BLASTX nr result
ID: Rehmannia31_contig00013867
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00013867
(414 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020550234.1| probable pre-mRNA-splicing factor ATP-depend... 79 3e-14
ref|XP_018505292.1| PREDICTED: probable pre-mRNA-splicing factor... 74 1e-12
ref|XP_019054600.1| PREDICTED: probable pre-mRNA-splicing factor... 74 2e-12
ref|XP_018504413.1| PREDICTED: probable pre-mRNA-splicing factor... 74 2e-12
ref|XP_019251035.1| PREDICTED: probable pre-mRNA-splicing factor... 73 3e-12
ref|XP_024020023.1| probable pre-mRNA-splicing factor ATP-depend... 70 3e-11
ref|XP_018505294.1| PREDICTED: probable pre-mRNA-splicing factor... 69 5e-11
ref|XP_018504414.1| PREDICTED: probable pre-mRNA-splicing factor... 69 7e-11
gb|EOX95333.1| RNA helicase family protein isoform 2 [Theobroma ... 63 1e-08
ref|XP_020234831.1| probable pre-mRNA-splicing factor ATP-depend... 62 3e-08
ref|XP_022757802.1| probable pre-mRNA-splicing factor ATP-depend... 61 4e-08
ref|XP_020234833.1| probable pre-mRNA-splicing factor ATP-depend... 57 1e-06
ref|XP_020523642.1| probable pre-mRNA-splicing factor ATP-depend... 55 4e-06
ref|XP_020983712.1| probable pre-mRNA-splicing factor ATP-depend... 55 5e-06
>ref|XP_020550234.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
isoform X2 [Sesamum indicum]
Length = 565
Score = 78.6 bits (192), Expect = 3e-14
Identities = 38/43 (88%), Positives = 41/43 (95%)
Frame = +1
Query: 286 IVAVSQYSLMKQMVSSRLYTSADLPWASSVITTFFSSTQLLCP 414
+++VSQYSLMKQMVSS LYTSADLPWASSVIT FFSSTQLLCP
Sbjct: 522 MLSVSQYSLMKQMVSSGLYTSADLPWASSVITNFFSSTQLLCP 564
>ref|XP_018505292.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 isoform X2 [Pyrus x bretschneideri]
Length = 571
Score = 73.9 bits (180), Expect = 1e-12
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +1
Query: 280 MLIVAVSQYSLMKQMVSSRLYTSADLPWASSVITTFFSSTQLLCP 414
ML VAVSQY LMKQMVSSRLY SA++PWASSVIT F STQLLCP
Sbjct: 526 MLSVAVSQYYLMKQMVSSRLYASANVPWASSVITNLFLSTQLLCP 570
>ref|XP_019054600.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 isoform X2 [Nelumbo nucifera]
Length = 561
Score = 73.6 bits (179), Expect = 2e-12
Identities = 36/43 (83%), Positives = 39/43 (90%)
Frame = +1
Query: 286 IVAVSQYSLMKQMVSSRLYTSADLPWASSVITTFFSSTQLLCP 414
+++VSQYSLMKQMVSSRLY SADLPWASSVIT F STQLLCP
Sbjct: 518 MLSVSQYSLMKQMVSSRLYASADLPWASSVITISFFSTQLLCP 560
>ref|XP_018504413.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 isoform X3 [Pyrus x bretschneideri]
Length = 571
Score = 73.6 bits (179), Expect = 2e-12
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +1
Query: 280 MLIVAVSQYSLMKQMVSSRLYTSADLPWASSVITTFFSSTQLLCP 414
ML VAVSQY LMKQMVSSRLY SA++PWASSVIT F STQLLCP
Sbjct: 526 MLSVAVSQYYLMKQMVSSRLYPSANVPWASSVITNLFLSTQLLCP 570
>ref|XP_019251035.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 isoform X2 [Nicotiana attenuata]
Length = 560
Score = 72.8 bits (177), Expect = 3e-12
Identities = 35/43 (81%), Positives = 39/43 (90%)
Frame = +1
Query: 286 IVAVSQYSLMKQMVSSRLYTSADLPWASSVITTFFSSTQLLCP 414
+++VSQYSLMK+MVSSRLY SADL WAS VIT FFSSTQLLCP
Sbjct: 517 MLSVSQYSLMKKMVSSRLYASADLQWASPVITNFFSSTQLLCP 559
>ref|XP_024020023.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
isoform X2 [Morus notabilis]
Length = 564
Score = 70.1 bits (170), Expect = 3e-11
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +1
Query: 286 IVAVSQYSLMKQMVSSRLYTSADLPWASSVITTFFSSTQLLCP 414
+++VSQY LMKQMVS LY SADLPWASSVIT FF STQLLCP
Sbjct: 521 MLSVSQYYLMKQMVSCGLYASADLPWASSVITNFFLSTQLLCP 563
>ref|XP_018505294.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 isoform X3 [Pyrus x bretschneideri]
Length = 569
Score = 69.3 bits (168), Expect = 5e-11
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = +1
Query: 286 IVAVSQYSLMKQMVSSRLYTSADLPWASSVITTFFSSTQLLCP 414
+++VSQY LMKQMVSSRLY SA++PWASSVIT F STQLLCP
Sbjct: 526 MLSVSQYYLMKQMVSSRLYASANVPWASSVITNLFLSTQLLCP 568
>ref|XP_018504414.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 isoform X4 [Pyrus x bretschneideri]
Length = 569
Score = 68.9 bits (167), Expect = 7e-11
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = +1
Query: 286 IVAVSQYSLMKQMVSSRLYTSADLPWASSVITTFFSSTQLLCP 414
+++VSQY LMKQMVSSRLY SA++PWASSVIT F STQLLCP
Sbjct: 526 MLSVSQYYLMKQMVSSRLYPSANVPWASSVITNLFLSTQLLCP 568
>gb|EOX95333.1| RNA helicase family protein isoform 2 [Theobroma cacao]
Length = 555
Score = 62.8 bits (151), Expect = 1e-08
Identities = 30/35 (85%), Positives = 33/35 (94%)
Frame = +1
Query: 286 IVAVSQYSLMKQMVSSRLYTSADLPWASSVITTFF 390
+++VSQYSLMKQMVSSRLY SADLPWASSVIT FF
Sbjct: 520 MLSVSQYSLMKQMVSSRLYASADLPWASSVITKFF 554
>ref|XP_020234831.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
isoform X2 [Cajanus cajan]
Length = 556
Score = 61.6 bits (148), Expect = 3e-08
Identities = 31/37 (83%), Positives = 32/37 (86%)
Frame = +1
Query: 280 MLIVAVSQYSLMKQMVSSRLYTSADLPWASSVITTFF 390
ML VAVSQY+LMKQMV SRLY SADLPWASSVI FF
Sbjct: 519 MLSVAVSQYNLMKQMVWSRLYASADLPWASSVIINFF 555
>ref|XP_022757802.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
isoform X3 [Durio zibethinus]
Length = 555
Score = 61.2 bits (147), Expect = 4e-08
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +1
Query: 286 IVAVSQYSLMKQMVSSRLYTSADLPWASSVITTFF 390
+++VSQYSLMKQMVSSRLY SADLPW SSVIT FF
Sbjct: 520 MLSVSQYSLMKQMVSSRLYASADLPWTSSVITKFF 554
>ref|XP_020234833.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
isoform X3 [Cajanus cajan]
Length = 554
Score = 57.0 bits (136), Expect = 1e-06
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = +1
Query: 286 IVAVSQYSLMKQMVSSRLYTSADLPWASSVITTFF 390
+++VSQY+LMKQMV SRLY SADLPWASSVI FF
Sbjct: 519 MLSVSQYNLMKQMVWSRLYASADLPWASSVIINFF 553
>ref|XP_020523642.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
isoform X2 [Amborella trichopoda]
Length = 553
Score = 55.5 bits (132), Expect = 4e-06
Identities = 30/44 (68%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = +1
Query: 286 IVAVSQYSLMKQMVSSRLYTSADLPWASSVITTF-FSSTQLLCP 414
+++V +LMKQMVSSRLY SADL WASSVI+ F F STQLL P
Sbjct: 509 MLSVLSITLMKQMVSSRLYASADLEWASSVISNFSFFSTQLLSP 552
>ref|XP_020983712.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
isoform X2 [Arachis duranensis]
Length = 555
Score = 55.1 bits (131), Expect = 5e-06
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +1
Query: 286 IVAVSQYSLMKQMVSSRLYTSADLPWASSVITTFF 390
+++VSQYSLMK++V SRLY SADLPWASSVI FF
Sbjct: 520 MLSVSQYSLMKKIVWSRLYASADLPWASSVIINFF 554