BLASTX nr result

ID: Rehmannia31_contig00015795 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00015795
         (610 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011077229.1| LOW QUALITY PROTEIN: protein RDM16-like [Ses...   145   2e-36
ref|XP_012858461.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   115   5e-26
ref|XP_022880782.1| protein RDM16-like isoform X1 [Olea europaea...    66   4e-09
ref|XP_022890897.1| protein RDM16-like isoform X3 [Olea europaea...    64   2e-08

>ref|XP_011077229.1| LOW QUALITY PROTEIN: protein RDM16-like [Sesamum indicum]
          Length = 802

 Score =  145 bits (365), Expect = 2e-36
 Identities = 85/185 (45%), Positives = 104/185 (56%)
 Frame = -2

Query: 555 MDKENSSRKRRESDSYRDREASKDHHRRSKXXXXXXXXXXXXXXXXXXXXXXXXXXKTER 376
           MDKENS+RKRRESDS+RDRE+ K+HH RSK                           T+R
Sbjct: 1   MDKENSNRKRRESDSHRDRESCKEHHHRSKHDDDRRRSDEHHRRRSDSR--------TDR 52

Query: 375 EGSRDRDTHREHERSHSVXXXXXXXXXXXXXXXXXRTRVHEDNGREKRRFEDAKIREDEK 196
           EGSRDRD+ RE ERSHSV                 RTRV+E+NGREK RFED K+++D++
Sbjct: 53  EGSRDRDSRRERERSHSVERKKRKERDESEERSDKRTRVYEENGREKSRFEDVKVKDDDR 112

Query: 195 NXXXXXXXXXXXKSVKKDAKDESRDTGKRVETVSVANGVATGPIXXXXXXXXXXSVARSH 16
                       KSVKKDAK ESRD+G + +  SVAN +ATGP+           VA + 
Sbjct: 113 ERKEGEGFGSEGKSVKKDAKYESRDSGHQSKAGSVANSLATGPVSTPSSISPETFVAHTS 172

Query: 15  SPATK 1
           SPATK
Sbjct: 173 SPATK 177


>ref|XP_012858461.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
           [Erythranthe guttata]
 gb|EYU19876.1| hypothetical protein MIMGU_mgv1a001331mg [Erythranthe guttata]
          Length = 838

 Score =  115 bits (287), Expect = 5e-26
 Identities = 79/199 (39%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
 Frame = -2

Query: 555 MDKENSSRKRRESDSYRD--------REASKDHHRR------SKXXXXXXXXXXXXXXXX 418
           M+KENSSRKRR+S S +D        R  S DHHRR       +                
Sbjct: 1   MEKENSSRKRRQSGSSKDHHHHHDEERRRSDDHHRRRSDSKAEREGSRERDADDEERRRS 60

Query: 417 XXXXXXXXXXKTEREGSRDRDTHREHERSHSVXXXXXXXXXXXXXXXXXRTRVHEDNGRE 238
                     K EREGSR+RD  RE ERS SV                 RTRV+E++GRE
Sbjct: 61  DERHRRRSDSKAEREGSRERDVRRERERSRSVERKKRKERGDSEERSDKRTRVYEESGRE 120

Query: 237 KRRFEDAKIREDEKNXXXXXXXXXXXKSVKKDAKDESRDTGKRVETVSVANGVATGPIXX 58
           KRRFED +++ED+ +           KSVK D+  ESRD GKR ET  VANG ATGP   
Sbjct: 121 KRRFEDVRVKEDDIDGKETDGFGFEGKSVKNDSNYESRDGGKRAETGLVANGAATGPPTA 180

Query: 57  XXXXXXXXSVARSHSPATK 1
                     AR+H   TK
Sbjct: 181 QSSISPETMEARNHPSTTK 199


>ref|XP_022880782.1| protein RDM16-like isoform X1 [Olea europaea var. sylvestris]
          Length = 839

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 61/210 (29%), Positives = 83/210 (39%), Gaps = 25/210 (11%)
 Frame = -2

Query: 555 MDKENSSRKRRESDSYRDREASKDHHR----RSKXXXXXXXXXXXXXXXXXXXXXXXXXX 388
           M++E SSR+ R+S S++DRE+SKDHH+    RSK                          
Sbjct: 1   MEREKSSRRHRDSISHKDRESSKDHHKHHHHRSKHRDVEDDRHRSDDHYDKRREHSIDFE 60

Query: 387 KT-----EREGSRDRDT--------HREHERSHSVXXXXXXXXXXXXXXXXXR------- 268
           K+     EREGSRDR+          R +ER  SV                         
Sbjct: 61  KSIDHRHEREGSRDRENGHGPEKSYERSYERQDSVERKLSEKRKVRGESEERNGRVGDEK 120

Query: 267 -TRVHEDNGREKRRFEDAKIREDEKNXXXXXXXXXXXKSVKKDAKDESRDTGKRVETVSV 91
             R+ E+NGR  RRFED K +E+E +              +  + D ++  G    T  +
Sbjct: 121 RARISEENGRGSRRFEDNKSKEEEHSEYARERREESSFWREYQSIDSAQSNG----TGRI 176

Query: 90  ANGVATGPIXXXXXXXXXXSVARSHSPATK 1
           A G ATGP+              SHS ATK
Sbjct: 177 ATGDATGPLAMQSSMLPGTPGNHSHSSATK 206


>ref|XP_022890897.1| protein RDM16-like isoform X3 [Olea europaea var. sylvestris]
          Length = 842

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 62/212 (29%), Positives = 81/212 (38%), Gaps = 27/212 (12%)
 Frame = -2

Query: 555 MDKENSSRKRRESDSYRDREASKDHHR----RSKXXXXXXXXXXXXXXXXXXXXXXXXXX 388
           M+ E SSR+ R+SDS+RDRE SKDHH+    RSK                          
Sbjct: 1   MENEKSSRRHRDSDSHRDRELSKDHHKHHHHRSKHRDGENDRHRSDDHYHKRREHSNDFE 60

Query: 387 KT-----EREGSRDRDTH----------REHERSHSVXXXXXXXXXXXXXXXXXRTR--- 262
           K+     EREGSRDR+            R +ER  SV                  +R   
Sbjct: 61  KSIDHRHEREGSRDRENRHRREKSYEKERSYEREDSVERKLSEKRKVRGDSEERNSRRGD 120

Query: 261 -----VHEDNGREKRRFEDAKIREDEKNXXXXXXXXXXXKSVKKDAKDESRDTGKRVETV 97
                + E+N R  RRFED K+ EDE +                + +D+  D+G    T 
Sbjct: 121 EKRARISEENVRGSRRFEDNKVEEDENSDYAKERKLQSSF----EREDQPFDSGLSNGTG 176

Query: 96  SVANGVATGPIXXXXXXXXXXSVARSHSPATK 1
            +  G  TG +          S   SHS ATK
Sbjct: 177 QITTGDVTGLLAMPSSMVHGTSGDHSHSSATK 208


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