BLASTX nr result
ID: Rehmannia31_contig00017909
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00017909
(400 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AOX49855.1| RNA polymerase-associated protein RTF1-like prote... 150 1e-44
ref|XP_011096256.1| protein RTF1 homolog [Sesamum indicum] 163 1e-44
gb|PIN01176.1| Paf1/RNA polymerase II complex, RTF1 component (i... 157 1e-42
gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythra... 154 2e-41
ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe... 154 2e-41
ref|XP_023924078.1| protein RTF1 homolog [Quercus suber] 153 6e-41
ref|XP_015872019.1| PREDICTED: protein RTF1 homolog, partial [Zi... 153 7e-41
ref|XP_022845927.1| protein RTF1 homolog [Olea europaea var. syl... 151 3e-40
gb|PON96093.1| RNA polymerase-associated protein Rtf [Trema orie... 151 4e-40
gb|PON36800.1| RNA polymerase-associated protein Rtf [Parasponia... 151 4e-40
ref|XP_022136687.1| protein RTF1 homolog [Momordica charantia] 150 1e-39
gb|KZV47798.1| hypothetical protein F511_41277 [Dorcoceras hygro... 147 8e-39
ref|XP_022941904.1| protein RTF1 homolog [Cucurbita moschata] >g... 147 1e-38
ref|XP_003529309.1| PREDICTED: protein RTF1 homolog [Glycine max... 147 1e-38
gb|PPS04900.1| hypothetical protein GOBAR_AA15766 [Gossypium bar... 139 2e-38
ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: protein RTF1... 146 3e-38
ref|XP_023534918.1| protein RTF1 homolog [Cucurbita pepo subsp. ... 146 3e-38
ref|XP_023522521.1| protein RTF1 homolog isoform X2 [Cucurbita p... 146 3e-38
ref|XP_022979530.1| protein RTF1 homolog [Cucurbita maxima] >gi|... 146 3e-38
ref|XP_010100559.1| protein RTF1 homolog [Morus notabilis] >gi|5... 146 3e-38
>gb|AOX49855.1| RNA polymerase-associated protein RTF1-like protein, partial [Ilex
paraguariensis]
Length = 117
Score = 150 bits (380), Expect = 1e-44
Identities = 74/82 (90%), Positives = 77/82 (93%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDTSAPVDQGTESN+LHNFELPISLA LQKFGGPQGAQAGFMARKQ+IEA G +VPE
Sbjct: 36 KLVDTSAPVDQGTESNMLHNFELPISLAALQKFGGPQGAQAGFMARKQRIEATVGCQVPE 95
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTLTV DYKRRRGLL
Sbjct: 96 NDGRRHALTLTVGDYKRRRGLL 117
>ref|XP_011096256.1| protein RTF1 homolog [Sesamum indicum]
Length = 627
Score = 163 bits (412), Expect = 1e-44
Identities = 88/119 (73%), Positives = 90/119 (75%), Gaps = 9/119 (7%)
Frame = -1
Query: 388 NGDAIAALPGSNXXXXXXXXXXXXXXXG---------KLVDTSAPVDQGTESNLLHNFEL 236
NGDA AALPGSN KLVDTSAPVDQGTESN+LHNFEL
Sbjct: 509 NGDASAALPGSNGGGRVSAEAGVAATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFEL 568
Query: 235 PISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 59
PISLA LQKFGGPQGAQAGFMARKQ+IEA GVKVPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 569 PISLAALQKFGGPQGAQAGFMARKQRIEATLGVKVPENDGRRHALTLTVSDYKRRRGLL 627
>gb|PIN01176.1| Paf1/RNA polymerase II complex, RTF1 component (involved in
regulation of TATA box-binding protein) [Handroanthus
impetiginosus]
Length = 625
Score = 157 bits (398), Expect = 1e-42
Identities = 79/82 (96%), Positives = 79/82 (96%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEA G KVPE
Sbjct: 544 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEATIGCKVPE 603
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 604 NDGRRHALTLTVSDYKRRRGLL 625
>gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Erythranthe guttata]
Length = 606
Score = 154 bits (389), Expect = 2e-41
Identities = 84/110 (76%), Positives = 86/110 (78%)
Frame = -1
Query: 388 NGDAIAALPGSNXXXXXXXXXXXXXXXGKLVDTSAPVDQGTESNLLHNFELPISLAVLQK 209
NG AALPG GKLVDT APVDQGTESNLLHNFELPISLAVLQK
Sbjct: 500 NGGGGAALPG---LAATEAALVAAAGAGKLVDTMAPVDQGTESNLLHNFELPISLAVLQK 556
Query: 208 FGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 59
FGGPQG QAGFMARKQ+IEA GVKVPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 557 FGGPQGTQAGFMARKQRIEATLGVKVPENDGRRHALTLSVSDYKRRRGLL 606
>ref|XP_012849060.1| PREDICTED: protein RTF1 homolog [Erythranthe guttata]
Length = 623
Score = 154 bits (389), Expect = 2e-41
Identities = 84/110 (76%), Positives = 86/110 (78%)
Frame = -1
Query: 388 NGDAIAALPGSNXXXXXXXXXXXXXXXGKLVDTSAPVDQGTESNLLHNFELPISLAVLQK 209
NG AALPG GKLVDT APVDQGTESNLLHNFELPISLAVLQK
Sbjct: 517 NGGGGAALPG---LAATEAALVAAAGAGKLVDTMAPVDQGTESNLLHNFELPISLAVLQK 573
Query: 208 FGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 59
FGGPQG QAGFMARKQ+IEA GVKVPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 574 FGGPQGTQAGFMARKQRIEATLGVKVPENDGRRHALTLSVSDYKRRRGLL 623
>ref|XP_023924078.1| protein RTF1 homolog [Quercus suber]
Length = 658
Score = 153 bits (387), Expect = 6e-41
Identities = 76/82 (92%), Positives = 78/82 (95%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDTSAPVDQGTESNLLHNFELPISLA LQ+FGGPQGAQAGFMARKQ+IEA G KVPE
Sbjct: 577 KLVDTSAPVDQGTESNLLHNFELPISLAALQRFGGPQGAQAGFMARKQRIEATIGCKVPE 636
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 637 NDGRRHALTLTVSDYKRRRGLL 658
>ref|XP_015872019.1| PREDICTED: protein RTF1 homolog, partial [Ziziphus jujuba]
Length = 638
Score = 153 bits (386), Expect = 7e-41
Identities = 82/114 (71%), Positives = 87/114 (76%)
Frame = -1
Query: 400 EVVGNGDAIAALPGSNXXXXXXXXXXXXXXXGKLVDTSAPVDQGTESNLLHNFELPISLA 221
EV NG A+A + + GKLVDTSAPVDQGTESNLLHNFELPISL
Sbjct: 531 EVASNGTALAGMVAT------VAALEAAADAGKLVDTSAPVDQGTESNLLHNFELPISLT 584
Query: 220 VLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 59
LQKFGGPQGAQAGFMARKQ+IEA G +VPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 585 TLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRRGLL 638
>ref|XP_022845927.1| protein RTF1 homolog [Olea europaea var. sylvestris]
Length = 632
Score = 151 bits (382), Expect = 3e-40
Identities = 75/82 (91%), Positives = 77/82 (93%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDT APVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQ++EA G KVPE
Sbjct: 551 KLVDTRAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQRMEATVGCKVPE 610
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRH LTLTVSDYKRRRGLL
Sbjct: 611 NDGRRHTLTLTVSDYKRRRGLL 632
>gb|PON96093.1| RNA polymerase-associated protein Rtf [Trema orientalis]
Length = 658
Score = 151 bits (381), Expect = 4e-40
Identities = 75/82 (91%), Positives = 78/82 (95%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDTSAPVDQGT SN+LHNFELPISLAVLQKFGGPQGAQAGFMARKQ+IEA G +VPE
Sbjct: 577 KLVDTSAPVDQGTVSNVLHNFELPISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPE 636
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 637 NDGRRHALTLTVSDYKRRRGLL 658
>gb|PON36800.1| RNA polymerase-associated protein Rtf [Parasponia andersonii]
Length = 658
Score = 151 bits (381), Expect = 4e-40
Identities = 75/82 (91%), Positives = 78/82 (95%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDTSAPVDQGT SN+LHNFELPISLAVLQKFGGPQGAQAGFMARKQ+IEA G +VPE
Sbjct: 577 KLVDTSAPVDQGTVSNVLHNFELPISLAVLQKFGGPQGAQAGFMARKQRIEATVGCRVPE 636
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 637 NDGRRHALTLTVSDYKRRRGLL 658
>ref|XP_022136687.1| protein RTF1 homolog [Momordica charantia]
Length = 664
Score = 150 bits (378), Expect = 1e-39
Identities = 75/82 (91%), Positives = 78/82 (95%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDTSAPVD GTESNLLHNFELPISLAVLQKFGGPQGAQAGF+ARKQ+IEA G +VPE
Sbjct: 583 KLVDTSAPVDGGTESNLLHNFELPISLAVLQKFGGPQGAQAGFLARKQRIEATVGRQVPE 642
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 643 NDGRRHALTLTVSDYKRRRGLL 664
>gb|KZV47798.1| hypothetical protein F511_41277 [Dorcoceras hygrometricum]
Length = 621
Score = 147 bits (371), Expect = 8e-39
Identities = 73/82 (89%), Positives = 76/82 (92%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDT+APVDQGTESN+LHNFEL ISL+VLQKFGGPQGAQ GFMARKQ IEA G KVPE
Sbjct: 540 KLVDTNAPVDQGTESNMLHNFELDISLSVLQKFGGPQGAQGGFMARKQWIEATVGCKVPE 599
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 600 NDGRRHALTLTVSDYKRRRGLL 621
>ref|XP_022941904.1| protein RTF1 homolog [Cucurbita moschata]
ref|XP_022941905.1| protein RTF1 homolog [Cucurbita moschata]
Length = 658
Score = 147 bits (371), Expect = 1e-38
Identities = 74/82 (90%), Positives = 76/82 (92%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDTSAPVD GTESN LHNFELPISLAVLQKFGGP GAQAGF+ARKQQIEA G +VPE
Sbjct: 577 KLVDTSAPVDGGTESNSLHNFELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPE 636
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 637 NDGRRHALTLTVSDYKRRRGLL 658
>ref|XP_003529309.1| PREDICTED: protein RTF1 homolog [Glycine max]
ref|XP_014633601.1| PREDICTED: protein RTF1 homolog [Glycine max]
gb|KRH50003.1| hypothetical protein GLYMA_07G194200 [Glycine max]
Length = 656
Score = 147 bits (370), Expect = 1e-38
Identities = 73/82 (89%), Positives = 77/82 (93%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDTSAPVDQGTESN+LHNFELPISLA+LQKFGG QGAQAGFMARKQ+IEA G +V E
Sbjct: 575 KLVDTSAPVDQGTESNMLHNFELPISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSE 634
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 635 NDGRRHALTLTVSDYKRRRGLL 656
>gb|PPS04900.1| hypothetical protein GOBAR_AA15766 [Gossypium barbadense]
Length = 229
Score = 139 bits (349), Expect = 2e-38
Identities = 68/82 (82%), Positives = 76/82 (92%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDT+APVD+GTESN+LH+FELPISL VL+KFGG +GA AGFMARKQ+IEA G +VPE
Sbjct: 148 KLVDTNAPVDEGTESNMLHDFELPISLDVLRKFGGHEGAVAGFMARKQRIEATVGCRVPE 207
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 208 NDGRRHALTLTVSDYKRRRGLL 229
>ref|XP_008228301.1| PREDICTED: LOW QUALITY PROTEIN: protein RTF1 homolog [Prunus mume]
Length = 648
Score = 146 bits (368), Expect = 3e-38
Identities = 71/82 (86%), Positives = 76/82 (92%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KL+DTSAPVD GTESNL+HNFELPISLA LQKFGGPQGAQ GF+ARKQ+IEA G +VPE
Sbjct: 567 KLIDTSAPVDFGTESNLMHNFELPISLATLQKFGGPQGAQEGFLARKQRIEATVGCRVPE 626
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 627 NDGRRHALTLTVSDYKRRRGLL 648
>ref|XP_023534918.1| protein RTF1 homolog [Cucurbita pepo subsp. pepo]
ref|XP_023534927.1| protein RTF1 homolog [Cucurbita pepo subsp. pepo]
Length = 658
Score = 146 bits (368), Expect = 3e-38
Identities = 73/82 (89%), Positives = 76/82 (92%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDT+APVD GTESN LHNFELPISLAVLQKFGGP GAQAGF+ARKQQIEA G +VPE
Sbjct: 577 KLVDTNAPVDGGTESNSLHNFELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPE 636
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 637 NDGRRHALTLTVSDYKRRRGLL 658
>ref|XP_023522521.1| protein RTF1 homolog isoform X2 [Cucurbita pepo subsp. pepo]
Length = 658
Score = 146 bits (368), Expect = 3e-38
Identities = 73/82 (89%), Positives = 76/82 (92%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDT+APVD GTESN LHNFELPISLAVLQKFGGP GAQAGF+ARKQQIEA G +VPE
Sbjct: 577 KLVDTNAPVDGGTESNSLHNFELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPE 636
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 637 NDGRRHALTLTVSDYKRRRGLL 658
>ref|XP_022979530.1| protein RTF1 homolog [Cucurbita maxima]
ref|XP_022979538.1| protein RTF1 homolog [Cucurbita maxima]
Length = 658
Score = 146 bits (368), Expect = 3e-38
Identities = 73/82 (89%), Positives = 76/82 (92%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDT+APVD GTESN LHNFELPISLAVLQKFGGP GAQAGF+ARKQQIEA G +VPE
Sbjct: 577 KLVDTNAPVDGGTESNSLHNFELPISLAVLQKFGGPMGAQAGFLARKQQIEATVGRQVPE 636
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTLTVSDYKRRRGLL
Sbjct: 637 NDGRRHALTLTVSDYKRRRGLL 658
>ref|XP_010100559.1| protein RTF1 homolog [Morus notabilis]
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus
notabilis]
Length = 658
Score = 146 bits (368), Expect = 3e-38
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = -1
Query: 304 KLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPE 125
KLVDT+APVDQGT SN+LHNFELPISL+VLQKFGGPQGAQAGFMARKQ+IEA G +VPE
Sbjct: 577 KLVDTNAPVDQGTVSNMLHNFELPISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPE 636
Query: 124 NDGRRHALTLTVSDYKRRRGLL 59
NDGRRHALTL+V DYKRRRGLL
Sbjct: 637 NDGRRHALTLSVGDYKRRRGLL 658