BLASTX nr result
ID: Rehmannia31_contig00016703
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia31_contig00016703 (2754 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CDP17738.1| unnamed protein product [Coffea canephora] 1120 0.0 emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 1063 0.0 gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 824 0.0 gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 659 0.0 gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 649 0.0 emb|CDP17739.1| unnamed protein product [Coffea canephora] 600 0.0 gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 649 0.0 gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 590 0.0 gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro... 596 0.0 gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] 580 0.0 gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 585 0.0 gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus] 582 0.0 gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 581 0.0 gb|PNX96445.1| copia LTR rider [Trifolium pratense] 582 0.0 gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 581 0.0 gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 594 0.0 gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposo... 557 0.0 gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 571 0.0 dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] 578 0.0 emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 566 0.0 >emb|CDP17738.1| unnamed protein product [Coffea canephora] Length = 798 Score = 1120 bits (2897), Expect = 0.0 Identities = 551/775 (71%), Positives = 637/775 (82%), Gaps = 6/775 (0%) Frame = -3 Query: 2464 RMLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRLA 2285 R+ + +++++VETFDGTGHFGMWQGEV+D LFQQGLDIAI TINRLA Sbjct: 27 RIPMSSLKVAVETFDGTGHFGMWQGEVMDSLFQQGLDIAIEEKKSDDIEEKEWSTINRLA 86 Query: 2284 CGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMN 2105 CGTIRSCLS+EQKYAFKNE SA+KLWKALE KFLKKSGQNKLLMKK LFRF+Y+ GTTMN Sbjct: 87 CGTIRSCLSKEQKYAFKNETSAWKLWKALEGKFLKKSGQNKLLMKKILFRFDYQPGTTMN 146 Query: 2104 DHITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCAAL 1925 +HIT FNQLVADLLNLDV F DEDLALMLLSSLPDEFEHLETTLLHGK++VSL VC+AL Sbjct: 147 EHITIFNQLVADLLNLDVNFEDEDLALMLLSSLPDEFEHLETTLLHGKENVSLDAVCSAL 206 Query: 1924 YSYELXXXXXXXXXNIAADDEALVAXXXXXXXXXXXXXXXXXKAKLDKDECAFCHEKGHW 1745 YS EL +AA DEALVA +++ KDECAFC EKGHW Sbjct: 207 YSRELRKQDKKKKK-VAAADEALVARGRQQSQSKGRRGWSKSISRVAKDECAFCREKGHW 265 Query: 1744 KKDCPKLKNKGKAPQDACVAE--GESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEW 1571 KKDCPKLK KGKAPQD VAE ++E +FSL VS L S DEWILDS CTYHM+P++EW Sbjct: 266 KKDCPKLKKKGKAPQDVNVAECKSDAESDFSLAVSRLTSHPDEWILDSTCTYHMTPMREW 325 Query: 1570 FFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALE 1391 FF FEE++GG VYMGNDN CKT GIGSI+L+NHDGSTR+L DVRYVPNLK++LISLG LE Sbjct: 326 FFEFEELDGGFVYMGNDNPCKTVGIGSIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLE 385 Query: 1390 SKGLIVTLRDGVLKATSGSLVVIKGIRRNNLYYYQGNTVIGTAAVA-DSRNEKESEAAKL 1214 SKGL V +RDG+LK TSG+L+++KG+R+NNLYYYQG+TV+GTAAVA S ++K++EA KL Sbjct: 386 SKGLEVRMRDGILKVTSGALLMLKGVRKNNLYYYQGSTVVGTAAVATSSSSKKDAEATKL 445 Query: 1213 WHMRLGHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYV 1034 WHMRLG AGEKSLQ LAKQGLLK KVCKL+FCEHCVL KQ++VKFGT IHNT+GILDYV Sbjct: 446 WHMRLGDAGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYV 505 Query: 1033 HSDVWGPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKI 854 HSDVWGP+KTPSLGG++YFVTFIDDFSRRVWV+TMK+KDE+L IFLKWK R+ENQTGRKI Sbjct: 506 HSDVWGPAKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEMLKIFLKWKARVENQTGRKI 565 Query: 853 KVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAG 674 K+LRTDNGGEY SDPFQ++C + GIVRHF VR+ PQQNGV+E MN+TLVEKVRCMLSNAG Sbjct: 566 KILRTDNGGEYKSDPFQKICQECGIVRHFIVRKIPQQNGVSEHMNKTLVEKVRCMLSNAG 625 Query: 673 LGRQHWAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVYYHVKESK 494 LGR+ WAEAVTYAQHL+NRLPSSAIGGKTPLEVWSGK TDYDSLR+F S YYHV ESK Sbjct: 626 LGRKFWAEAVTYAQHLVNRLPSSAIGGKTPLEVWSGKLATDYDSLRIFDSTAYYHVNESK 685 Query: 493 LEPRAKRALFMGITSGVKGYRLWCLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVE 314 L+PRAK+ALFMG ++GVKGYRLW LE+KK + SRDVTFDE ML +T + T QQVE Sbjct: 686 LDPRAKKALFMGFSAGVKGYRLWYLEAKKTIISRDVTFDESVMLNKITQDGTSGTPQQVE 745 Query: 313 RTPKQVEVEEMAIIPAK---NDNPVTEDLSDDDEEEVQTQKPLDQSEPIAVRRPR 158 TPKQVE E++ + PA +D+P+ E+ + DEEEV TQ+P Q + IAV R R Sbjct: 746 CTPKQVEFEQIVVSPANSTISDSPMAEE--ESDEEEVSTQEPQQQQKSIAVNRAR 798 >emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris] Length = 813 Score = 1063 bits (2750), Expect = 0.0 Identities = 537/806 (66%), Positives = 611/806 (75%), Gaps = 6/806 (0%) Frame = -3 Query: 2401 MWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRLACGTIRSCLSREQKYAFKNENS 2222 MWQGEVLD LFQQGLD AI INRLACGTIRSCLSREQKYA KNE S Sbjct: 1 MWQGEVLDSLFQQGLDFAIEGEKPKEVEEKDWSIINRLACGTIRSCLSREQKYAVKNETS 60 Query: 2221 AYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFS 2042 A+KLWKALEDKFLKKS V F Sbjct: 61 AHKLWKALEDKFLKKS----------------------------------------VKFE 80 Query: 2041 DEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDE 1862 DEDLALMLLSSLPDEFEHLETTLLHGK++VSL VC+ALYS+EL + +++ Sbjct: 81 DEDLALMLLSSLPDEFEHLETTLLHGKENVSLDAVCSALYSHELRKQDKMRTKSTTSEEA 140 Query: 1861 ALVAXXXXXXXXXXXXXXXXXKAKLDKDECAFCHEKGHWKKDCPKLKNKGKAPQDACVAE 1682 ++ + KDECAFCHEKGHWKKDCPKL+ K K PQDA VAE Sbjct: 141 LVIRGRQQSQTKERRGMSKSKGRVVAKDECAFCHEKGHWKKDCPKLQKKEKVPQDANVAE 200 Query: 1681 GES--EDEFSLVVS-PLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNAC 1511 +S E + SL+VS S DEWILDSGCTYHM P+++WFF F+E++GGVVYMGNDN C Sbjct: 201 CKSDVESDISLIVSLSASSYPDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPC 260 Query: 1510 KTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSL 1331 KT GIGSI+L+NHDGSTR+L DVRYVP LKKNLISLGALESKGL+VT+RDG+LKAT G+L Sbjct: 261 KTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKATLGAL 320 Query: 1330 VVIKGIRRNNLYYYQGNTVIGTAAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGL 1151 V++KG+ +NNLYYYQG+TV+GT A A S ++K++EAAKLWHMRLGHAGEKSLQ L KQGL Sbjct: 321 VMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEAAKLWHMRLGHAGEKSLQILTKQGL 380 Query: 1150 LKDVKVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVT 971 LK K CKL+FCEHCVLGKQ+RVKFGTAIHNT+GILDYVHSDVWGP+KTPS+GG+HYFVT Sbjct: 381 LKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIGGRHYFVT 440 Query: 970 FIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEYTSDPFQEVCH 791 F+DDFSRRVWV+TMK K++VL IFLKWK +EN TGRKIKVL+TDNGGEY SDPF VC Sbjct: 441 FVDDFSRRVWVFTMKNKNDVLEIFLKWKAEVENHTGRKIKVLQTDNGGEYKSDPFLNVCQ 500 Query: 790 KYGIVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLP 611 GIVRHFTVR+TPQQNGV+ERMN+TLVEKV CMLSNA LGR+ WAEAVTYAQHL+NRLP Sbjct: 501 DCGIVRHFTVRKTPQQNGVSERMNKTLVEKVCCMLSNAELGREFWAEAVTYAQHLVNRLP 560 Query: 610 SSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVYYHVKESKLEPRAKRALFMGITSGVKGYR 431 SSAI GKTPLEVWSGKP TDYDSL VFGS+ YYHV ESKL+PRAK+ALFMG + GVKGYR Sbjct: 561 SSAIDGKTPLEVWSGKPATDYDSLHVFGSIAYYHVIESKLDPRAKKALFMGFSPGVKGYR 620 Query: 430 LWCLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQVEVEEMAIIPAKN--- 260 LWCLE KK + SRDVTFDE MLK V E TDS QQVE KQVE E +IP +N Sbjct: 621 LWCLEKKKTIISRDVTFDESVMLKKVNPEGTDSTPQQVECVRKQVEFEPTVVIPTRNTTS 680 Query: 259 DNPVTEDLSDDDEEEVQTQKPLDQSEPIAVRRPRREIHKPARFADMVAYALPVIDDDVPF 80 D+P+ E+ + DEEEV TQ+ QS PIAVRR RR+I KPARF DMVAYALPV+ DD+P Sbjct: 681 DSPMAEE--ESDEEEVPTQESQQQSAPIAVRRQRRDIQKPARFMDMVAYALPVV-DDIPS 737 Query: 79 TFREAVRSPESEKWKGAMEEEMQSLQ 2 T+ + S ES W GAMEEEMQSL+ Sbjct: 738 TYPGVILSSESGNWAGAMEEEMQSLK 763 >gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 1032 Score = 824 bits (2128), Expect = 0.0 Identities = 405/601 (67%), Positives = 469/601 (78%), Gaps = 3/601 (0%) Frame = -3 Query: 1795 AKLDKDECAFCHEKGHWKKDCPKLKNKG--KAPQDACVAEGESEDEFSLVVSPLISRSDE 1622 AK+ KDECAFC EKGHWKKDCPKLKNKG K D+ VAE + + SL VS S S Sbjct: 13 AKVGKDECAFCREKGHWKKDCPKLKNKGQSKTVADSNVAEYVDDSDCSLAVSGSTSSSSA 72 Query: 1621 WILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDV 1442 W+LDSGC+ HM P +EWF++F E+ GVVY ND T GIGSIRLKN DG+ R L DV Sbjct: 73 WLLDSGCSNHMCPNREWFYDFRELEEGVVYTANDVPLTTHGIGSIRLKNRDGAIRTLKDV 132 Query: 1441 RYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVIKGIRRNN-LYYYQGNTVIGT 1265 R+VP+L +NLIS+GALE KG V GV+K SG+LVV+KG+R+NN LYYYQG T+IGT Sbjct: 133 RFVPSLSRNLISVGALEEKGFTVHAEGGVMKIISGALVVMKGVRKNNRLYYYQGTTIIGT 192 Query: 1264 AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKR 1085 AAVA S +EKE E+AKLWHMRLGHAGE+SL L KQGLLK+++ CKLDFCEHCV GK+ R Sbjct: 193 AAVASS-DEKELESAKLWHMRLGHAGERSLNLLMKQGLLKNIQACKLDFCEHCVKGKKTR 251 Query: 1084 VKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLG 905 VKFGTAIH+T+GILDYVHSDVWGPSKT SL G HY+VTF+DDFSRR+WVY MKTKDEVLG Sbjct: 252 VKFGTAIHDTKGILDYVHSDVWGPSKTASLAGNHYYVTFVDDFSRRIWVYAMKTKDEVLG 311 Query: 904 IFLKWKTRIENQTGRKIKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAER 725 IFLKWK R+E QTGRKIK RTDNGGEYTSDPF++ C + GIVRHFTV+ TPQQNGVAER Sbjct: 312 IFLKWKKRMETQTGRKIKHFRTDNGGEYTSDPFKKACEESGIVRHFTVKHTPQQNGVAER 371 Query: 724 MNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYD 545 MNRTL+EKVRCMLSNAGLG+Q WAEAV YA HLINRLPSSAIGGKTPLE W GKP TDYD Sbjct: 372 MNRTLLEKVRCMLSNAGLGKQFWAEAVVYASHLINRLPSSAIGGKTPLEKWFGKPATDYD 431 Query: 544 SLRVFGSLVYYHVKESKLEPRAKRALFMGITSGVKGYRLWCLESKKILFSRDVTFDEHAM 365 SL VFG YYHVKESKL+PRAK+A+FMGI SGVKGYRLWCLE+KK + SRDVTFDE M Sbjct: 432 SLHVFGCTAYYHVKESKLDPRAKKAIFMGIASGVKGYRLWCLETKKTIISRDVTFDESTM 491 Query: 364 LKTVTSEKTDSALQQVERTPKQVEVEEMAIIPAKNDNPVTEDLSDDDEEEVQTQKPLDQS 185 L VT+E Q+ TPKQVE E + PA ++ + DEEEV Q+P Q Sbjct: 492 LGKVTTE------QKKNGTPKQVEFERKIVFPANDEEKTPMVDEESDEEEVHIQEPPQQL 545 Query: 184 EPIAVRRPRREIHKPARFADMVAYALPVIDDDVPFTFREAVRSPESEKWKGAMEEEMQSL 5 E IA+R+P+R PAR+ DMV+YA PV DD+P T+ EAV+ E +KW+ AM EEM+SL Sbjct: 546 ESIALRKPKRTTIMPARYVDMVSYASPVASDDIPTTYIEAVKGSEEDKWRSAMSEEMESL 605 Query: 4 Q 2 + Sbjct: 606 R 606 >gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gb|ABO36636.1| copia LTR rider [Solanum lycopersicum] Length = 1307 Score = 659 bits (1699), Expect = 0.0 Identities = 367/825 (44%), Positives = 490/825 (59%), Gaps = 11/825 (1%) Frame = -3 Query: 2446 IRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRLACGTIRS 2267 + + ++ F G F +WQ ++ L QQG A + A TI Sbjct: 4 LNVKIDKFTGRNSFSLWQIKMRALLKQQGF-WAPLSKDKNAVVTPEMAILEEKAHSTIML 62 Query: 2266 CLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAF 2087 CL+ + +E +A LW LE ++ KS NKLL+K+RLF GT + +H+ Sbjct: 63 CLADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRLFGLRMAEGTQLREHLEQL 122 Query: 2086 NQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELX 1907 N L+ +L N+DV DED AL+LL SLP FE+ + + GKD VSL V +AL+S EL Sbjct: 123 NTLLLELRNIDVKIEDEDAALILLVSLPMSFENFVQSFIVGKDTVSLEEVRSALHSRELR 182 Query: 1906 XXXXXXXXNIAADDEALVAXXXXXXXXXXXXXXXXXKAKLDKDECAFCHEKGHWKKDCPK 1727 +I + AK D D C +C EKGHWK DCPK Sbjct: 183 HKANGTSTDIQPSG-LFTSSRKGRKNGGKKNKPMSKGAKPD-DVCNYCKEKGHWKFDCPK 240 Query: 1726 LKNKG-KAPQDACVAEGE--SEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFE 1556 K + K A VAE + SE++ +LV SD W+LDSG +YH+ P +EWF +E Sbjct: 241 KKKQSEKQSVSAAVAEEDTNSEEDIALVADEHTHHSDVWVLDSGASYHICPRREWFTTYE 300 Query: 1555 EINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLI 1376 +++GG + M N + CK G GSI+++ HDGS L +VR+VP + KNLISL L+SKG Sbjct: 301 QVDGGSISMANSSVCKVVGTGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDSKGFS 360 Query: 1375 VTLRDGVLKATSGSLVVIKGIRRNNLYYYQGNTVIGTAAVADSRNEKESEAAKLWHMRLG 1196 + +DGVL+ GS +++KG+ R LY+ QG+TV G+A VA S ++ + KLWH+RLG Sbjct: 361 WSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVASSEFHQK-DMTKLWHIRLG 419 Query: 1195 HAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWG 1016 H GE+ +Q L+K+ LL KV L+FCEHCV GK R KF AIH T+G LDY+HSD WG Sbjct: 420 HMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWG 479 Query: 1015 PSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTD 836 P + SLGG +FV+ IDD+SR WVY MK K E F +WK +ENQTG+KIK LRTD Sbjct: 480 PCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTD 539 Query: 835 NGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHW 656 NG E+ F + C GI RH TVR TPQQNGVAERMN+TL+E+ RCMLSNAGL R+ W Sbjct: 540 NGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFW 599 Query: 655 AEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVYYHVKESKLEPRAK 476 AEAV+ A +LINR P + I KTP+E+WSGK DY +L+ FG YYHV E KLEPRAK Sbjct: 600 AEAVSTACYLINRGPHTGIQCKTPMEMWSGK-AADYSNLKAFGCTAYYHVSEGKLEPRAK 658 Query: 475 RALFMGITSGVKGYRLWCLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQV 296 + +F+G GVKG+R+W K+++ SR+V FDE +L+T+ T S ++ KQV Sbjct: 659 KGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTSETGSLD---KQV 715 Query: 295 EVEEMAIIPAKND--NPVTEDLSDDDEEEVQTQKPLDQSEPIAVRRPRR-EIHKPAR--F 131 E + +I ++D P ED E ++ P D + IA RPRR + P R F Sbjct: 716 EFQ---VIQNESDLKEPEEEDQEPQTETDIPESMPSDIHQSIAQDRPRRVGVRPPTRYGF 772 Query: 130 ADMVAYALPV---IDDDVPFTFREAVRSPESEKWKGAMEEEMQSL 5 DMV YAL V +D P T++EA+ S +SEKW AM +EM+SL Sbjct: 773 EDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESL 817 >gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense] Length = 1841 Score = 649 bits (1673), Expect = 0.0 Identities = 369/832 (44%), Positives = 501/832 (60%), Gaps = 15/832 (1%) Frame = -3 Query: 2455 VPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRL--AC 2282 V + + VE F G F +W+ ++ L QQGL A+ + + L A Sbjct: 525 VSSTKYDVEKFTGKNSFSLWRIKMRAVLVQQGLLKALSGKDKLPSTLSEEQKDDMLERAH 584 Query: 2281 GTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMND 2102 I CL E +E +A LW LE K++ KS N+L +K+RL+ + GT ++ Sbjct: 585 SAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGTPVSQ 644 Query: 2101 HITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCAALY 1922 H+ FN ++ DL N+D DED A+++L SLP +E+ T+++G+DD++L V AL Sbjct: 645 HLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYGRDDLTLEEVKNALS 704 Query: 1921 SYELXXXXXXXXXNIAADDEALVAXXXXXXXXXXXXXXXXXKAKLDKDECAFCHEKGHWK 1742 S EL + E LVA + +C +C + GH K Sbjct: 705 SSELRKKITGKVVE-NNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYYCKKYGHMK 763 Query: 1741 KDCPKLKNKGKAPQD----ACVAEGESEDEFSLVVSPLISRSD-EWILDSGCTYHMSPVK 1577 DCPK K K ++ + A VA+ +S + +V++ S + WILD+G T+H+S K Sbjct: 764 VDCPKRKEKSESQEQQNDRANVADADSSSDAEIVLAVSDSYAGGRWILDTGATFHISTSK 823 Query: 1576 EWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGA 1397 + F +E+ +G V+ MGND+AC+ GIG++R+K DG R LTDVR++P +KKNLISL Sbjct: 824 DAFSTYEKHSGSVL-MGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLST 882 Query: 1396 LESKGLIVTLRDGVLKATSGSLVVIKGIRRNNLYYYQGNTVIGTAAVADSRNEKESEAAK 1217 L+ KG + GVLK SG+L VI+G LY+ G++V G A V+ S ++ +S+ K Sbjct: 883 LDKKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSS-DDLDSDTTK 941 Query: 1216 LWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDY 1037 LWHMRLGH E+ L L+K+GLL KL+FCEHCV GKQ RVKF T IH T+G +DY Sbjct: 942 LWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTVDY 1001 Query: 1036 VHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRK 857 HSD+WGPS T S GG Y +TFIDD+SR+VWVY +K+K EVL F ++K IENQTG+K Sbjct: 1002 FHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQTGKK 1061 Query: 856 IKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNA 677 IK RTDNG E+ S F E C GIVRH TVRRTPQQNGVAERMNRTL+E+ RCM SNA Sbjct: 1062 IKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERMNRTLLERARCMRSNA 1121 Query: 676 GLGRQHWAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVYYHVKES 497 GLG + WAEAV A +L+NR PS+AI KTP EVWSG P DY LRVFG Y HV E Sbjct: 1122 GLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSP-ADYSGLRVFGCPAYAHVNEG 1180 Query: 496 KLEPRAKRALFMGITSGVKGYRLWCLE--SKKILFSRDVTFDEHAMLKTVTS--EKTDSA 329 KL+PRAK+ +F+G GVKGYRLWC + S K + SRDVTFDE +ML++ T+ EK +S Sbjct: 1181 KLKPRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSMLRSTTNSREKEESD 1240 Query: 328 LQQVERTPKQVEVEEMAIIPAKNDNPVTE--DLSDDDEEEVQTQKPLDQSEPIAVRRPRR 155 KQVE + A IP + + + ++ D DE+E +KP IA R +R Sbjct: 1241 RMGDHGVEKQVECQVDAPIPTEGTSVQDDQVEVQDSDEDESPQEKPYS----IATGRTKR 1296 Query: 154 EIHKPARFADMVAYALPVIDD--DVPFTFREAVRSPESEKWKGAMEEEMQSL 5 +I R+A++V++AL V + P ++ EAV ES +W AM EE++SL Sbjct: 1297 QIKPNPRYANLVSFALSVAESIGIEPSSYNEAVTCDESAQWAIAMSEEIESL 1348 >emb|CDP17739.1| unnamed protein product [Coffea canephora] Length = 435 Score = 600 bits (1547), Expect = 0.0 Identities = 286/393 (72%), Positives = 338/393 (86%), Gaps = 4/393 (1%) Frame = -3 Query: 1369 LRDGVLKATSGSLVVIKGIRRNNLYYYQGNTVIGTAAVA-DSRNEKESEAAKLWHMRLGH 1193 +RDG+LK TSG+LV++KG+R+N LYYYQG+ V+GTAA S ++K++EA KLWHMRLGH Sbjct: 1 MRDGILKVTSGALVMLKGVRKNILYYYQGSIVVGTAAATTSSSSKKDAEATKLWHMRLGH 60 Query: 1192 AGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGP 1013 AGEKSLQ LAKQGLLK KVCKL+FCEHCVL KQ++VKFGT IHNT+GILDYVHS+VWGP Sbjct: 61 AGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSNVWGP 120 Query: 1012 SKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDN 833 +KTPSLGG++YFVTFIDDFSRRVWV+TMK+KDEVL IFLKWK R+ENQTGRKIK+LRTDN Sbjct: 121 AKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEVLEIFLKWKARVENQTGRKIKILRTDN 180 Query: 832 GGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWA 653 GGEY SDPFQ++ + GIV+HFTVR+TPQQNGV+ERMN+TLVEKV CMLSNA LGR+ WA Sbjct: 181 GGEYKSDPFQKIGQECGIVQHFTVRKTPQQNGVSERMNKTLVEKVHCMLSNARLGRKFWA 240 Query: 652 EAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVYYHVKESKLEPRAKR 473 E VTYAQHL+NRLPSSAIGGKTPLEVWSGKP TDYDSLR+F S YYHV ESKL+PRAK+ Sbjct: 241 ETVTYAQHLVNRLPSSAIGGKTPLEVWSGKPTTDYDSLRIFYSTAYYHVNESKLDPRAKK 300 Query: 472 ALFMGITSGVKGYRLWCLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQVE 293 A+FMG+ +GVKGYRLWCLE+KK + SRDVTF+E AML VT T QQVE TPKQVE Sbjct: 301 AIFMGLNAGVKGYRLWCLEAKKTIISRDVTFNESAMLNKVTQNGTSGTPQQVECTPKQVE 360 Query: 292 VEEMAIIPAK---NDNPVTEDLSDDDEEEVQTQ 203 E++ + PA +D+P+ E+ + DEEE+ TQ Sbjct: 361 FEQIVVSPANSTISDSPMAEE--ESDEEEISTQ 391 >gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense] Length = 2351 Score = 649 bits (1673), Expect = 0.0 Identities = 369/832 (44%), Positives = 501/832 (60%), Gaps = 15/832 (1%) Frame = -3 Query: 2455 VPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRL--AC 2282 V + + VE F G F +W+ ++ L QQGL A+ + + L A Sbjct: 504 VSSTKYDVEKFTGKNSFSLWRIKMRAVLVQQGLLKALSGKDKLPSTLSEEQKDDMLERAH 563 Query: 2281 GTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMND 2102 I CL E +E +A LW LE K++ KS N+L +K+RL+ + GT ++ Sbjct: 564 SAILLCLGDEVLREVADEKTASGLWLRLESKYMTKSLTNRLYLKQRLYALKMEEGTPVSQ 623 Query: 2101 HITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCAALY 1922 H+ FN ++ DL N+D DED A+++L SLP +E+ T+++G+DD++L V AL Sbjct: 624 HLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLPPSYENFVDTMMYGRDDLTLEEVKNALS 683 Query: 1921 SYELXXXXXXXXXNIAADDEALVAXXXXXXXXXXXXXXXXXKAKLDKDECAFCHEKGHWK 1742 S EL + E LVA + +C +C + GH K Sbjct: 684 SSELRKKITGKVVE-NNEGEGLVARGRSKAKGGSSSKSHPRSQSKKRIQCYYCKKYGHMK 742 Query: 1741 KDCPKLKNKGKAPQD----ACVAEGESEDEFSLVVSPLISRSD-EWILDSGCTYHMSPVK 1577 DCPK K K ++ + A VA+ +S + +V++ S + WILD+G T+H+S K Sbjct: 743 VDCPKRKEKSESQEQQNDRANVADADSSSDAEIVLAVSDSYAGGRWILDTGATFHISTSK 802 Query: 1576 EWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGA 1397 + F +E+ +G V+ MGND+AC+ GIG++R+K DG R LTDVR++P +KKNLISL Sbjct: 803 DAFSTYEKHSGSVL-MGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLST 861 Query: 1396 LESKGLIVTLRDGVLKATSGSLVVIKGIRRNNLYYYQGNTVIGTAAVADSRNEKESEAAK 1217 L+ KG + GVLK SG+L VI+G LY+ G++V G A V+ S ++ +S+ K Sbjct: 862 LDKKGFRYSAEGGVLKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSS-DDLDSDTTK 920 Query: 1216 LWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDY 1037 LWHMRLGH E+ L L+K+GLL KL+FCEHCV GKQ RVKF T IH T+G +DY Sbjct: 921 LWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTVDY 980 Query: 1036 VHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRK 857 HSD+WGPS T S GG Y +TFIDD+SR+VWVY +K+K EVL F ++K IENQTG+K Sbjct: 981 FHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQTGKK 1040 Query: 856 IKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNA 677 IK RTDNG E+ S F E C GIVRH TVRRTPQQNGVAERMNRTL+E+ RCM SNA Sbjct: 1041 IKRFRTDNGLEFCSGEFNEFCKNEGIVRHRTVRRTPQQNGVAERMNRTLLERARCMRSNA 1100 Query: 676 GLGRQHWAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVYYHVKES 497 GLG + WAEAV A +L+NR PS+AI KTP EVWSG P DY LRVFG Y HV E Sbjct: 1101 GLGEEFWAEAVNTACYLVNRSPSTAIELKTPEEVWSGSP-ADYSGLRVFGCPAYAHVNEG 1159 Query: 496 KLEPRAKRALFMGITSGVKGYRLWCLE--SKKILFSRDVTFDEHAMLKTVTS--EKTDSA 329 KL+PRAK+ +F+G GVKGYRLWC + S K + SRDVTFDE +ML++ T+ EK +S Sbjct: 1160 KLKPRAKKCIFLGYGQGVKGYRLWCPDPVSSKFIISRDVTFDESSMLRSTTNSREKEESD 1219 Query: 328 LQQVERTPKQVEVEEMAIIPAKNDNPVTE--DLSDDDEEEVQTQKPLDQSEPIAVRRPRR 155 KQVE + A IP + + + ++ D DE+E +KP IA R +R Sbjct: 1220 RMGDHGVEKQVECQVDAPIPTEGTSVQDDQVEVQDSDEDESPQEKPYS----IATGRTKR 1275 Query: 154 EIHKPARFADMVAYALPVIDD--DVPFTFREAVRSPESEKWKGAMEEEMQSL 5 +I R+A++V++AL V + P ++ EAV ES +W AM EE++SL Sbjct: 1276 QIKPNPRYANLVSFALSVAESIGIEPSSYNEAVTCDESAQWAIAMSEEIESL 1327 >gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris] Length = 867 Score = 590 bits (1522), Expect = 0.0 Identities = 306/474 (64%), Positives = 348/474 (73%), Gaps = 4/474 (0%) Frame = -3 Query: 2401 MWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRLACGTIRSCLSREQKYAFKNENS 2222 MWQGEVLD LFQQGLDIAI INRLACGTIRSCLSREQKYA KNE S Sbjct: 1 MWQGEVLDSLFQQGLDIAIEGEKPKEVEEKDWSIINRLACGTIRSCLSREQKYAVKNETS 60 Query: 2221 AYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFS 2042 A+KLWKALEDKFLKKS DV F Sbjct: 61 AHKLWKALEDKFLKKS---------------------------------------DVKFE 81 Query: 2041 DEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDE 1862 DEDLALMLLSSLPDEFEHLETTLLHGK++VSL VVC+ALYS+EL + ++ E Sbjct: 82 DEDLALMLLSSLPDEFEHLETTLLHGKENVSLDVVCSALYSHELRKQDKMKTKSTTSE-E 140 Query: 1861 ALVAXXXXXXXXXXXXXXXXXKAK-LDKDECAFCHEKGHWKKDCPKLKNKGKAPQDACVA 1685 ALVA K + + KDECAFCHEKGHWKKDCPKL+ K K QDA VA Sbjct: 141 ALVARGRQQSQTKERRGMSKSKGRAVAKDECAFCHEKGHWKKDCPKLQKKEKVLQDANVA 200 Query: 1684 EGES--EDEFSLVVSPLISRS-DEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNA 1514 E +S E + SL+VS S DEWILDSGCTYHM P+++WFF F+E++GGVVYMGNDN Sbjct: 201 ECKSDVESDISLIVSLSASLYLDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNP 260 Query: 1513 CKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGS 1334 CKT GIGSI+L+NHDGSTR+L DVRYVP LKKNLISLGALESKGL+VT+RDG+LKATSG+ Sbjct: 261 CKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKATSGA 320 Query: 1333 LVVIKGIRRNNLYYYQGNTVIGTAAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQG 1154 LV++KG+ +NNLYYYQG+TV+GT A A S ++K++EA KLWHMRLGHAGEKSLQ KQG Sbjct: 321 LVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEATKLWHMRLGHAGEKSLQIFTKQG 380 Query: 1153 LLKDVKVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLG 992 LLK K CKL+FCEHCVLGKQ+RVKFGTAIHNT+GILDYVHSDVWGP+KTPS+G Sbjct: 381 LLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIG 434 Score = 442 bits (1138), Expect = e-138 Identities = 222/315 (70%), Positives = 254/315 (80%), Gaps = 3/315 (0%) Frame = -3 Query: 937 YTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVR 758 +TMK K++VL IFLKWK +ENQTGRKIKVLRTDNGGEY SDPF +VC GI+RHFT+R Sbjct: 506 FTMKNKNDVLEIFLKWKDEVENQTGRKIKVLRTDNGGEYKSDPFLKVCQDCGIIRHFTIR 565 Query: 757 RTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSSAIGGKTPLE 578 +TPQQNGV+ERMN+ LVEKVRCMLSNA LGR+ WAEAVTYAQHL+NRLPSSAI GKTPLE Sbjct: 566 KTPQQNGVSERMNKILVEKVRCMLSNAELGRKFWAEAVTYAQHLVNRLPSSAIDGKTPLE 625 Query: 577 VWSGKPVTDYDSLRVFGSLVYYHVKESKLEPRAKRALFMGITSGVKGYRLWCLESKKILF 398 VWSGKP TDYDSL VFGS+ YYHV ESKL+PRAK+ALFMG + GVKGYRLWCLE+KK + Sbjct: 626 VWSGKPATDYDSLHVFGSIAYYHVIESKLDPRAKKALFMGFSPGVKGYRLWCLEAKKTII 685 Query: 397 SRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQVEVEEMAIIPAKN---DNPVTEDLSDD 227 SRDVTFDE AMLK V E DS QQVE KQVE E +IP +N D+ + E+ + Sbjct: 686 SRDVTFDESAMLKKVNPEGADSTPQQVECARKQVEFEPKVVIPTRNTTSDSAMAEE--ES 743 Query: 226 DEEEVQTQKPLDQSEPIAVRRPRREIHKPARFADMVAYALPVIDDDVPFTFREAVRSPES 47 DEEEV TQ+ QS PIAVRR RR+I KP+RF DMVAYALPV+ DD+P T+ EA+ S ES Sbjct: 744 DEEEVPTQESQQQSAPIAVRRQRRDIQKPSRFMDMVAYALPVV-DDIPSTYPEAIMSSES 802 Query: 46 EKWKGAMEEEMQSLQ 2 W GAMEEEMQSL+ Sbjct: 803 GNWAGAMEEEMQSLK 817 >gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum] Length = 1309 Score = 596 bits (1536), Expect = 0.0 Identities = 333/829 (40%), Positives = 474/829 (57%), Gaps = 15/829 (1%) Frame = -3 Query: 2443 RISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKT-INRLACGTIRS 2267 + +E F G+ F +W+ ++ L GL A+ + A I Sbjct: 5 KFDLEKFTGSNDFSLWRIKMKALLVHTGLGGALNPEPQDDTIDKKKIVETDSKAFSAILL 64 Query: 2266 CLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAF 2087 CL E E SA LW LE +LK+S N+L +KK L+ G + H+ F Sbjct: 65 CLGDEVLREVAEEVSALSLWNKLESLYLKRSLANRLYLKKSLYTIHLEEGKDLKKHMDEF 124 Query: 2086 NQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELX 1907 N+++ DL N+D+ +DED A+++LSSLP +EH T+L+GK+ +++A V +AL S EL Sbjct: 125 NKIILDLKNVDIKITDEDCAILMLSSLPRSYEHFVDTMLYGKETLTMAEVKSALNSKELH 184 Query: 1906 XXXXXXXXNIAADDEALVAXXXXXXXXXXXXXXXXXKAKLDKDECAFCHEKGHWKKDCPK 1727 + K +C CH++GH+KKDCP Sbjct: 185 KKNETKMESTGEGLNVRGRTYKRESRNEKGGKHRSQSRTRGKLKCFVCHKEGHFKKDCPD 244 Query: 1726 LKNKG----KAPQDACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNF 1559 + + K P DA V E LVVS ++ D W++DSGC++HM P+K WF N Sbjct: 245 RRARNPERRKDPGDAAVVSDGYESAEVLVVSRT-NKQDCWVMDSGCSFHMCPIKSWFQNL 303 Query: 1558 EEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGL 1379 E G V +GN+ CK GIGS+ LK HDG R +T+VRYVP+L++NL+S+G L+SKG Sbjct: 304 VEEESGHVLLGNNRECKVMGIGSVLLKMHDGCVRTITEVRYVPDLRRNLLSIGMLDSKGF 363 Query: 1378 IVTLRDGVLKATSGSLVVIKGIRRNNLYYYQGNTVIGTAAVADSRNEKESEAAKLWHMRL 1199 V + G +K GSL V++G + N LY + +TV G++ A K A+LWH+RL Sbjct: 364 NVKIEGGTMKVIKGSLTVMRGSQDNGLYILEASTVTGSSNAAVGGANK----ARLWHLRL 419 Query: 1198 GHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVW 1019 GH EK L L+KQ LL KV L FC+ CVLGK RV+F + ++GILDYVHSD+W Sbjct: 420 GHVSEKGLVELSKQNLLGRDKVDDLSFCDECVLGKCSRVRFKRSSTQSKGILDYVHSDLW 479 Query: 1018 GPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRT 839 GPS+ S GG Y+++ IDD+SR++WV T+K+KDE F WK +E QTG+KIK LRT Sbjct: 480 GPSRVASRGGARYYISVIDDYSRKLWVVTLKSKDEAFKAFKDWKMMVETQTGKKIKKLRT 539 Query: 838 DNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQH 659 DNG EY S F++ C + GIVRH+TV TPQQNG+AERMNRT++E+VRCML+++GL R Sbjct: 540 DNGLEYCSTEFKDFCKQEGIVRHYTVPNTPQQNGLAERMNRTILERVRCMLADSGLPRMF 599 Query: 658 WAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVYYHVKESKLEPRA 479 WAEAV A +LINR PS+A+ KTP EVW+G D+ +LR FG + H+++ KL+PRA Sbjct: 600 WAEAVVTASYLINRCPSTALEFKTPQEVWTGHR-PDFSNLRAFGCTAFAHIRQDKLQPRA 658 Query: 478 KRALFMGITSGVKGYRLWCLES--KKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTP 305 K+ + +G VKGY+LWC+E+ ++ L SRDV F+E + S+ T L V Sbjct: 659 KKCVLLGYPENVKGYKLWCIETGEERCLISRDVVFNEEEF--PLKSKGTSETLPGVHGAK 716 Query: 304 KQVEVEEMAIIPAKN---DNPVTEDLSDDDEEEVQTQKPLDQSEPIAVRRPRREIHKPAR 134 ++VE+ P N DN T+ +S D E++ D + R +R + P + Sbjct: 717 QEVEIS-----PRNNELVDN--TKVVSGPDAEDINAHAVGDYQ--LIRDREKRIVKAPQK 767 Query: 133 --FADMVAYALPV---IDDDVPFTFREAVRSPESEKWKGAMEEEMQSLQ 2 FAD+ A+A +D+ P ++ EAV S + W AM++EM SL+ Sbjct: 768 FGFADLTAFAFTAAYELDEVEPLSYEEAVSSRDKVHWIEAMKQEMDSLR 816 >gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] Length = 876 Score = 580 bits (1494), Expect = 0.0 Identities = 325/729 (44%), Positives = 434/729 (59%), Gaps = 23/729 (3%) Frame = -3 Query: 2119 GTTMNDHITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAV 1940 G+ + HI F ++ DL L V DED A++LL SLP ++HL TTL +GKD ++L Sbjct: 44 GSDLQQHINVFQNILTDLTRLRVQMDDEDKAIILLCSLPGSYDHLVTTLTYGKDSITLTS 103 Query: 1939 VCAALYSYELXXXXXXXXXNIAADDEALVAXXXXXXXXXXXXXXXXXKAKLDKD----EC 1772 + +AL S+ + E L K K+ EC Sbjct: 104 ITSALLSHGQRRQNAEG----GSQGEGLYVQGCSDRGRNKGKAGSGKKRSKSKNRKTSEC 159 Query: 1771 AFCHEKGHWKKDCPKLKNKGKAPQDACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYH 1592 C + GHWK+DCP +K +G + V +S E ++ +D WILDSGC+YH Sbjct: 160 YSCKQIGHWKRDCPNIK-QGSSTSANLVHTDDSCSEGDILCVSSSKCTDAWILDSGCSYH 218 Query: 1591 MSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNL 1412 M+P +EWF F + G VY+G+D AC TGIG I++ DG R LT+VRY+P L+KNL Sbjct: 219 MTPNREWFTTFRSGSFGFVYLGDDKACAITGIGQIKIAMDDGGVRTLTNVRYIPELRKNL 278 Query: 1411 ISLGALESKGLIVTL-RD-GVLKATSGSLVVIKGIRR-NNLYYYQGNTVIGTAAVADSRN 1241 ISLG L+ G RD +LK + G+L V++ R N+Y GNTV+G A +S N Sbjct: 279 ISLGTLQENGYSYRSDRDRDILKVSKGALTVMRVKRTAGNIYKLLGNTVVGDVASVESDN 338 Query: 1240 EKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTAIH 1061 + A KLWH+RLGH E+ + L K+ LLK V CK+D C++CVLGKQ RV+F H Sbjct: 339 D----ATKLWHLRLGHLSERGMMELHKRSLLKGVCSCKMDLCKYCVLGKQCRVRFKPMKH 394 Query: 1060 NTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTR 881 TEGILDYVHSDVWGP++ S+GG YFVTF DDFSR++WVY MK K EV F WK Sbjct: 395 KTEGILDYVHSDVWGPTREASMGGSRYFVTFTDDFSRKLWVYFMKQKSEVFSKFKLWKAE 454 Query: 880 IENQTGRKIKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAERMNRTLVEK 701 +ENQTGRKIK LR+DNG EYT+ F++ C ++GI RHF+VR+TPQQNGVAERMN +L E+ Sbjct: 455 VENQTGRKIKYLRSDNGTEYTNSQFEKFCEQHGIQRHFSVRKTPQQNGVAERMNMSLTER 514 Query: 700 VRCMLSNAGLGRQHWAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYDSLRVFGSL 521 RC+ AGL + WAE + A +LINR P +++ GK EVW+GKP+ D D+LR+FG Sbjct: 515 ARCLQLKAGLSKGFWAETINMACYLINRSPRASLEGKVAEEVWTGKPI-DLDNLRIFGCP 573 Query: 520 VYYHVK---ESKLEPRAKRALFMGITSGVKGYRLWCLESKKILFSRDVTFDEHAMLK-TV 353 + H+ SKL+P++K+ +F+G + GVKG++LW SKK++ SRDV FDE MLK + Sbjct: 574 TFVHISSEDRSKLDPKSKKCIFVGYSKGVKGFKLWDPVSKKMVLSRDVVFDEQFMLKQSR 633 Query: 352 TSEKTDSALQQVERTPKQVEVEEMAIIPAKNDN----------PVTEDLSDDDEEEVQTQ 203 +E T+SA + QVE+E P KN + P+ D +D + Sbjct: 634 ETEVTESAGGSSGKEVIQVELEP---TPNKNTSAVHQQPPEPTPINHDTADSGGASEDSV 690 Query: 202 KPLDQSEPIAVRRPRREIHKPAR--FADMVAYALPVIDDDVPFTFREAVRSPESEKWKGA 29 D +A R RR I+ P R F D+ AYAL D P TFREA+ S E +KW GA Sbjct: 691 GVDDYQ--LARDRERRSINPPQRYGFEDLAAYALLTSSGD-PSTFREAIVSQEKDKWMGA 747 Query: 28 MEEEMQSLQ 2 M EEM+SLQ Sbjct: 748 MMEEMESLQ 756 >gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1241 Score = 585 bits (1509), Expect = 0.0 Identities = 320/760 (42%), Positives = 454/760 (59%), Gaps = 32/760 (4%) Frame = -3 Query: 2185 LKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDVTFSDEDLALMLLSSL 2006 + K +K+ +K++LF + + ++ DH++AF ++VADL +++V + +EDL L+LL SL Sbjct: 1 MTKDLTSKMHLKQKLFLHKLQDDGSVMDHLSAFKEIVADLESMEVKYDEEDLGLILLCSL 60 Query: 2005 PDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAADDEALVAXXXXXXXX 1826 P + + T+L+ +D ++L V AL++ E + + + +V Sbjct: 61 PSSYANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNT 120 Query: 1825 XXXXXXXXXKAKLDKDE-------CAFCHEKGHWKKDCPKLKNKGKAPQD---------- 1697 + + C +C GH +C KL++K K + Sbjct: 121 NNKSRDKSSSIYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEE 180 Query: 1696 ---ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMG 1526 A V + +S+ E + + SD+WILD+ CTYHM P ++WF +E + GG V MG Sbjct: 181 GKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMG 240 Query: 1525 NDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKA 1346 +D C+ GIG++++K DG R L DVR++PNLK++LISL L+ KG + DG+LK Sbjct: 241 DDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKV 300 Query: 1345 TSGSLVVIKG-IRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQ 1172 T GSLVV+K I+ NLY+ +G T++G AAV+DS + S+A LWHMRLGH E L Sbjct: 301 TKGSLVVMKADIKYANLYHLRGTTILGNVAAVSDSLSN--SDATNLWHMRLGHMSEIGLA 358 Query: 1171 TLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLG 992 L+K+GLL + KL FCEHC+ GK KRVKF T+ H TEGILDYVHSD+WGP++ S G Sbjct: 359 ELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFG 418 Query: 991 GKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRKIKVLRTDNGGEYTSD 812 G Y +T +DD+SR+VW Y +K K + +F +WKT +E QT RK+K+LRTDNG E S Sbjct: 419 GARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSK 478 Query: 811 PFQEVCHKYGIVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQ 632 F+ C GIVRH+TV TPQQNGVAERMNRT++ K RCMLSNA L +Q WAEAV+ A Sbjct: 479 IFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNASLPKQFWAEAVSTAC 538 Query: 631 HLINRLPSSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVYYHVKESKLEPRAKRALFMGIT 452 +LINR PS AI KTP+EVWSG P +Y LRVFG Y HV KLEPR + +F+G Sbjct: 539 YLINRSPSYAIDKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYL 597 Query: 451 SGVKGYRLWCLESKKILFSRDVTFDEHAMLKTVTSEKTDSALQQVERTPKQVE-VEEMAI 275 SGVKGY+LWC E+KK++ SR+V F E ML S T+ ++ E+ QVE + Sbjct: 598 SGVKGYKLWCPETKKVVISRNVVFHESIMLHDKPS--TNVPVESQEKVSVQVEHLISSGH 655 Query: 274 IPAKNDNPVTED--LSDDDEEEVQTQKPLDQSEPIAVRRPRREIHKPARF---ADMVAYA 110 P K D + +D + +D + + Q P IA RP+R P R+ A++VAYA Sbjct: 656 APEKEDVAINQDAPVIEDSDSSIVQQSP---KRSIAKDRPKRNTKPPRRYIEEANIVAYA 712 Query: 109 LPVIDD----DVPFTFREAVRSPESEKWKGAMEEEMQSLQ 2 L V ++ P T+ +A+ S + +W AM +EM+SL+ Sbjct: 713 LSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLE 752 >gb|OTG30017.1| putative zinc finger, CCHC-type [Helianthus annuus] Length = 1308 Score = 582 bits (1500), Expect = 0.0 Identities = 343/835 (41%), Positives = 474/835 (56%), Gaps = 22/835 (2%) Frame = -3 Query: 2443 RISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRL--ACGTIR 2270 + +E FDG FG+W+ ++ L QG+ A+ + + L A I Sbjct: 5 KFELEKFDGKNDFGLWRVKMRALLVHQGIVDALAGEAKLPAGLTDKEKKDILEKAHSAII 64 Query: 2269 SCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITA 2090 L E SA +W LE ++ KS N+L +KKRL+ F+ SG ++ DH Sbjct: 65 LSLGDRVLREVSKETSAAGIWAKLESLYMTKSLANRLYLKKRLYTFQLASGKSLEDHTDE 124 Query: 2089 FNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYEL 1910 FN+++ DL N+DV+ DED A++ L+SLP FEH TL++G+D +S+ V AAL S EL Sbjct: 125 FNKVILDLENIDVSIDDEDKAIIFLASLPQTFEHFVDTLMYGRDSLSMEEVLAALNSKEL 184 Query: 1909 XXXXXXXXXNIAADDEALVAXXXXXXXXXXXXXXXXXKAKLDKDECAFCHEKGHWKKDCP 1730 E LV K+K K +C C+ + H+K+DCP Sbjct: 185 KKRSDAKEEI----GEGLVVRGRPEQKSFKGKNTPRSKSKF-KRKCYICNSEKHFKRDCP 239 Query: 1729 KLKNKGKAPQDACVAEGESEDEFS--------LVVSPLISRSDEWILDSGCTYHMSPVKE 1574 K K + G S D + LVVS ++ D WILDSG +YHM+P +E Sbjct: 240 DRFKKKKYDSGSKSQHGGSPDSSNDGYESADVLVVSKG-NQDDNWILDSGGSYHMTPHRE 298 Query: 1573 WFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGAL 1394 +F + E + G V +G+D C+ G G++ +K +G+ L +VR++P L +N+ISLG Sbjct: 299 YFQDIEMQDMGTVKLGDDRTCRVQGQGTVVIKLENGTELKLVNVRFIPELTRNIISLGIF 358 Query: 1393 ESKGLIVTLRDGVLKATSGSLVVIKGIRR-NNLYYYQGNTVIGTAAVADSRNEKESEAAK 1217 E +G V+L++G K GS+V+ G RR NN+Y G G + K S+A Sbjct: 359 EKEGCSVSLKNGKAKIIKGSMVIFTGTRRGNNIYMLDGKVSQGVNCSVE--RPKISDAV- 415 Query: 1216 LWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDY 1037 LWH RLGH ++ L L KQ +L + + FCEHC+LGK RV+F IH+T+GILDY Sbjct: 416 LWHRRLGHISDQGLNELKKQEVLGNFDGREAGFCEHCILGKSHRVRFTKGIHSTKGILDY 475 Query: 1036 VHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRK 857 VH+D+WGP++T SLGG YF++ +DDFSRRVWVY +K K E G F WK +E QT RK Sbjct: 476 VHADLWGPARTISLGGALYFLSIVDDFSRRVWVYVLKGKHEAFGKFKDWKILVETQTERK 535 Query: 856 IKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNA 677 +K LRTDNG E+ +D F + C KYGI RH TV TPQQNG+ ERMNRTL+ KVRCML ++ Sbjct: 536 VKKLRTDNGLEFCNDHFDQFCRKYGIARHRTVPGTPQQNGLVERMNRTLLNKVRCMLLSS 595 Query: 676 GLGRQHWAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVYYHVKES 497 G+ ++ WAEAVT A +L+NR PS+AIG KTP+E+WSGK +YD+LRVFG+L Y HVK+ Sbjct: 596 GMPKRFWAEAVTTAAYLVNRSPSTAIGLKTPMEMWSGKK-EEYDNLRVFGTLAYAHVKQG 654 Query: 496 KLEPRAKRALFMGITSGVKGYRLWCLE--SKKILFSRD-VTFDEHAMLKTVTSEKTDSAL 326 KLEPRA R + +G GVKG++LW ++ S K+ SRD V F E K V + A Sbjct: 655 KLEPRAVRGIILGYPEGVKGHKLWRIDDGSPKVFNSRDVVAFREDVYYKDVMGGSIEDA- 713 Query: 325 QQVERTPKQVEVEEMAIIPAKNDNPVTEDLSDDDEEEVQTQKPLDQSE--PIAVRRPRRE 152 + Q+EVE ++ + + DEEE+ QS IA RPRR+ Sbjct: 714 GFSNKEDVQIEVE-------------SDGMKNSDEEEMPESSSHGQSPGYSIAKERPRRQ 760 Query: 151 IHKPARFAD------MVAYALPVIDDDVPFTFREAVRSPESEKWKGAMEEEMQSL 5 I P RF D V A + D P T+ EA+ S +SE+W+ AM+EEM SL Sbjct: 761 IKPPLRFRDEEDISAYVFMAAELEDSTEPLTYNEAIASEDSERWQVAMQEEMDSL 815 >gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1280 Score = 581 bits (1498), Expect = 0.0 Identities = 337/857 (39%), Positives = 478/857 (55%), Gaps = 35/857 (4%) Frame = -3 Query: 2467 GRMLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTI-NR 2291 G + + +++ + D F +WQ ++ L QQ LD A+ + +R Sbjct: 32 GLIPMASLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTQDWSNDEKKKDR 91 Query: 2290 LACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTT 2111 A I LS E +A LW LE + K +K+ +K++LF + + + Sbjct: 92 KAMSYIHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGS 151 Query: 2110 MNDHITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCA 1931 + DH++ F ++VADL +++V + +EDL L+LL SLP + + T+L+ D + L V Sbjct: 152 VMDHLSTFKEIVADLESIEVKYDEEDLGLILLCSLPSSYANFRDTILYSHDTLILKEVYD 211 Query: 1930 ALYSYELXXXXXXXXXNIAADDEALVAXXXXXXXXXXXXXXXXXKAKLDKDE-------C 1772 AL++ E + + + +V + + + C Sbjct: 212 ALHAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSC 271 Query: 1771 AFCHEKGHWKKDCPKLKNK----------GKAPQD---ACVAEGESEDEFSLVVSPLISR 1631 +C GH +C KL++K GK ++ A V + +S+ E + + Sbjct: 272 KYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQT 331 Query: 1630 SDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVL 1451 SD+WILD+ TYHM P ++WF +E + GG V MG+D C+ GIG++++K DG R L Sbjct: 332 SDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTL 391 Query: 1450 TDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVIKG-IRRNNLYYYQGNTV 1274 +DVR++PNLK++LISL L+ KG + DG+LK T GSLVV+K I+ NLY+ +G T+ Sbjct: 392 SDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTI 451 Query: 1273 IGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLG 1097 +G AAV+DS + S+A LWHMRLGH E L L+K+ LL + KL FCEHC+ G Sbjct: 452 LGNVAAVSDSLSN--SDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFG 509 Query: 1096 KQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKD 917 K KRVKF T+ H TEGILDYVHSD+WGP+ S GG Y +T +DD+SR+VW Y +K K Sbjct: 510 KHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHKY 569 Query: 916 EVLGIFLKWKTRIENQTGRKIKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNG 737 + +F +WKT +E QT +K+K+LRTDNG E+ S F+ C GIV H+TV TPQQNG Sbjct: 570 QAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNG 629 Query: 736 VAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPV 557 VAERMN ++ K RCMLSNA L +Q WAEAV+ +LINR PS A KTP+EVWSG P Sbjct: 630 VAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSP- 688 Query: 556 TDYDSLRVFGSLVYYHVKESKLEPRAKRALFMGITSGVKGYRLWCLESKKILFSRDVTFD 377 +Y LRVFG Y HV KLEPRA + +F+G SGVKGY+LWC E+KK++ SR+V F Sbjct: 689 ANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFH 748 Query: 376 EHAML-----KTVTSEKTDSALQQVERTPKQVEVEEMAIIPAKNDNPVTEDLSDDDEEEV 212 E +L V E + A QVE E + D PV E D D V Sbjct: 749 ESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIE---DSDSSIV 805 Query: 211 QTQKPLDQSEPIAVRRPRREIHKPARF---ADMVAYALPVIDD----DVPFTFREAVRSP 53 Q IA +P+R I P R+ A++VAYAL V ++ P T+ EA+ S Sbjct: 806 QQ----SSKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSD 861 Query: 52 ESEKWKGAMEEEMQSLQ 2 + +W AM +EM+SL+ Sbjct: 862 DCNRWITAMHDEMESLK 878 >gb|PNX96445.1| copia LTR rider [Trifolium pratense] Length = 1318 Score = 582 bits (1500), Expect = 0.0 Identities = 335/841 (39%), Positives = 484/841 (57%), Gaps = 24/841 (2%) Frame = -3 Query: 2455 VPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRL--AC 2282 +P+ + +E F G FG+W+ ++ L QQG A+ + N + A Sbjct: 1 MPSTKYEIEKFTGVNDFGLWRLKMKALLVQQGCLEALKGEAAMNAELTAAEKTNMIEKAH 60 Query: 2281 GTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMND 2102 I L + E +A LW LE ++ KS N+L +K+ L+ F+ + + Sbjct: 61 SAILLSLGDKVLRQVSKETTASGLWAKLESLYMTKSLVNRLYLKQALYSFKMVEDKVLAE 120 Query: 2101 HITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCAALY 1922 + FN+L+ DL N+DV DED AL+LL +LP H + TLL+G++ ++ V +ALY Sbjct: 121 QLDMFNKLILDLENIDVKIDDEDQALLLLCALPRSHAHFKETLLYGRESLTFEEVQSALY 180 Query: 1921 SYELXXXXXXXXXNIAADDEALVAXXXXXXXXXXXXXXXXXKAKLDKDE-----CAFCHE 1757 S +L + E L ++K DE C C + Sbjct: 181 SKDLNERKEHKPSTVG---EGLAVKGKFLRKNGKFDKKGKSQSKSYSDEVSGIRCYHCKK 237 Query: 1756 KGHWKKDCP-KLKNKGKAPQDACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPV 1580 +GH +K CP +LK+ G +A + + + E LVVS SR EWI+DSGCT+HM+P Sbjct: 238 EGHTRKVCPERLKDHG-GNGNAAIVQDDFESSDVLVVSSSDSRK-EWIMDSGCTWHMTPN 295 Query: 1579 KEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLG 1400 K+ F + +GG V +GN+ ACK G+GS+R K HD S R+LT+VRYVP+LK+NL+SLG Sbjct: 296 KDLFEELCDQDGGSVLLGNNKACKIAGVGSVRFKLHDESIRLLTEVRYVPDLKRNLLSLG 355 Query: 1399 ALESKGLIVTLRDGVLKATSGSLVVIKGIRRNNLYYYQGNTVIGTAAVADSRNEKESEAA 1220 + KG + +L+ GS V++G+++ LY + V G+ V ++ ++E Sbjct: 356 EFDKKGYVFQGEKSILRVMKGSKEVLRGVKKQGLYTLEAEVVSGSTNVVSTKPLSKTE-- 413 Query: 1219 KLWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILD 1040 +WHMRLGH E+ L L KQ LL K+ KL FCE CV GK RVKF T G LD Sbjct: 414 -IWHMRLGHVSERGLVELGKQNLLGGDKIEKLKFCEPCVFGKSCRVKFNKGKQRTHGSLD 472 Query: 1039 YVHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGR 860 Y+H+D+WGP++ PS G YF++ +DD+SR++WV+ KTKDE F WKT +ENQTGR Sbjct: 473 YIHADLWGPARCPSHSGARYFLSIVDDYSRKLWVFIQKTKDETFENFKSWKTLVENQTGR 532 Query: 859 KIKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSN 680 K+K LRTDNG E+ ++ F C GI RH T TPQQNG+AER NRT++E+VRCML++ Sbjct: 533 KVKRLRTDNGLEFCNEAFDIFCAASGIARHRTTAGTPQQNGLAERFNRTILERVRCMLTS 592 Query: 679 AGLGRQHWAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVYYHVKE 500 AGL + WAEAV+ A +LINR PS+A+ KTP EVWSG P D D LRVFG + Y H+++ Sbjct: 593 AGLKKVFWAEAVSTATYLINRCPSTALDMKTPEEVWSGHP-PDLDKLRVFGCVAYAHIRQ 651 Query: 499 SKLEPRAKRALFMGITSGVKGYRLWCLE--SKKILFSRDVTFDEHAML--KTV----TSE 344 K+EPRA + +FMG GVK YRLWCLE K+ + SRDV F+E M KTV ++E Sbjct: 652 DKVEPRALKCMFMGYPEGVKAYRLWCLEPGHKRCITSRDVVFNEAEMAFKKTVDVGRSTE 711 Query: 343 KTDSALQQVERTPKQVEVEEMAIIPAKNDNPVTEDLSDDDEEEVQTQKPLDQSEP---IA 173 +D L+QVE P +VE + + + D+ EEE + + +++++ ++ Sbjct: 712 TSDEELEQVE-IPVEVEHVDAEL-----------HIPDEVEEEAENAEEVEETDDDYLLS 759 Query: 172 VRRPRREIHKPAR--FADMVAYAL---PVIDDDVPFTFREAVRSPESEKWKGAMEEEMQS 8 R RR I P R +AD++AYAL + D+ P ++E +RS +W AM++EM+S Sbjct: 760 RDRSRRVIKAPQRLGYADLIAYALISASEVLDEEPRDYKEVMRSRNKTEWLKAMDDEMKS 819 Query: 7 L 5 L Sbjct: 820 L 820 >gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1312 Score = 581 bits (1498), Expect = 0.0 Identities = 337/857 (39%), Positives = 478/857 (55%), Gaps = 35/857 (4%) Frame = -3 Query: 2467 GRMLVPNIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTI-NR 2291 G + + +++ + D F +WQ ++ L QQ LD A+ + +R Sbjct: 32 GLIPMASLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTQDWSNDEKKKDR 91 Query: 2290 LACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTT 2111 A I LS E +A LW LE + K +K+ +K++LF + + + Sbjct: 92 KAMSYIHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGS 151 Query: 2110 MNDHITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCA 1931 + DH++ F ++VADL +++V + +EDL L+LL SLP + + T+L+ D + L V Sbjct: 152 VMDHLSTFKEIVADLESIEVKYDEEDLGLILLCSLPSSYANFRDTILYSHDTLILKEVYD 211 Query: 1930 ALYSYELXXXXXXXXXNIAADDEALVAXXXXXXXXXXXXXXXXXKAKLDKDE-------C 1772 AL++ E + + + +V + + + C Sbjct: 212 ALHAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSC 271 Query: 1771 AFCHEKGHWKKDCPKLKNK----------GKAPQD---ACVAEGESEDEFSLVVSPLISR 1631 +C GH +C KL++K GK ++ A V + +S+ E + + Sbjct: 272 KYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAGCAQT 331 Query: 1630 SDEWILDSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVL 1451 SD+WILD+ TYHM P ++WF +E + GG V MG+D C+ GIG++++K DG R L Sbjct: 332 SDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTL 391 Query: 1450 TDVRYVPNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVIKG-IRRNNLYYYQGNTV 1274 +DVR++PNLK++LISL L+ KG + DG+LK T GSLVV+K I+ NLY+ +G T+ Sbjct: 392 SDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTI 451 Query: 1273 IGT-AAVADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLG 1097 +G AAV+DS + S+A LWHMRLGH E L L+K+ LL + KL FCEHC+ G Sbjct: 452 LGNVAAVSDSLSN--SDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFG 509 Query: 1096 KQKRVKFGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKD 917 K KRVKF T+ H TEGILDYVHSD+WGP+ S GG Y +T +DD+SR+VW Y +K K Sbjct: 510 KHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHKY 569 Query: 916 EVLGIFLKWKTRIENQTGRKIKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNG 737 + +F +WKT +E QT +K+K+LRTDNG E+ S F+ C GIV H+TV TPQQNG Sbjct: 570 QAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNG 629 Query: 736 VAERMNRTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPV 557 VAERMN ++ K RCMLSNA L +Q WAEAV+ +LINR PS A KTP+EVWSG P Sbjct: 630 VAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSP- 688 Query: 556 TDYDSLRVFGSLVYYHVKESKLEPRAKRALFMGITSGVKGYRLWCLESKKILFSRDVTFD 377 +Y LRVFG Y HV KLEPRA + +F+G SGVKGY+LWC E+KK++ SR+V F Sbjct: 689 ANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFH 748 Query: 376 EHAML-----KTVTSEKTDSALQQVERTPKQVEVEEMAIIPAKNDNPVTEDLSDDDEEEV 212 E +L V E + A QVE E + D PV E D D V Sbjct: 749 ESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIE---DSDSSIV 805 Query: 211 QTQKPLDQSEPIAVRRPRREIHKPARF---ADMVAYALPVIDD----DVPFTFREAVRSP 53 Q IA +P+R I P R+ A++VAYAL V ++ P T+ EA+ S Sbjct: 806 QQ----SSKRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSD 861 Query: 52 ESEKWKGAMEEEMQSLQ 2 + +W AM +EM+SL+ Sbjct: 862 DCNRWITAMHDEMESLK 878 >gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 2340 Score = 594 bits (1532), Expect = 0.0 Identities = 341/837 (40%), Positives = 476/837 (56%), Gaps = 35/837 (4%) Frame = -3 Query: 2407 FGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTI-NRLACGTIRSCLSREQKYAFKN 2231 F +WQ ++ L QQ LD A+ + +R A I LS Sbjct: 224 FSLWQVKMRAVLAQQDLDDALSGFDKRTHDWSNDEKKRDRKAMSYIHLHLSNNILQEVLK 283 Query: 2230 ENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDV 2051 E A LW LE + K +K+ +K+ LF + + ++ DH++AF +++ADL +++V Sbjct: 284 EEIAAGLWLKLEQICMTKDLTSKMHLKQTLFLHKLQDDGSVMDHLSAFKEIIADLESMEV 343 Query: 2050 TFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAA 1871 + +EDL L+LL SLP + + T+L+ +D ++L V AL+ E + + Sbjct: 344 KYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHVKEKMKKMVPSEGSNSQ 403 Query: 1870 DDEALVAXXXXXXXXXXXXXXXXXKAKLDKDE-------CAFCHEKGHWKKDCPKLKNK- 1715 + +V + + + C +C GH +C KL +K Sbjct: 404 AEGLIVWGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDIFECWKLHDKD 463 Query: 1714 ---------GKAPQD---ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEW 1571 GK ++ A V + +S+ E + + SD+WIL++ C YHM P ++W Sbjct: 464 KRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILNTACIYHMCPNRDW 523 Query: 1570 FFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALE 1391 F +E + G V MG+D C+ GIG++++K DG R L+DVR++PNLK++LISL L+ Sbjct: 524 FATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 583 Query: 1390 SKGLIVTLRDGVLKATSGSLVVIKG-IRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAK 1217 KG + DG+LK T GSLVV+K I+ NLY+ +G T++G AAV+DS + S+A Sbjct: 584 RKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSN--SDATN 641 Query: 1216 LWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDY 1037 LWHMRLGH E L L+K+GLL + KL FCEHC+ GK KRVKF T+ H TEGILDY Sbjct: 642 LWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDY 701 Query: 1036 VHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRK 857 VHSD+WGP++ S GG Y +T +DD+SR+VW Y +K K + +F +WKT +E QT RK Sbjct: 702 VHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERK 761 Query: 856 IKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNA 677 +K+LRTDNG E+ S F+ C GIVRH+TV TPQQNGVAERMNRT++ K RC+LSNA Sbjct: 762 VKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNA 821 Query: 676 GLGRQHWAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVYYHVKES 497 GL +Q WAEAV+ A +LINR PS AI KTP+EVWSG P +Y LRVFG Y HV Sbjct: 822 GLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVDNG 880 Query: 496 KLEPRAKRALFMGITSGVKGYRLWCLESKKILFSRDVTFDEHAML-----KTVTSEKTDS 332 KLEPRA + +F+G SGVKGY+LWC E+KK++ SR+V F E ML V E + Sbjct: 881 KLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEK 940 Query: 331 ALQQVERTPKQVEVEEMAIIPAKNDNPVTEDLSDDDEEEVQTQKPLDQSEPIAVRRPRRE 152 A QVE E + D PV E D + Q P IA RP+R Sbjct: 941 ASVQVEHLISSGHAPEKEDVAINQDEPVIE----DSNSSIVQQSP---KRSIAKDRPKRN 993 Query: 151 IHKPARF---ADMVAYALPVIDD----DVPFTFREAVRSPESEKWKGAMEEEMQSLQ 2 I P R+ A++VAYAL V ++ P T+ EA+ S + +W AM +EM+SL+ Sbjct: 994 IKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLE 1050 >gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 780 Score = 557 bits (1436), Expect = 0.0 Identities = 315/760 (41%), Positives = 444/760 (58%), Gaps = 17/760 (2%) Frame = -3 Query: 2449 NIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTINRL--ACGT 2276 N + +E F G FG+W+ ++ L QQG AI + N + A Sbjct: 3 NTKYDIEKFSGENDFGLWRIKMEAILIQQGCAEAIKGEEKMSSSLTQKEKTNMIEKARSA 62 Query: 2275 IRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHI 2096 I CL + E +A +W LE ++ KS ++L +K+RL+ F+ ++ D + Sbjct: 63 IILCLGDKALREVAREKTAAAMWLKLESLYMTKSLAHRLCLKQRLYSFKMTETKSIVDQL 122 Query: 2095 TAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLETTLLHGKD-DVSLAVVCAALYS 1919 FN+++ DL N++V DED AL+LL+SLP +EH + +L+GK+ D++L V ++ + Sbjct: 123 AEFNKILDDLENIEVQLEDEDKALLLLNSLPRNYEHFKDAILYGKEQDITLDEVQTSIRT 182 Query: 1918 YELXXXXXXXXXNIAADDEALVAXXXXXXXXXXXXXXXXXKAKL-----DKDECAFCHEK 1754 EL + + E+L ++K K +C +CH+ Sbjct: 183 KELQRQQDNKTDD---NGESLNVSRGRSEKKGQSQKGKKARSKSKIGDRSKFKCFYCHKV 239 Query: 1753 GHWKKDCPKLKNKGKAPQD----ACVAEG-ESEDEFSLVVSPLISRSDEWILDSGCTYHM 1589 GH+KK+CP+ K+ D A +++G ES D LVV+ ++ D W++DSGC+YHM Sbjct: 240 GHFKKNCPERNRDQKSSADSADIAAISDGYESADV--LVVTTSQTQKD-WVMDSGCSYHM 296 Query: 1588 SPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLI 1409 P K++F + GG V +G+D+ C+ GIG++RLK D +L DVRYVP+LK+NLI Sbjct: 297 CPKKDYFETLKLKEGGTVLLGDDHPCQVQGIGTVRLKMFDNREYILKDVRYVPDLKRNLI 356 Query: 1408 SLGALESKGLIVTLRDGVLKATSGSLVVIKGIR--RNNLYYYQGNTVIGTAAVADSRNEK 1235 S+ +S G + GVLK +GSLV+ KG + N L+ G+TV+ A++A + +K Sbjct: 357 SISMFDSLGYATKTQHGVLKILNGSLVIAKGNKDKNNGLFVLDGSTVMAHASIARNDIDK 416 Query: 1234 ESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTAIHNT 1055 KLWH+RLGH E+ L L KQ LLK K+ KL+FCEHCVLGK RVKFGT IH + Sbjct: 417 ----TKLWHLRLGHVSERGLIELEKQNLLKGDKLDKLEFCEHCVLGKSHRVKFGTGIHVS 472 Query: 1054 EGILDYVHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIE 875 +YVH+D+WGPS+ +LGG YF+T IDDF+RRVW+Y +K K E F W T I+ Sbjct: 473 SRPFEYVHADLWGPSRVKTLGGGSYFLTIIDDFTRRVWLYVLKDKTETYKKFRDWYTLIQ 532 Query: 874 NQTGRKIKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAERMNRTLVEKVR 695 NQ K+KVLRTDNG E+ S+ F E C GI RH TV TPQQNG+AERMNRT++E+VR Sbjct: 533 NQLETKLKVLRTDNGLEFLSEQFAEFCRNQGIKRHRTVPHTPQQNGLAERMNRTILERVR 592 Query: 694 CMLSNAGLGRQHWAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVY 515 CML +GL ++ W EA T A +LINR PSSA+ KTP+E W GKPV DY +LRVFGSL Y Sbjct: 593 CMLLGSGLSKKFWGEAATTAAYLINRCPSSALNNKTPMEAWHGKPV-DYSNLRVFGSLAY 651 Query: 514 YHVKESKLEPRAKRALFMGITSGVKGYRLWCLE--SKKILFSRDVTFDEHAMLKTVTSEK 341 HVKE KLEPRA + +F+G GVKGY+LW LE K + SRDVTFDE + + Sbjct: 652 AHVKEGKLEPRAVKCVFIGYPDGVKGYKLWKLEKGGGKCIISRDVTFDETKLGILEEQQM 711 Query: 340 TDSALQQVERTPKQVEVEEMAIIPAKNDNPVTEDLSDDDE 221 +S+ + + + I +N +T+ S E Sbjct: 712 EESSSKDHVQFEVESSTHSSEINQTENYEEITDGASSSGE 751 >gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1278 Score = 571 bits (1472), Expect = 0.0 Identities = 323/786 (41%), Positives = 451/786 (57%), Gaps = 21/786 (2%) Frame = -3 Query: 2296 NRLACGTIRSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSG 2117 +R A I+ LS + E +A +LW LE + K +K+ +K +LF + + Sbjct: 57 DRKALSLIQLHLSNDILQEVLQEKTAAELWLKLESICMSKDLTSKMHIKMKLFSHKLQES 116 Query: 2116 TTMNDHITAFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVV 1937 ++ +HI+ F ++VADL++++V F DEDL L+LL SLP +E+ T+L +D+++LA V Sbjct: 117 GSVLNHISVFKEIVADLVSMEVQFDDEDLGLLLLCSLPSSYENFRDTILLSRDELTLAEV 176 Query: 1936 CAALYSYELXXXXXXXXXNIAADDEALVAXXXXXXXXXXXXXXXXXKAK-----LDKDEC 1772 AL + E + + + V K++ K C Sbjct: 177 YEALQNREKMKGMVQSDASSSKGEALQVKGRSEQRTYNDSNDRDKSKSRGRSKSRGKKFC 236 Query: 1771 AFCHEKGHWKKDCPKLKNKGKAPQDACV-----AEGESEDEFSLVVSPLISRSDEWILDS 1607 +C +K H+ K+C KL+NK K D A+ + +V + ++ DEWILD+ Sbjct: 237 KYCKKKIHFIKECWKLQNKEKRKSDGKASVVTSAKNSDSGDCLVVFAGCVASHDEWILDT 296 Query: 1606 GCTYHMSPVKEWFFNFEEI-NGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVP 1430 C++H+ ++WF +++ + NG VV MGNDN + GIGS+++K HDG TR L DVR++P Sbjct: 297 ACSFHIYINRDWFSSYKSVQNGDVVRMGNDNPREIVGIGSVQIKTHDGITRTLKDVRHIP 356 Query: 1429 NLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVIKG-IRRNNLYYYQGNTVIGTAAVA 1253 + +NLISL L+++G + GV+K + GSLV + G + NLY +G+T+ G+ A Sbjct: 357 GMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAA 416 Query: 1252 DSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFG 1073 + + E LWHMRLGH E + L K+ LL + FCE CV GK KRVKF Sbjct: 417 -AVTKDEPNKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCERCVFGKHKRVKFN 475 Query: 1072 TAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLK 893 T++H T+GILDYVH+D+WGPS+ PSLGG Y +T IDD+SR+VW Y +K KD+ F + Sbjct: 476 TSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKE 535 Query: 892 WKTRIENQTGRKIKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAERMNRT 713 WK IE QT +++KVLRTDN GE+ SD F + C K GIVRH T+ TPQQNGVAERMNRT Sbjct: 536 WKVMIERQTEKEVKVLRTDNAGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRT 595 Query: 712 LVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYDSLRV 533 ++ K RCMLSNA + ++ WAEA A +LINR PS + KTP+E+WSG P DY LRV Sbjct: 596 IISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEIWSGMP-ADYSQLRV 654 Query: 532 FGSLVYYHVKESKLEPRAKRALFMGITSGVKGYRLWCLESKKILFSRDVTFDEHAMLKTV 353 FG Y HV KLEPRA + LF+G GVKGY+LW E+ K SR V F+E M Sbjct: 655 FGCTAYAHVDNEKLEPRAIKCLFLGYGLGVKGYKLWNPETNKTFMSRSVVFNESVMFNDS 714 Query: 352 TSEKTDSALQQVERTPKQVEVEEMAIIPAKNDNPVTEDLSDDDEEEVQTQKPL--DQSEP 179 E+ V+VE + D+ TE + +D + VQ P+ Q EP Sbjct: 715 LPTDVIPGGSDEEQQYVSVQVEHV-------DDQETEIVGNDVNDTVQHSPPVLQPQDEP 767 Query: 178 IAVRRPRREIHKPARF---ADMVAYAL----PVIDDDVPFTFREAVRSPESEKWKGAMEE 20 IA RR +R P R DMV YA V + P T+ EAV S + EKW AM+E Sbjct: 768 IAHRRTKRSCGAPVRLIEECDMVYYAFSCAEQVENTLEPATYTEAVVSGDREKWISAMQE 827 Query: 19 EMQSLQ 2 EMQSL+ Sbjct: 828 EMQSLE 833 >dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] Length = 1601 Score = 578 bits (1490), Expect = 0.0 Identities = 333/817 (40%), Positives = 463/817 (56%), Gaps = 35/817 (4%) Frame = -3 Query: 2407 FGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTI-NRLACGTIRSCLSREQKYAFKN 2231 F +WQ ++ L QQ LD A+ + +R A I LS Sbjct: 17 FSLWQVKMRAVLAQQDLDDALSGFDKRTHDWSNDEKKRDRKAMSYIHLHLSNNILQEVLK 76 Query: 2230 ENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHITAFNQLVADLLNLDV 2051 E A LW LE + K +K+ +K+ LF + + ++ DH++AF +++ADL +++V Sbjct: 77 EEIAAGLWLKLEQICMTKDLTSKMHLKQTLFLHKLQDDGSVMDHLSAFKEIIADLESMEV 136 Query: 2050 TFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYELXXXXXXXXXNIAA 1871 + +EDL L+LL SLP + + T+L+ +D ++L V AL+ E + + Sbjct: 137 KYDEEDLGLILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHVKEKMKKMVPSEGSNSQ 196 Query: 1870 DDEALVAXXXXXXXXXXXXXXXXXKAKLDKDE-------CAFCHEKGHWKKDCPKLKNK- 1715 + +V + + + C +C GH +C KL +K Sbjct: 197 AEGLIVWGRQQEKNTKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDIFECWKLHDKD 256 Query: 1714 ---------GKAPQD---ACVAEGESEDEFSLVVSPLISRSDEWILDSGCTYHMSPVKEW 1571 GK ++ A V + +S+ E + + SD+WIL++ C YHM P ++W Sbjct: 257 KRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILNTACIYHMCPNRDW 316 Query: 1570 FFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYVPNLKKNLISLGALE 1391 F +E + G V MG+D C+ GIG++++K DG R L+DVR++PNLK++LISL L+ Sbjct: 317 FATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376 Query: 1390 SKGLIVTLRDGVLKATSGSLVVIKG-IRRNNLYYYQGNTVIGT-AAVADSRNEKESEAAK 1217 KG + DG+LK T GSLVV+K I+ NLY+ +G T++G AAV+DS + S+A Sbjct: 377 RKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSN--SDATN 434 Query: 1216 LWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVKFGTAIHNTEGILDY 1037 LWHMRLGH E L L+K+GLL + KL FCEHC+ GK KRVKF T+ H TEGILDY Sbjct: 435 LWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDY 494 Query: 1036 VHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIFLKWKTRIENQTGRK 857 VHSD+WGP++ S GG Y +T +DD+SR+VW Y +K K + +F +WKT +E QT RK Sbjct: 495 VHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERK 554 Query: 856 IKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAERMNRTLVEKVRCMLSNA 677 +K+LRTDNG E+ S F+ C GIVRH+TV TPQQNGVAERMNRT++ K RC+LSNA Sbjct: 555 VKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNA 614 Query: 676 GLGRQHWAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYDSLRVFGSLVYYHVKES 497 GL +Q WAEAV+ A +LINR PS AI KTP+EVWSG P +Y LRVFG Y HV Sbjct: 615 GLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSP-ANYSDLRVFGCTAYAHVDNG 673 Query: 496 KLEPRAKRALFMGITSGVKGYRLWCLESKKILFSRDVTFDEHAML-----KTVTSEKTDS 332 KLEPRA + +F+G SGVKGY+LWC E+KK++ SR+V F E ML V E + Sbjct: 674 KLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVMLHDKPSTNVPVESQEK 733 Query: 331 ALQQVERTPKQVEVEEMAIIPAKNDNPVTEDLSDDDEEEVQTQKPLDQSEPIAVRRPRRE 152 A QVE E + D PV E D + Q P IA RP+R Sbjct: 734 ASVQVEHLISSGHAPEKEDVAINQDEPVIE----DSNSSIVQQSP---KRSIAKDRPKRN 786 Query: 151 IHKPARF---ADMVAYALPVIDD----DVPFTFREAV 62 I P R+ A++VAYAL V ++ P T+ EA+ Sbjct: 787 IKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAI 823 >emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] Length = 1181 Score = 566 bits (1458), Expect = 0.0 Identities = 317/785 (40%), Positives = 449/785 (57%), Gaps = 28/785 (3%) Frame = -3 Query: 2449 NIRISVETFDGTGHFGMWQGEVLDCLFQQGLDIAIXXXXXXXXXXXXXKTI-NRLACGTI 2273 +++ + D F +WQ ++ L QQ LD A+ + +R A I Sbjct: 3 SLKYDLPLLDRDTRFSLWQVKMRAVLAQQELDDALSGFDKRTQDWSNDEKKRDRKAMSYI 62 Query: 2272 RSCLSREQKYAFKNENSAYKLWKALEDKFLKKSGQNKLLMKKRLFRFEYRSGTTMNDHIT 2093 LS E +A LW LE + K +K+ +K++LF + + ++ DH++ Sbjct: 63 HLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHLS 122 Query: 2092 AFNQLVADLLNLDVTFSDEDLALMLLSSLPDEFEHLETTLLHGKDDVSLAVVCAALYSYE 1913 AF ++VADL +++V + ++DLAL+LL SLP + + T+L+ +D ++L V AL++ E Sbjct: 123 AFKEIVADLESMEVKYDEKDLALILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHAKE 182 Query: 1912 LXXXXXXXXXNIAADDEALVAXXXXXXXXXXXXXXXXXKAKLDKDE-------CAFCHEK 1754 + + + +V + + + C +C Sbjct: 183 KMKKMVPSEGSNSQAEGLVVRGSQQEKNTNNKSRDKSSSSYRGRSKSRGRYKSCKYCKRD 242 Query: 1753 GHWKKDCPKLKNK----------GKAPQD---ACVAEGESEDEFSLVVSPLISRSDEWIL 1613 GH C KL++K GK ++ A V + +S+ E + + SD+WIL Sbjct: 243 GHDISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWIL 302 Query: 1612 DSGCTYHMSPVKEWFFNFEEINGGVVYMGNDNACKTTGIGSIRLKNHDGSTRVLTDVRYV 1433 D+ CTYHM P ++WF +E + GG V MG+D C+ GIG++++K DG R L+DVR++ Sbjct: 303 DTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHI 362 Query: 1432 PNLKKNLISLGALESKGLIVTLRDGVLKATSGSLVVIKG-IRRNNLYYYQGNTVIGTAA- 1259 PNLK++LISL L+ KG + DG+LK T GSLVV+K I+ NLY+ QG T++G A Sbjct: 363 PNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGNVAT 422 Query: 1258 VADSRNEKESEAAKLWHMRLGHAGEKSLQTLAKQGLLKDVKVCKLDFCEHCVLGKQKRVK 1079 V+DS + S+A LWHMRLGH E L L+K+GLL + KL FCEHC+ GK KRVK Sbjct: 423 VSDSLSN--SDATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKHKRVK 480 Query: 1078 FGTAIHNTEGILDYVHSDVWGPSKTPSLGGKHYFVTFIDDFSRRVWVYTMKTKDEVLGIF 899 F T+ H TEGILDYVHSD+WGP++ S GG Y +T +DD+SR+VW Y +K K + +F Sbjct: 481 FNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFNVF 540 Query: 898 LKWKTRIENQTGRKIKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVRRTPQQNGVAERMN 719 +WKT +E QT RK+K+LRTDNG E+ S F+ C GIVRH+TV TPQQNGVAERMN Sbjct: 541 KEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMN 600 Query: 718 RTLVEKVRCMLSNAGLGRQHWAEAVTYAQHLINRLPSSAIGGKTPLEVWSGKPVTDYDSL 539 R ++ K RCMLSNAGL +Q WAEAV+ A +LINR PS A KTP+EVWSG P +Y L Sbjct: 601 RIIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYA-NKKTPIEVWSGSP-ANYSDL 658 Query: 538 RVFGSLVYYHVKESKLEPRAKRALFMGITSGVKGYRLWCLESKKILFSRDVTFDEHAML- 362 +VFG Y HV KLEPRA + +F+G S VKGY+LWC E+KK++ SR+V F E ML Sbjct: 659 KVFGCTAYAHVDNGKLEPRAIKCIFLGYPSSVKGYKLWCPETKKVVISRNVVFHESIMLH 718 Query: 361 ----KTVTSEKTDSALQQVERTPKQVEVEEMAIIPAKNDNPVTEDLSDDDEEEVQTQKPL 194 V E + A QVE E + D PV ED SD + ++ + Sbjct: 719 DKPSTNVPVESQEKASVQVEHLINSGHAPEKEDVAINQDAPVIED-SDSSTVQQSPKRSI 777 Query: 193 DQSEP 179 + +P Sbjct: 778 AKDKP 782