BLASTX nr result

ID: Rehmannia31_contig00014009 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00014009
         (909 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011096423.1| far upstream element-binding protein 2-like ...   117   1e-25
gb|PIN13248.1| K-homology type RNA binding protein [Handroanthus...   110   4e-23

>ref|XP_011096423.1| far upstream element-binding protein 2-like [Sesamum indicum]
          Length = 673

 Score =  117 bits (292), Expect = 1e-25
 Identities = 76/203 (37%), Positives = 82/203 (40%), Gaps = 10/203 (4%)
 Frame = -3

Query: 685 QNRVRNPSMSGGYPQQGYQARPQNNW--TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 512
           +NR+RNPSMSGGYPQQGYQARP  NW                                  
Sbjct: 287 ENRMRNPSMSGGYPQQGYQARPPTNWGQPGPPMQQPGYGYAQAGAYPGPSPQYNMNQPSY 346

Query: 511 XXXXXXXXXXGYATDWDQSTAPQNQQAAQGGSYDYYNXXXXXXXXXXXXTDGSXXXXXXX 332
                     GYAT WDQS+APQNQQ AQGG YDYYN              G+       
Sbjct: 347 SGYPPQPTSGGYATGWDQSSAPQNQQTAQGGGYDYYNQQQPPQQQQAHGGPGAPTDGSGY 406

Query: 331 XXXXXXXXXXXXXXXXXXXQ--------SGYSQPQSNPNAXXXXXXXXXXXXXXNVSNPT 176
                                       SGY Q Q NP +              NVSNPT
Sbjct: 407 GYSQAPAYSQGQAYGQDGYGGYHAGAAQSGYGQTQPNPASGYDQQQQGYNSTYGNVSNPT 466

Query: 175 PDGQTPSYAAQGEANQAPPPGQA 107
           PDG T SY  QGEANQAP PGQ+
Sbjct: 467 PDGHTTSYGTQGEANQAPAPGQS 489


>gb|PIN13248.1| K-homology type RNA binding protein [Handroanthus impetiginosus]
          Length = 658

 Score =  110 bits (274), Expect = 4e-23
 Identities = 74/203 (36%), Positives = 80/203 (39%), Gaps = 10/203 (4%)
 Frame = -3

Query: 685 QNRVRNPSMSGGYPQQGYQARPQNNWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 506
           +NRVRN S SGGYPQQGYQ RP +NW                                  
Sbjct: 287 ENRVRNSSTSGGYPQQGYQTRPPSNWGHTGPPMQQPTYGYIQPGAYPGGPSPQYNMNQPP 346

Query: 505 XXXXXXXXG---YATDWDQSTA-PQNQQAAQGGSYDYYNXXXXXXXXXXXXTDGSXXXXX 338
                       YAT WDQ+TA PQNQQAAQGG YDYYN              G+     
Sbjct: 347 YSGYPPQTTSGGYATGWDQTTAAPQNQQAAQGGGYDYYNQQQPPQQQQAHAGSGAPTDSS 406

Query: 337 XXXXXXXXXXXXXXXXXXXXXQ------SGYSQPQSNPNAXXXXXXXXXXXXXXNVSNPT 176
                                       SGYSQPQ+NP A               V N T
Sbjct: 407 GYGYGQAQAYSQGQGYGQDGYGGYHAAQSGYSQPQTNPGAGYDQQQQGYNSSYGAVPNQT 466

Query: 175 PDGQTPSYAAQGEANQAPPPGQA 107
            DG TPSY AQGEANQAP  GQ+
Sbjct: 467 ADGHTPSYGAQGEANQAPASGQS 489


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