BLASTX nr result

ID: Rehmannia31_contig00017425 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00017425
         (314 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011076219.1| threonine--tRNA ligase, mitochondrial 1 [Ses...    60   2e-08
gb|PIN04535.1| Threonyl-tRNA synthetase [Handroanthus impetigino...    55   1e-06

>ref|XP_011076219.1| threonine--tRNA ligase, mitochondrial 1 [Sesamum indicum]
          Length = 722

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +3

Query: 189 SISRRLFFPMGDSVAASKAKPNLNSFSPVHTKDEAYLQTVI 311
           S+ RR FFPMGDS A +KAKPN NS  P ++KDEAYLQ+VI
Sbjct: 22  SLCRRFFFPMGDSPAGAKAKPNSNSAPPAYSKDEAYLQSVI 62


>gb|PIN04535.1| Threonyl-tRNA synthetase [Handroanthus impetiginosus]
          Length = 721

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = +3

Query: 189 SISRRLFFPMGDSVAASKAKPNLNSFSPVHTKDEAYLQTVIP 314
           S+ RR  FPMGDS A+SKAKPN NS +    KDEAYLQTV+P
Sbjct: 22  SVCRRFCFPMGDSAASSKAKPNSNS-ALAFVKDEAYLQTVVP 62


Top