36
gb|PNX85223.1| ribonuclease H [Trifolium pratense]                    122   4e-36
dbj|GAU18648.1| hypothetical protein TSUD_124810 [Trifolium subt...   103   8e-36
dbj|GAU34840.1| hypothetical protein TSUD_259200 [Trifolium subt...   101   8e-36
gb|PNY17656.1| ribonuclease H, partial [Trifolium pratense]           104   1e-35
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   112   2e-35
gb|PNX97216.1| ribonuclease H, partial [Trifolium pratense]           106   4e-35
gb|PNX92150.1| ribonuclease H [Trifolium pratense]                    105   4e-35
gb|PNX97372.1| ribonuclease H, partial [Trifolium pratense]           106   7e-35
gb|PNX72609.1| ribonuclease H, partial [Trifolium pratense]           102   7e-35

>dbj|GAU37771.1| hypothetical protein TSUD_102880 [Trifolium subterraneum]
          Length = 1688

 Score =  137 bits (346), Expect(2) = 5e-48
 Identities = 59/82 (71%), Positives = 74/82 (90%)
 Frame = +1

Query: 214  QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
            +K++AIFNY+RDR+WKRIQ WSGK +S+AG+EVLIK+VAQ+IP +CMSVFLLP TL EE+
Sbjct: 1136 RKKKAIFNYIRDRIWKRIQNWSGKHLSKAGREVLIKSVAQSIPTYCMSVFLLPTTLGEEI 1195

Query: 394  QRMLNSFWWGSKKNDERSINWM 459
            QRMLNSFWWGS +N+ R INW+
Sbjct: 1196 QRMLNSFWWGSNRNNGRGINWL 1217



 Score = 81.3 bits (199), Expect(2) = 5e-48
 Identities = 37/75 (49%), Positives = 55/75 (73%)
 Frame = +2

Query: 2    FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
            FC+A+ERE  +L E LKK+EEA+G AIN+ KS IL S N + + K ++ NIL V++ + +
Sbjct: 1065 FCRAEEREATILVEALKKYEEASGQAINMQKSEILFSKNTSGELKEKVQNILQVTESMGS 1124

Query: 182  GRYLGLPSLIGRNNE 226
             +YLGLPS++GR  +
Sbjct: 1125 NKYLGLPSMVGRKKK 1139


>dbj|GAU31768.1| hypothetical protein TSUD_22140 [Trifolium subterraneum]
          Length = 1601

 Score =  129 bits (324), Expect(2) = 3e-45
 Identities = 55/82 (67%), Positives = 70/82 (85%)
 Frame = +1

Query: 214  QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
            +K++AIF YLRDR+WKRIQ WSGK +S+AG+EVLIK+VAQ+IP +CMS FLLP TL EE+
Sbjct: 1032 RKKKAIFGYLRDRVWKRIQQWSGKHLSKAGREVLIKSVAQSIPTYCMSTFLLPTTLGEEI 1091

Query: 394  QRMLNSFWWGSKKNDERSINWM 459
            QRM+NSFWWG+ +   R INW+
Sbjct: 1092 QRMINSFWWGTNRRQGRGINWL 1113



 Score = 80.5 bits (197), Expect(2) = 3e-45
 Identities = 38/75 (50%), Positives = 51/75 (68%)
 Frame = +2

Query: 2    FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
            FC+ADE ECN L++IL+++EE +G AINL KS I  S N     KN I  I  V + L +
Sbjct: 961  FCRADENECNKLRDILRQYEEISGQAINLQKSEIFFSKNTKETVKNTIKQIFQVEEGLGS 1020

Query: 182  GRYLGLPSLIGRNNE 226
            G+YLGLPS++GR  +
Sbjct: 1021 GKYLGLPSIVGRKKK 1035


>gb|PNX96363.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1103

 Score =  128 bits (321), Expect(2) = 2e-42
 Identities = 54/83 (65%), Positives = 70/83 (84%)
 Frame = +1

Query: 214  QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
            + ++A+F YL+DRMWK+IQ WSGK +S+AG+EVL+K+VAQAIP +CMS  LLP +L EEL
Sbjct: 1010 RNKKAMFGYLKDRMWKKIQSWSGKHLSKAGREVLVKSVAQAIPAYCMSTILLPESLGEEL 1069

Query: 394  QRMLNSFWWGSKKNDERSINWMR 462
            +RM+NSFWWGS KN  R INW+R
Sbjct: 1070 ERMINSFWWGSNKNTGRGINWLR 1092



 Score = 72.4 bits (176), Expect(2) = 2e-42
 Identities = 35/73 (47%), Positives = 48/73 (65%)
 Frame = +2

Query: 8    KADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNTGR 187
            + D RE   +K+IL  +E+A+G AIN  KS +  S N   + K  I +ILGV + L TGR
Sbjct: 941  RQDVREAQCMKKILNVYEKASGQAINYAKSEVYFSRNTPNNMKESISDILGVKEVLGTGR 1000

Query: 188  YLGLPSLIGRNNE 226
            YLG+PS+IGRN +
Sbjct: 1001 YLGMPSMIGRNKK 1013


>gb|KYP66749.1| LINE-1 reverse transcriptase isogeny, partial [Cajanus cajan]
          Length = 816

 Score =  116 bits (290), Expect(2) = 5e-42
 Identities = 48/82 (58%), Positives = 67/82 (81%)
 Frame = +1

Query: 214 QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
           + ++A+F+Y++DR+WK+I  W+GK +S+AG+E LIKAVAQAIP +CMS FLLP +L +E+
Sbjct: 272 RNKKAVFSYVKDRIWKKINHWTGKHLSKAGRETLIKAVAQAIPSYCMSTFLLPTSLEDEI 331

Query: 394 QRMLNSFWWGSKKNDERSINWM 459
           QRMLNSFWWGS  +  R I W+
Sbjct: 332 QRMLNSFWWGSNHHTGRGIKWL 353



 Score = 82.8 bits (203), Expect(2) = 5e-42
 Identities = 40/75 (53%), Positives = 52/75 (69%)
 Frame = +2

Query: 2   FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
           FCKA EREC  L+ IL+++E A+G AINL KS I  S N T   +  I  ILGV + + T
Sbjct: 201 FCKATERECTTLRTILQQYESASGQAINLQKSEIYYSKNTTTRTRTSINAILGVHECIGT 260

Query: 182 GRYLGLPSLIGRNNE 226
           G+YLGLPS++GRN +
Sbjct: 261 GKYLGLPSMVGRNKK 275


>gb|KYP73928.1| hypothetical protein KK1_006587, partial [Cajanus cajan]
          Length = 421

 Score =  116 bits (290), Expect(2) = 5e-42
 Identities = 48/82 (58%), Positives = 67/82 (81%)
 Frame = +1

Query: 214 QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
           + ++A+F+Y++DR+WK+I  W+GK +S+AG+E LIKAVAQAIP +CMS FLLP +L +E+
Sbjct: 224 RNKKAVFSYVKDRIWKKINHWTGKHLSKAGRETLIKAVAQAIPSYCMSTFLLPTSLEDEI 283

Query: 394 QRMLNSFWWGSKKNDERSINWM 459
           QRMLNSFWWGS  +  R I W+
Sbjct: 284 QRMLNSFWWGSNHHTGRGIKWL 305



 Score = 82.8 bits (203), Expect(2) = 5e-42
 Identities = 40/75 (53%), Positives = 52/75 (69%)
 Frame = +2

Query: 2   FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
           FCKA EREC  L+ IL+++E A+G AINL KS I  S N T   +  I  ILGV + + T
Sbjct: 153 FCKATERECTTLRTILQQYESASGQAINLQKSEIYYSKNTTTRTRTSINAILGVHECIGT 212

Query: 182 GRYLGLPSLIGRNNE 226
           G+YLGLPS++GRN +
Sbjct: 213 GKYLGLPSMVGRNKK 227


>gb|KYP48474.1| hypothetical protein KK1_029849 [Cajanus cajan]
          Length = 547

 Score =  115 bits (287), Expect(2) = 3e-41
 Identities = 48/82 (58%), Positives = 66/82 (80%)
 Frame = +1

Query: 214 QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
           + +RA+F+Y++DR+WK+I  W+GK +S+A +E LIKAVAQAIP +CMS FLLP +L +E+
Sbjct: 135 RNKRAVFSYVKDRIWKKINHWTGKHLSKASRETLIKAVAQAIPSYCMSTFLLPTSLEDEI 194

Query: 394 QRMLNSFWWGSKKNDERSINWM 459
           QRMLNSFWWGS  +  R I W+
Sbjct: 195 QRMLNSFWWGSNHHTGRGIKWL 216



 Score = 81.3 bits (199), Expect(2) = 3e-41
 Identities = 40/73 (54%), Positives = 51/73 (69%)
 Frame = +2

Query: 2   FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
           FCKA EREC  L+ IL+++E A+G AINL KS I  S N T   +  I  ILGV + + T
Sbjct: 64  FCKAIERECTTLRTILQQYESASGQAINLQKSEIYYSKNTTTRTRTSINAILGVHKCIGT 123

Query: 182 GRYLGLPSLIGRN 220
           G+YLGLPS++GRN
Sbjct: 124 GKYLGLPSMVGRN 136


>gb|KYP48455.1| hypothetical protein KK1_029830 [Cajanus cajan]
          Length = 536

 Score =  115 bits (287), Expect(2) = 3e-41
 Identities = 48/82 (58%), Positives = 66/82 (80%)
 Frame = +1

Query: 214 QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
           + +RA+F+Y++DR+WK+I  W+GK +S+A +E LIKAVAQAIP +CMS FLLP +L +E+
Sbjct: 135 RNKRAVFSYVKDRIWKKINHWTGKHLSKASRETLIKAVAQAIPSYCMSTFLLPTSLEDEI 194

Query: 394 QRMLNSFWWGSKKNDERSINWM 459
           QRMLNSFWWGS  +  R I W+
Sbjct: 195 QRMLNSFWWGSNHHTGRGIKWL 216



 Score = 81.3 bits (199), Expect(2) = 3e-41
 Identities = 40/73 (54%), Positives = 51/73 (69%)
 Frame = +2

Query: 2   FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
           FCKA EREC  L+ IL+++E A+G AINL KS I  S N T   +  I  ILGV + + T
Sbjct: 64  FCKAIERECTTLRTILQQYESASGQAINLQKSEIYYSKNTTTRTRTSINAILGVHKCIGT 123

Query: 182 GRYLGLPSLIGRN 220
           G+YLGLPS++GRN
Sbjct: 124 GKYLGLPSMVGRN 136


>dbj|GAU21128.1| hypothetical protein TSUD_10450 [Trifolium subterraneum]
          Length = 456

 Score =  124 bits (311), Expect(2) = 9e-41
 Identities = 53/83 (63%), Positives = 71/83 (85%)
 Frame = +1

Query: 214 QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
           + +++IFNYL+DR+WK+   WS K++SRAGKEVLIK+VAQAIP +CM  FLLP +L+EE+
Sbjct: 157 RSKKSIFNYLKDRIWKKCHSWSAKSLSRAGKEVLIKSVAQAIPSYCMGAFLLPKSLSEEI 216

Query: 394 QRMLNSFWWGSKKNDERSINWMR 462
           +RMLNSF+WGSKK+  R INW+R
Sbjct: 217 ERMLNSFYWGSKKDGRRGINWLR 239



 Score = 70.5 bits (171), Expect(2) = 9e-41
 Identities = 35/75 (46%), Positives = 48/75 (64%)
 Frame = +2

Query: 2   FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
           FCKA   E   LK+IL  +E+A+G AIN  K  I  S NV       + + LGV+QP+ +
Sbjct: 86  FCKATLAEVQCLKDILITYEQASGQAINYGKCAIAFSKNVNSHDVASLSSALGVTQPIGS 145

Query: 182 GRYLGLPSLIGRNNE 226
           G+YLGLPS+IGR+ +
Sbjct: 146 GKYLGLPSMIGRSKK 160


>dbj|GAU44059.1| hypothetical protein TSUD_399580 [Trifolium subterraneum]
          Length = 1229

 Score =  121 bits (304), Expect(2) = 5e-40
 Identities = 49/83 (59%), Positives = 72/83 (86%)
 Frame = +1

Query: 214 QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
           + +++IF++++DR+WK+IQ W+ +++SRAGKEVLIKAVAQA+P +CM  FLLP TL EE+
Sbjct: 633 RNKKSIFSFIKDRIWKKIQNWNSRSLSRAGKEVLIKAVAQAVPSYCMGAFLLPTTLGEEI 692

Query: 394 QRMLNSFWWGSKKNDERSINWMR 462
           +RM+NSF+WG+KK+  R INW+R
Sbjct: 693 ERMMNSFYWGTKKHGGRGINWLR 715



 Score = 70.9 bits (172), Expect(2) = 5e-40
 Identities = 36/75 (48%), Positives = 48/75 (64%)
 Frame = +2

Query: 2   FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
           FCKA+  E   LK IL  +E A+G AIN  KS I  S N   + +  I N+LGV++ +  
Sbjct: 562 FCKANLSEVTTLKTILDTYEAASGQAINYQKSAIAYSRNTDANGQVAITNLLGVAELMGN 621

Query: 182 GRYLGLPSLIGRNNE 226
           G+YLGLPS+IGRN +
Sbjct: 622 GKYLGLPSMIGRNKK 636


>dbj|GAU20068.1| hypothetical protein TSUD_381600 [Trifolium subterraneum]
          Length = 573

 Score =  116 bits (291), Expect(2) = 1e-37
 Identities = 49/81 (60%), Positives = 69/81 (85%)
 Frame = +1

Query: 220 QRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEELQR 399
           +++IF++++DR+WK+IQ W+ +++SRAGKEVLIKAVAQAIP +CMS FL+  TL EE++R
Sbjct: 99  KKSIFSFIKDRIWKKIQNWNSRSLSRAGKEVLIKAVAQAIPSYCMSSFLILTTLGEEIER 158

Query: 400 MLNSFWWGSKKNDERSINWMR 462
           M+NSF+W  KKN  R INW+R
Sbjct: 159 MMNSFYWNMKKNGGRGINWLR 179



 Score = 67.8 bits (164), Expect(2) = 1e-37
 Identities = 35/75 (46%), Positives = 47/75 (62%)
 Frame = +2

Query: 2   FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
           FCKA   E   LK +L  +E A+G AIN  KS I  S N   + ++ I NILGV + +  
Sbjct: 26  FCKASVSEVTNLKHVLDTYEAASGQAINYQKSAIAYSRNTEANCRSFINNILGVVESMGH 85

Query: 182 GRYLGLPSLIGRNNE 226
           G+YLGLPS+IGR+ +
Sbjct: 86  GKYLGLPSMIGRDKK 100


>gb|KYP48093.1| Transposon TX1 uncharacterized [Cajanus cajan]
          Length = 748

 Score =  119 bits (298), Expect(2) = 3e-36
 Identities = 49/82 (59%), Positives = 67/82 (81%)
 Frame = +1

Query: 214 QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
           +K++A+FN ++DR+WKRIQ W GK +S+AG+EVLIK+VAQ+IP +CM VFL+P  L EE+
Sbjct: 423 RKKKALFNQIKDRIWKRIQSWKGKHLSKAGREVLIKSVAQSIPTYCMGVFLIPTYLGEEI 482

Query: 394 QRMLNSFWWGSKKNDERSINWM 459
           QRML SFWWGS K   + I+W+
Sbjct: 483 QRMLKSFWWGSNKKRNKGIHWL 504



 Score = 60.5 bits (145), Expect(2) = 3e-36
 Identities = 31/75 (41%), Positives = 46/75 (61%)
 Frame = +2

Query: 2   FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
           F KA  R+C+ L+EIL  +E A+G +IN  KS I  S N     +  I + L +++ + T
Sbjct: 352 FSKATPRDCSKLREILDLYERASGQSINFQKSEIFYSRNTPNSIRISINSELHITEIIGT 411

Query: 182 GRYLGLPSLIGRNNE 226
            +YLGLPS+IGR  +
Sbjct: 412 DKYLGLPSMIGRKKK 426


>gb|PNX85223.1| ribonuclease H [Trifolium pratense]
          Length = 173

 Score =  122 bits (306), Expect(2) = 4e-36
 Identities = 50/84 (59%), Positives = 68/84 (80%)
 Frame = +1

Query: 211 WQKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEE 390
           W+ ++A+F Y +DRMWK+IQ WSGK +S+AG+EVL+K VAQ IP +CMS  LLP +L +E
Sbjct: 60  WRNKKALFGYFKDRMWKKIQNWSGKHLSKAGREVLVKFVAQEIPAYCMSSILLPESLGDE 119

Query: 391 LQRMLNSFWWGSKKNDERSINWMR 462
           L++M+NSFWWGS K+  R INW+R
Sbjct: 120 LEKMINSFWWGSNKSFGRGINWLR 143



 Score = 57.0 bits (136), Expect(2) = 4e-36
 Identities = 28/64 (43%), Positives = 40/64 (62%)
 Frame = +2

Query: 35  LKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNTGRYLGLPSLIG 214
           +K IL K+E+A G AIN +KS +  S N   D K  +  IL V++ + TGRYL + S+I 
Sbjct: 1   MKRILNKYEKALGQAINYSKSEVYFSRNTPSDIKGNVSEILRVTEVMGTGRYLDMSSMIW 60

Query: 215 RNNE 226
           RN +
Sbjct: 61  RNKK 64


>dbj|GAU18648.1| hypothetical protein TSUD_124810 [Trifolium subterraneum]
          Length = 1742

 Score =  103 bits (258), Expect(2) = 8e-36
 Identities = 42/82 (51%), Positives = 65/82 (79%)
 Frame = +1

Query: 214  QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
            +K++ +F +++DR+WKRI  W G+A+SRAGKE++IK+V QAIP + MSV+LLP T+  ++
Sbjct: 1212 RKKKDVFAFIKDRVWKRINSWRGRALSRAGKEIMIKSVLQAIPTYIMSVYLLPDTIIRDI 1271

Query: 394  QRMLNSFWWGSKKNDERSINWM 459
            +RM+NSFWWG   N+ + I W+
Sbjct: 1272 ERMMNSFWWGGGANN-KGIKWL 1292



 Score = 74.3 bits (181), Expect(2) = 8e-36
 Identities = 36/75 (48%), Positives = 49/75 (65%)
 Frame = +2

Query: 2    FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
            FC+A   E N L +ILK +EEA+G  INL+KS +  S N++   +  + NI+GV   L T
Sbjct: 1141 FCRATIAEANQLMQILKTYEEASGQEINLSKSEVFFSRNLSRAAQEDLSNIMGVRHVLGT 1200

Query: 182  GRYLGLPSLIGRNNE 226
            G YLGLPS+IGR  +
Sbjct: 1201 GNYLGLPSMIGRKKK 1215


>dbj|GAU34840.1| hypothetical protein TSUD_259200 [Trifolium subterraneum]
          Length = 1122

 Score =  101 bits (252), Expect(2) = 8e-36
 Identities = 42/82 (51%), Positives = 64/82 (78%)
 Frame = +1

Query: 214 QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
           +K++  F Y++DR+WK+I  W G+A+S+AGKEV+IK+V QAIP + MSV+L+P T  +E+
Sbjct: 633 RKKKETFGYVKDRIWKKINSWRGRALSKAGKEVMIKSVLQAIPSYVMSVYLIPETTIKEI 692

Query: 394 QRMLNSFWWGSKKNDERSINWM 459
           +RM+NSFWWG   ++ R I W+
Sbjct: 693 ERMMNSFWWGGGSHN-RGIKWL 713



 Score = 76.6 bits (187), Expect(2) = 8e-36
 Identities = 34/75 (45%), Positives = 52/75 (69%)
 Frame = +2

Query: 2   FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
           FC+A+  E N LK ILK +EEA+G  IN++KS +  S N++++ +  +  I+GV   L T
Sbjct: 562 FCRANAEEVNQLKTILKTYEEASGQEINMSKSEVFFSRNLSVEAQEDLSRIMGVRHVLGT 621

Query: 182 GRYLGLPSLIGRNNE 226
           G+YLGLPS++GR  +
Sbjct: 622 GKYLGLPSMVGRKKK 636


>gb|PNY17656.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1291

 Score =  104 bits (259), Expect(2) = 1e-35
 Identities = 44/82 (53%), Positives = 65/82 (79%)
 Frame = +1

Query: 214  QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
            +K+R IF+Y++DR+WKRI  W G+A+S+AGKEV+IK+V QAIP + MSV+LLP +   ++
Sbjct: 1062 RKKRDIFSYIKDRVWKRINSWRGRALSKAGKEVMIKSVLQAIPSYVMSVYLLPESTIRDI 1121

Query: 394  QRMLNSFWWGSKKNDERSINWM 459
            +RM+NSFWWG   N+ + I W+
Sbjct: 1122 ERMMNSFWWGGGANN-KGIRWL 1142



 Score = 73.6 bits (179), Expect(2) = 1e-35
 Identities = 35/72 (48%), Positives = 50/72 (69%)
 Frame = +2

Query: 2    FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
            FC+A+  E N L +ILK +EEA+G  INL+KS +  S N+++  ++ +  I+GV   L T
Sbjct: 991  FCRANLNETNHLMQILKTYEEASGQEINLSKSEVFFSRNLSIAAQDDLARIMGVKHVLGT 1050

Query: 182  GRYLGLPSLIGR 217
            G YLGLPS+IGR
Sbjct: 1051 GNYLGLPSMIGR 1062


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score =  112 bits (281), Expect(2) = 2e-35
 Identities = 48/82 (58%), Positives = 66/82 (80%)
 Frame = +1

Query: 214 QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
           + +++IFNY++DR+W RI G S K +S+AGKEVLIK+VAQAIP +CMSVFLLP ++A+++
Sbjct: 351 RSKKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFLLPHSIADDI 410

Query: 394 QRMLNSFWWGSKKNDERSINWM 459
           ++MLNSFWWG K      I WM
Sbjct: 411 EKMLNSFWWGMKNEGRGGIRWM 432



 Score = 63.9 bits (154), Expect(2) = 2e-35
 Identities = 32/75 (42%), Positives = 48/75 (64%)
 Frame = +2

Query: 2   FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
           F +A+E E   LK+IL  +  A+   IN+ KS I  S NV + +KN + N+L VS+ +  
Sbjct: 280 FFRANENETRALKDILDTYANASDQLINMQKSEIYFSRNVPVTKKNTLSNMLWVSEGIGI 339

Query: 182 GRYLGLPSLIGRNNE 226
            +YLGLPS+IGR+ +
Sbjct: 340 RKYLGLPSMIGRSKK 354


>gb|PNX97216.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1094

 Score =  106 bits (265), Expect(2) = 4e-35
 Identities = 45/82 (54%), Positives = 64/82 (78%)
 Frame = +1

Query: 214 QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
           +K+R +F Y++DR+WKRI  W G+A+SRAGKE++IK+V QAIP + MSV+LLP T   E+
Sbjct: 526 RKKRDVFGYVKDRIWKRINSWRGRALSRAGKEIMIKSVLQAIPSYVMSVYLLPETTINEI 585

Query: 394 QRMLNSFWWGSKKNDERSINWM 459
           +RM+NSFWWG   N++  I W+
Sbjct: 586 ERMMNSFWWGGGANNQ-GIRWL 606



 Score = 69.3 bits (168), Expect(2) = 4e-35
 Identities = 34/72 (47%), Positives = 48/72 (66%)
 Frame = +2

Query: 2   FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
           FC++   E   L +ILK +E+A+G  INLTKS +  S N+++  +  +  I+GV   L T
Sbjct: 455 FCRSSLDETLHLMQILKIYEQASGQEINLTKSEVFFSRNLSISAQEDLSKIMGVRHVLGT 514

Query: 182 GRYLGLPSLIGR 217
           GRYLGLPS+IGR
Sbjct: 515 GRYLGLPSMIGR 526


>gb|PNX92150.1| ribonuclease H [Trifolium pratense]
          Length = 682

 Score =  105 bits (263), Expect(2) = 4e-35
 Identities = 39/82 (47%), Positives = 67/82 (81%)
 Frame = +1

Query: 214 QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
           + ++A+F+Y++DR+WKRI  W G+A+S+AGKEV+IK+V QAIP + MS+++LP +  +++
Sbjct: 320 RSKKAVFSYIKDRIWKRINSWRGRALSKAGKEVMIKSVLQAIPAYVMSMYILPSSFVDDI 379

Query: 394 QRMLNSFWWGSKKNDERSINWM 459
           ++M+N+FWWG   +  RSI+W+
Sbjct: 380 EKMINAFWWGGGNSHGRSIHWL 401



 Score = 70.1 bits (170), Expect(2) = 4e-35
 Identities = 33/75 (44%), Positives = 50/75 (66%)
 Frame = +2

Query: 2   FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
           FC+A+  E N L  IL  +E+A+G  INL+KS + +S N++   ++ +  ILGV   L T
Sbjct: 249 FCRANAAEVNQLLSILHTYEQASGQEINLSKSEVFISRNMSQAAQSDLAGILGVRHALGT 308

Query: 182 GRYLGLPSLIGRNNE 226
           G YLGLPS++GR+ +
Sbjct: 309 GVYLGLPSMVGRSKK 323


>gb|PNX97372.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1023

 Score =  106 bits (264), Expect(2) = 7e-35
 Identities = 46/82 (56%), Positives = 65/82 (79%)
 Frame = +1

Query: 214  QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
            +K+R IF Y++DR+WKRI  W G+A+S+AGKEV+IK+V QAIP + MSV+LLP T  +E+
Sbjct: 901  RKKRDIFAYIKDRIWKRINSWRGRALSKAGKEVMIKSVLQAIPSYVMSVYLLPETTIKEI 960

Query: 394  QRMLNSFWWGSKKNDERSINWM 459
            +RM+NSFWWG   N+ + I W+
Sbjct: 961  ERMMNSFWWGGGANN-KGIKWL 981



 Score = 68.9 bits (167), Expect(2) = 7e-35
 Identities = 33/72 (45%), Positives = 47/72 (65%)
 Frame = +2

Query: 2    FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
            FC+++  E N L +IL+ +E A G  IN+TKS +  S N++   +  + NI+GV   L T
Sbjct: 830  FCRSNLSETNHLMQILRTYENATGQEINMTKSEVFFSRNLSKAAQEDLSNIMGVRHVLCT 889

Query: 182  GRYLGLPSLIGR 217
            G YLGLPS+IGR
Sbjct: 890  GNYLGLPSMIGR 901


>gb|PNX72609.1| ribonuclease H, partial [Trifolium pratense]
          Length = 938

 Score =  102 bits (255), Expect(2) = 7e-35
 Identities = 42/82 (51%), Positives = 65/82 (79%)
 Frame = +1

Query: 214 QKQRAIFNYLRDRMWKRIQGWSGKAISRAGKEVLIKAVAQAIPVFCMSVFLLPVTLAEEL 393
           +K++ +F+YL+DR+WKRI  W G+ +SRAGKE++IK+V Q+IP + MSV+LLP +  +++
Sbjct: 489 RKKKQVFSYLKDRVWKRINSWRGRPLSRAGKEIMIKSVLQSIPSYVMSVYLLPESTIKDI 548

Query: 394 QRMLNSFWWGSKKNDERSINWM 459
           +RMLNSFWWG   N+ + I W+
Sbjct: 549 ERMLNSFWWGGGTNN-KGIRWL 569



 Score = 72.4 bits (176), Expect(2) = 7e-35
 Identities = 34/75 (45%), Positives = 48/75 (64%)
 Frame = +2

Query: 2   FCKADERECNVLKEILKKFEEAAGLAINLTKSGILLSNNVTMDQKNQIFNILGVSQPLNT 181
           FC++   E N L  ILK +EEAAG  +NL KS +  S N+++  +  +  I+GV + L T
Sbjct: 418 FCRSTVAETNQLMSILKLYEEAAGQEVNLAKSEVFFSRNISVADQEDLSKIMGVKRVLGT 477

Query: 182 GRYLGLPSLIGRNNE 226
           G YLGLPS+IGR  +
Sbjct: 478 GTYLGLPSMIGRKKK 492