BLASTX nr result

ID: Rehmannia31_contig00013884 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00013884
         (401 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIM98566.1| hypothetical protein CDL12_28955 [Handroanthus im...    51   1e-06
ref|XP_011101401.1| glycine-rich RNA-binding protein RZ1A isofor...    53   7e-06
ref|XP_011101393.1| glycine-rich RNA-binding protein RZ1A isofor...    53   1e-05

>gb|PIM98566.1| hypothetical protein CDL12_28955 [Handroanthus impetiginosus]
          Length = 224

 Score = 50.8 bits (120), Expect(2) = 1e-06
 Identities = 31/59 (52%), Positives = 36/59 (61%)
 Frame = +2

Query: 2   MAISMADEAETQVVVVDQGMISIAVTVLVRTSVRHLVASVHNSCINDSLLMWKMSTRSM 178
           M   M DE ET VVV  Q M SI VT LVR SV   VA VH+   +D+  +W+ STRSM
Sbjct: 95  MVTGMVDEVETLVVVGVQEMTSIVVTGLVRMSVLLEVAIVHDRHGSDNATVWRASTRSM 153



 Score = 28.9 bits (63), Expect(2) = 1e-06
 Identities = 29/70 (41%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
 Frame = +1

Query: 154 VEDVYKINALLFLYHFC*SSA*LREALS*E-------W--SHAILLIL----TKFVELCY 294
           VE VYKINA LF        +  R +LS         W  SH  L  +    TKFVELC 
Sbjct: 155 VEGVYKINAFLFRIASAELLSARRGSLSYLHFFSLFFWGDSHLSLSTMFDLSTKFVELCC 214

Query: 295 EPLHFRTLPS 324
             LHF +L S
Sbjct: 215 GLLHFGSLLS 224


>ref|XP_011101401.1| glycine-rich RNA-binding protein RZ1A isoform X2 [Sesamum indicum]
          Length = 175

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 24/41 (58%), Positives = 27/41 (65%)
 Frame = +1

Query: 1   NGDKYXXXXXXXXXXXXXXNDKYSRDRSGPYERPSSGGFRS 123
           NGD+Y              NDKYSR+RSGPYERPSSGG+RS
Sbjct: 135 NGDRYGGRSRDSGNRGGSGNDKYSRERSGPYERPSSGGYRS 175


>ref|XP_011101393.1| glycine-rich RNA-binding protein RZ1A isoform X1 [Sesamum indicum]
          Length = 207

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 24/41 (58%), Positives = 27/41 (65%)
 Frame = +1

Query: 1   NGDKYXXXXXXXXXXXXXXNDKYSRDRSGPYERPSSGGFRS 123
           NGD+Y              NDKYSR+RSGPYERPSSGG+RS
Sbjct: 167 NGDRYGGRSRDSGNRGGSGNDKYSRERSGPYERPSSGGYRS 207


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