BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00013280
         (1059 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617...   165   2e-41
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...   164   4e-41
ref|XP_024172036.1| uncharacterized protein LOC112178052 [Rosa c...   157   2e-40
dbj|GAY61101.1| hypothetical protein CUMW_207140, partial [Citru...   150   8e-37
ref|XP_019198078.1| PREDICTED: uncharacterized protein LOC109191...   149   4e-36
ref|XP_015969290.1| uncharacterized protein LOC107492746 [Arachi...   148   1e-35
gb|PNX61534.1| ribonuclease H, partial [Trifolium pratense]           139   5e-35
ref|XP_020962370.1| uncharacterized protein LOC110264586 [Arachi...   146   5e-35
ref|XP_010675428.1| PREDICTED: uncharacterized protein LOC104891...   139   6e-35
gb|PNX96793.1| ribonuclease H, partial [Trifolium pratense]           142   9e-35
gb|PRQ45142.1| putative ribonuclease H-like domain, reverse tran...   140   1e-34
ref|XP_015385487.1| PREDICTED: uncharacterized protein LOC107176...   138   1e-34
gb|PNX58727.1| ribonuclease H [Trifolium pratense]                    139   1e-34
gb|PRQ55763.1| putative RNA-directed DNA polymerase [Rosa chinen...   145   1e-34
ref|XP_015941361.1| uncharacterized protein LOC107466866 [Arachi...   145   1e-34
ref|XP_016173438.1| uncharacterized protein LOC107615941 [Arachi...   145   1e-34
gb|PNX98065.1| ribonuclease H [Trifolium pratense]                    144   3e-34
ref|XP_015385738.1| PREDICTED: uncharacterized protein LOC107177...   137   3e-34
gb|PNX61540.1| ribonuclease H, partial [Trifolium pratense]           136   7e-34
gb|PNY07715.1| ribonuclease H [Trifolium pratense]                    142   1e-33

>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
          Length = 1238

 Score =  165 bits (417), Expect = 2e-41
 Identities = 106/352 (30%), Positives = 165/352 (46%), Gaps = 4/352 (1%)
 Frame = +2

Query: 8    FGQYSVKSGYKLALTMXXXXXXXXXXXXXXXXXXXXXXXXNIPPKVQIFVWKIIHGILPV 187
            +GQYSVKSGY++AL +                         +P K++IF+W+ +  +LP 
Sbjct: 888  YGQYSVKSGYQIALKLKCPNSPCSSDSSLSQWNVIWAA--ELPEKIKIFMWRAVKNLLPT 945

Query: 188  RAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRLPDALLTTPATMTDM 367
             + L R+K V  PICRRCG   E   H L +C  +   WR +        L     M  +
Sbjct: 946  ASNLWRRKIVGSPICRRCGVKNEDVIHALLDCKVAKKVWRNAGCAEEIEKLVQQDLMAVL 1005

Query: 368  IQAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNKDLTHQDCFALALKCLNDYQSTQK-- 541
            ++   + G   L  L  +L W +WY++N+  F+NK    Q   A A   ++ ++  +K  
Sbjct: 1006 VEIQRKKGKKELE-LIVVLCWTIWYSQNLFIFENKREDSQLSIARAEANMDSFKRIKKPF 1064

Query: 542  -KQPPMHSQNTHTSWQRPPEGTIKINTDASITSLDG-TGIGVVIRTHNGEITHTMSKKLV 715
             K      +N    W  PP G  KIN DA++   D   G+GV+IR  NGE+     ++  
Sbjct: 1065 SKILEKQQRNRKQVWNPPPSGWFKINVDAAVNVKDQIAGLGVIIRNSNGEVVAAAIQRSF 1124

Query: 716  HKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHRTEVNLTYLGSIIEDLRE 895
             +      EA A   G+  A+    + ++IE+D Q++V      +V +     II D++E
Sbjct: 1125 FQLSSTHMEAEAVILGIKSAQRAGFSPMIIETDSQEVVDLTLSKKVRIIETSWIIADIQE 1184

Query: 896  LAADFPNFSMRYIPRTANVLAHHMASFAFSVSCNGLYFGSFPHELVHFIPSF 1051
                   FS++Y PR  NV AH +A  A     +  + GSFP ++V   PSF
Sbjct: 1185 SIQSSNQFSIQYTPRECNVTAHDLAKKALEFENSVFWEGSFPPQIVSLFPSF 1236


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score =  164 bits (415), Expect = 4e-41
 Identities = 105/349 (30%), Positives = 171/349 (48%), Gaps = 9/349 (2%)
 Frame = +2

Query: 11   GQYSVKSGYKLALTMXXXXXXXXXXXXXXXXXXXXXXXXNIPPKVQIFVWKIIHGILPVR 190
            G+YSVKSGY+LAL                          ++P KV+IF+W+ +  ILP  
Sbjct: 1103 GEYSVKSGYQLALNQNFPNEPESSNSSSRLWKIPWML--DLPEKVKIFMWRALKNILPTA 1160

Query: 191  AALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRLPDALLTTPAT--MTD 364
              L +++ + +PIC+RC   +ET  H L EC  +   W  +PL      +  P+     D
Sbjct: 1161 ENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPL------IVQPSKDHNQD 1214

Query: 365  MIQAISEMGDDSLHC---LFAMLLWVLWYARNMLTFQNKDLTHQDCFALALKCLNDYQST 535
               AI EM   S      L  +  WV+W ARN   F+ K    +   A A   L  YQ  
Sbjct: 1215 FFSAIQEMWSRSSTAEAELMIVYCWVIWSARNKFIFEGKKSDSRFLAAKADSVLKAYQRV 1274

Query: 536  QKKQPPMHSQNT---HTSWQRPPEGTIKINTDASITSLDG-TGIGVVIRTHNGEITHTMS 703
             K      +++       W+ P +  +K+N DA++++ D   G+G ++R   G+I     
Sbjct: 1275 SKPGNVHGAKDRGIDQQKWKPPSQNVLKLNVDAAVSTKDQKVGLGAIVRDAEGKILAVGI 1334

Query: 704  KKLVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHRTEVNLTYLGSIIE 883
            K+   +  V +AEA A   GL +A  I ++++++ESDC+++V+  + T+ + T +  I+ 
Sbjct: 1335 KQAQFRERVSLAEAEAIHWGLQVANQISSSSLIVESDCKEVVELLNNTKGSRTEIHWILS 1394

Query: 884  DLRELAADFPNFSMRYIPRTANVLAHHMASFAFSVSCNGLYFGSFPHEL 1030
            D+R  + +F      +IPRT N  AH +A FA   S   ++ G+FP E+
Sbjct: 1395 DVRRESKEFKQVQFSFIPRTCNTYAHALAKFALRNSSTDVWVGTFPAEV 1443


>ref|XP_024172036.1| uncharacterized protein LOC112178052 [Rosa chinensis]
          Length = 441

 Score =  157 bits (397), Expect = 2e-40
 Identities = 95/287 (33%), Positives = 144/287 (50%), Gaps = 4/287 (1%)
 Frame = +2

Query: 128 NIPPKVQIFVWKIIHGILPVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWR 307
           NIPPKV++FVW+++ GILP RA LS K  +PD  C  C  +I+   H  R+C  +S+FW 
Sbjct: 132 NIPPKVRVFVWRLLKGILPTRAGLSHKVSLPDDHCVFCNQSIDDGLHVFRDCDVTSYFWL 191

Query: 308 ASPLRLPDALLTTPATMTDMIQAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNKDLTHQ 487
            + L L    +   A + D    + ++ +    CLF M  WV+W  RN + ++       
Sbjct: 192 LTTLGLKVNKVAC-ANVIDWALNVIDILNWDQRCLFFMAFWVIWSKRNNVLWKGSFFCAS 250

Query: 488 DCFALALKCLNDYQSTQKKQPPMHSQNTHTSWQRPPEGTIKINTDASITSLDGT-GIGVV 664
           +     +K L DYQS         ++   T WQ PP G +K+N   S  +  G  G+GVV
Sbjct: 251 NAAQWVVKLLEDYQSVH-ITGGTKARREKTKWQNPPSGRLKVNVGGSYRADHGDGGVGVV 309

Query: 665 IRTHNGEITHTMSKKLVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHR 844
           I    G     +++   H    +  EA AC+ GL LA      A+ +ESDC  +V A  +
Sbjct: 310 IHDAYGVCVPALARYFPHASSALHMEAEACRAGLLLAFHQNMTALEMESDCSLVVAALQQ 369

Query: 845 TEVNLTYLGSIIEDLRELAADFPNFSMRYIPRTANVLAH---HMASF 976
              + + +G I++D +     F  F +R+I R AN  A+   H+ASF
Sbjct: 370 KVEDRSEIGRIMDDCKSYLTSFHPFQVRHIFREANGAANRLVHLASF 416


>dbj|GAY61101.1| hypothetical protein CUMW_207140, partial [Citrus unshiu]
          Length = 638

 Score =  150 bits (379), Expect = 8e-37
 Identities = 102/347 (29%), Positives = 160/347 (46%), Gaps = 1/347 (0%)
 Frame = +2

Query: 11   GQYSVKSGYKLALTMXXXXXXXXXXXXXXXXXXXXXXXXNIPPKVQIFVWKIIHGILPVR 190
            GQY+VKSGY+ AL +                         +P K++IFVW+    +LP  
Sbjct: 120  GQYTVKSGYQTALNIRFPAMPSSSEFSKNEWNIIWSLA--LPKKIRIFVWRAAKNLLPSD 177

Query: 191  AALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRLPDALLTTPATMTDMI 370
              L ++K V +P C+ C   IE   H L +C  +   WR S L   D        +  ++
Sbjct: 178  ENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLS-LFDNDIQAAPGQDILSLL 236

Query: 371  QAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNKDLTHQDCFALALKCLNDYQSTQKKQP 550
              +  M  ++   LFA +LW  W ARN   F+ K    Q   A A   +  Y+  Q    
Sbjct: 237  HGVKRMRSNADVDLFAAMLWAKWNARNQWLFKGKRENPQSVVAKAEAVMEAYKRVQ---- 292

Query: 551  PMHSQNTHTSWQRPPEGTIKINTDASITSLDG-TGIGVVIRTHNGEITHTMSKKLVHKFP 727
            P   +     W  P EG +KINTDA+  S     G+G VIR  NG++T T  K       
Sbjct: 293  PSADKVAQLGWNPPQEGFVKINTDAATNSEKNLAGLGAVIRDENGQVTATAIKVSKFHGS 352

Query: 728  VVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHRTEVNLTYLGSIIEDLRELAAD 907
            V  AEA A + GL +AK      V++ESD Q++V   +  + + + +  ++ ++++L   
Sbjct: 353  VAYAEAEAMEWGLQVAKDAHVKDVIMESDSQEVVSLVNNRQGSRSEIYWVVLEIQKLKES 412

Query: 908  FPNFSMRYIPRTANVLAHHMASFAFSVSCNGLYFGSFPHELVHFIPS 1048
            F + S  Y  R+ N +AH +A  A       ++ GS+P +++   P+
Sbjct: 413  FDHVSCVYTHRSCNAIAHSLAKLALEKCETVVWKGSYPLQVIRPPPN 459


>ref|XP_019198078.1| PREDICTED: uncharacterized protein LOC109191859 [Ipomoea nil]
          Length = 1165

 Score =  149 bits (377), Expect = 4e-36
 Identities = 102/349 (29%), Positives = 159/349 (45%), Gaps = 7/349 (2%)
 Frame = +2

Query: 11   GQYSVKSGYKLALTMXXXXXXXXXXXXXXXXXXXXXXXXNIPPKVQIFVWKIIHGILPVR 190
            G Y+VK GY+L +                          +IPPKV+ F+W+   GILPVR
Sbjct: 834  GCYTVKHGYRLLME-----NQLPNSCSDGFQAWQALWALSIPPKVKNFLWRCARGILPVR 888

Query: 191  AALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRLPDALLTTPATMTDMI 370
              L +++      C  CG   ET  H   +C ++   W  + +R     L   A      
Sbjct: 889  ENLHKRRAWIGGGCPLCGCNAETMNHLFCDCGFAQQLWSHADIRQGREFLQFMA------ 942

Query: 371  QAISEMGDDSLHC--LFAMLLWVLWYARNMLTFQNKDLTHQDCFALALKCLNDYQSTQ-- 538
                 +G  S H     A  LW +W  RN + +QN+  T     A+A++ + + Q T   
Sbjct: 943  ---ESIGGTSTHSGIRLAATLWTIWLIRNEVVWQNRTSTS----AVAIERVRNMQRTWEG 995

Query: 539  ---KKQPPMHSQNTHTSWQRPPEGTIKINTDASITSLDGTGIGVVIRTHNGEITHTMSKK 709
               K      S      W  P  GT+K NTDA+++  DG G   VIR H G     MS +
Sbjct: 996  VFVKNGTVQVSARPLVDWTPPLRGTLKCNTDAAVSG-DGAGFASVIRDHEGHFVAAMSGR 1054

Query: 710  LVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHRTEVNLTYLGSIIEDL 889
            L+ +    +AE +  KE LT  KS   N  ++ESDC     AF+    + +Y+G +++  
Sbjct: 1055 LMGEGDPFMAEVLGAKEALTWLKSQSQNNFILESDCLNFCNAFNSCLSDFSYVGLVVKQC 1114

Query: 890  RELAADFPNFSMRYIPRTANVLAHHMASFAFSVSCNGLYFGSFPHELVH 1036
            + +A D  N ++ ++ R+AN +AH +A    S+S +G++ G  P  + H
Sbjct: 1115 QSIARDIGNVTVSHVKRSANRVAHELARATVSMSVSGVWSGVPPDCIAH 1163


>ref|XP_015969290.1| uncharacterized protein LOC107492746 [Arachis duranensis]
          Length = 1389

 Score =  148 bits (373), Expect = 1e-35
 Identities = 105/345 (30%), Positives = 156/345 (45%), Gaps = 22/345 (6%)
 Frame = +2

Query: 11   GQYSVKSGYKLAL----TMXXXXXXXXXXXXXXXXXXXXXXXXNIPPKVQIFVWKIIHGI 178
            GQYSV+SGY+ A     T                          +P KV++F+WK +HGI
Sbjct: 914  GQYSVRSGYQAAKKEKDTKMETTQGKASTSHNLKEIWKRIWRLPVPKKVKMFLWKAVHGI 973

Query: 179  LPVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRL-PDA------- 334
            LPV A L + + +P PIC  C +  ET EH L  CPW+   W  S L++ P A       
Sbjct: 974  LPVNANLHQHRSIPTPICSICQEQEETTEHMLLLCPWTRAVWFGSNLQIVPKASNVRTFE 1033

Query: 335  --LLTTPATMTDMIQAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNKDLTHQDCFALAL 508
              LLTT     D I+A +    + + C    + W +W ARN   FQ   L  Q     + 
Sbjct: 1034 QWLLTT----MDKIRAETGNEHEKVLCNLGCICWCIWKARNKHIFQQTKLNPQQTIIQSQ 1089

Query: 509  KCLNDYQSTQKKQ-------PPMHSQNTHTSWQRPPEGTIKINTDASITSLDG-TGIGVV 664
            +   ++    K+           + +    +W+ PP   +KIN DA+     G      +
Sbjct: 1090 QIAAEHIIATKELNRDNNDITGRNGEKRRITWRPPPRSKVKINIDAAFHRETGIAASAAI 1149

Query: 665  IRTHNGEITHTMSKKLVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHR 844
            IR   G I   ++ K      V+ AEA A +E + L K+++ +  +IESDC  +VQA  +
Sbjct: 1150 IRDWQGNIITGITSKF-KTISVLAAEAQAYREAIILTKNLQISNCIIESDCLPLVQAI-K 1207

Query: 845  TEVNLTYLGSIIEDLRELAADFPNFSMRYIPRTANVLAHHMASFA 979
                L    +II D+  +  + PN    + PR  NVLAH +A+ A
Sbjct: 1208 ARTPLAEADAIIRDILLMLEEAPNVRATWTPREGNVLAHQLAAMA 1252


>gb|PNX61534.1| ribonuclease H, partial [Trifolium pratense]
          Length = 291

 Score =  139 bits (350), Expect = 5e-35
 Identities = 80/279 (28%), Positives = 137/279 (49%), Gaps = 5/279 (1%)
 Frame = +2

Query: 128 NIPPKVQIFVWKIIHGILPVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWR 307
           N+PPK    +W+ +   +PV+ +L ++    DP+C RC D +ET +H   +C W+   W 
Sbjct: 11  NVPPKHSHLIWRSLRNAIPVKGSLFKRGIRCDPLCPRCLDHVETIQHVFMDCEWTKKVWF 70

Query: 308 ASPLRLPDALLTTPATMTDMIQAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNKDLTHQ 487
           ASPL L +  L       D I  +    D         +++ +W ARN L FQ KDL  Q
Sbjct: 71  ASPLTL-NLNLNYLTEFYDWITYMINNTDKECMEKIVAIIYEIWNARNQLVFQEKDLPPQ 129

Query: 488 DCFALALKCLNDYQSTQKKQPPMHSQ-----NTHTSWQRPPEGTIKINTDASITSLDGTG 652
           +  A+AL+ L++YQ+  +KQ P  +      + +T W  P    +K N DA ++S     
Sbjct: 130 EISAIALRRLHEYQTYGEKQIPFQNPMAKGCSNNTRWSPPLRDILKANVDAHLSSDGHWF 189

Query: 653 IGVVIRTHNGEITHTMSKKLVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQ 832
            G+V+R  +G I    ++       +++ EA+   + L   + I  + V++E D Q +V+
Sbjct: 190 SGMVLRRSDGSIVGAATRSHKGSSEILMGEALGLNDVLDWLEKIDEHQVILEMDSQTIVK 249

Query: 833 AFHRTEVNLTYLGSIIEDLRELAADFPNFSMRYIPRTAN 949
           A     +     G ++        + PN  +R++PR+AN
Sbjct: 250 AIREKAIVRKNWGRVVRRCIGFLGENPNADIRWVPRSAN 288


>ref|XP_020962370.1| uncharacterized protein LOC110264586 [Arachis ipaensis]
          Length = 1123

 Score =  146 bits (369), Expect = 5e-35
 Identities = 98/345 (28%), Positives = 154/345 (44%), Gaps = 19/345 (5%)
 Frame = +2

Query: 2    TTFGQYSVKSGYKLAL----TMXXXXXXXXXXXXXXXXXXXXXXXXNIPPKVQIFVWKII 169
            T  G Y+VKSGY+ A                                +P K+++F+WK +
Sbjct: 618  TAEGHYTVKSGYRAAKEEKDAKEEEKLNEASSSQNHREIWGTIWRLPVPQKIRMFLWKAV 677

Query: 170  HGILPVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRLPDALLTTP 349
             GILPV + L +++C   P C  C D  ET EH L  CPW+   W  S +++        
Sbjct: 678  EGILPVNSNLYKRRCAVKPSCSICQDENETVEHALLLCPWTRAVWFGSSIQITPTAYNVA 737

Query: 350  A---TMTDMIQAI-SEMGDDS--LHCLFAMLLWVLWYARNMLTFQNKDLTHQDCFALALK 511
            +    + D +Q I  E G D   + C    + W +W  RN   FQ   +  +     A +
Sbjct: 738  SFGRWIWDTVQKIRRETGKDQERILCKLGCVCWYIWKTRNQYIFQQATINPKQAIINAEQ 797

Query: 512  CLNDYQSTQKKQPPMHSQN-------THTSWQRPPEGTIKINTDASITSLDG-TGIGVVI 667
               +Y +T       H+ +          +W+ PP+  +K+NTDA+     G    GVVI
Sbjct: 798  LAAEYHNTTSGSSTQHNSSKGRIGDKKRITWRPPPQDRLKVNTDAAFQKDTGKAASGVVI 857

Query: 668  RTHNGE-ITHTMSKKLVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHR 844
            R   G+ IT T +K        + AEA A +E L L K+++    +IE+DC Q+VQA  +
Sbjct: 858  RNWQGKFITGTTTKFTTTS--AIAAEAQAYREALILIKNLQIENCIIETDCLQLVQAV-K 914

Query: 845  TEVNLTYLGSIIEDLRELAADFPNFSMRYIPRTANVLAHHMASFA 979
                +    +I+ D+ +L  + P     + PR  N +AH +A+ A
Sbjct: 915  ARTPIAEADAILRDILQLLEEAPTVGATWTPREGNTVAHQLAAMA 959


>ref|XP_010675428.1| PREDICTED: uncharacterized protein LOC104891430 [Beta vulgaris subsp.
            vulgaris]
          Length = 315

 Score =  139 bits (351), Expect = 6e-35
 Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 2/289 (0%)
 Frame = +2

Query: 170  HGILPVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRLPDALLTTP 349
            HG L VRA L  + C  D IC  CG+A ET  HTL  C  + + W+ASPLR+   ++   
Sbjct: 19   HG-LAVRANLKVRGCECDQICPVCGEADETTLHTLVMCHEARWMWKASPLRIDPMVMMGG 77

Query: 350  ATMTDMIQAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNK--DLTHQDCFALALKCLND 523
            +      Q ++   DD    +F + LW +W  RN   F  K  D+T +    +A      
Sbjct: 78   SFKGWCDQFVNAAMDDRWWDIFWLTLWHIWLRRNRWVFDGKKSDITEETGRIMAGLEEFS 137

Query: 524  YQSTQKKQPPMHSQNTHTSWQRPPEGTIKINTDASITSLDGTGIGVVIRTHNGEITHTMS 703
                 +K+  + + N    W+ P   +IK NTDA++ +    G G V+R  +G++   M 
Sbjct: 138  MAREMRKEATLVAANVEEKWKPPGGSSIKFNTDAAVFADGSIGCGGVMRNSDGDVLGAMC 197

Query: 704  KKLVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHRTEVNLTYLGSIIE 883
            + +V  F + VAEA A +  L  A  +  + +++ESD  ++V    R  +  +  G ++ 
Sbjct: 198  ESVVGSFDIDVAEAYAARSALRCALDMGRDNIILESDSSKLVSHLQRAHIENSGFGGVVA 257

Query: 884  DLRELAADFPNFSMRYIPRTANVLAHHMASFAFSVSCNGLYFGSFPHEL 1030
            D+  L++    FS +++ R  N +AH +A  + S+    ++ G FP E+
Sbjct: 258  DILHLSSRCIFFSCKHVKRGGNRVAHKLAHLSKSLLVKKVWMGDFPREI 306


>gb|PNX96793.1| ribonuclease H, partial [Trifolium pratense]
          Length = 463

 Score =  142 bits (358), Expect = 9e-35
 Identities = 99/337 (29%), Positives = 155/337 (45%), Gaps = 11/337 (3%)
 Frame = +2

Query: 2    TTFGQYSVKSGYKLALTMXXXXXXXXXXXXXXXXXXXXXXXX-NIPPKVQIFVWKIIHGI 178
            T  G YSVKSGY   +                            +PPK    +W+I++  
Sbjct: 105  TKDGIYSVKSGYHAIIDWDSNSNTNNAASSNRPMEIWKTLWKFKVPPKYSHLLWRILNNA 164

Query: 179  LPVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRLPDALLTTPATM 358
            +PV+  L +K    DP+C RC + +E+ +H   EC W+   W ASPL L +  L      
Sbjct: 165  IPVKGNLFKKGVKCDPLCPRCLNHVESIQHVFLECEWAKKVWFASPLTL-NLNLNQLTDF 223

Query: 359  TDMIQAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNKDLTHQDCFALALKCLNDYQS-- 532
             D    ++   D         +++ +W  RN+L FQ K+L  Q+  + A K L++YQS  
Sbjct: 224  YDWFTFVTNNTDKDCMEKILAIIYEIWNVRNLLVFQEKNLPPQEISSNAFKKLHEYQSHG 283

Query: 533  ---TQKKQ---PPMHSQNTHTSWQRPPEGTIKINTDASITSLDGTGIGVVIRTHNGEITH 694
               TQK Q   P  +S + + SW  P  GT+KIN DA ++S      G+V+R  +G    
Sbjct: 284  EVKTQKSQTSPPSTNSCSNNISWSPPLRGTLKINVDAHLSSDGHWFAGMVLRRSDGSAVG 343

Query: 695  TMSKKLVHK--FPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHRTEVNLTYL 868
              ++  VHK    VV+ EA+   + +   + +  + V+ E D Q +V A    E      
Sbjct: 344  AATR--VHKGMTDVVMGEAMGLNDAIDWIEKMEKHQVVFEMDSQIIVNAVRNREEIRKNW 401

Query: 869  GSIIEDLRELAADFPNFSMRYIPRTANVLAHHMASFA 979
            GS++        D PN  + ++ R AN +AH +A +A
Sbjct: 402  GSVVRRCIRFLKDNPNSDLVWVNRKANRVAHEIAKWA 438


>gb|PRQ45142.1| putative ribonuclease H-like domain, reverse transcriptase
            zinc-binding domain-containing protein [Rosa chinensis]
          Length = 358

 Score =  140 bits (352), Expect = 1e-34
 Identities = 86/300 (28%), Positives = 142/300 (47%), Gaps = 2/300 (0%)
 Frame = +2

Query: 128  NIPPKVQIFVWKIIHGILPVRAAL-SRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFW 304
            N+PPK+++ VW+++HGI+P R AL SR   + D  C  C    E+  H  +EC     FW
Sbjct: 27   NVPPKIKVLVWRLVHGIVPTRLALLSRHLHIQDVACVFCKSTNESSLHVFKECDALQCFW 86

Query: 305  RASPLRLPDALLTTPATMTDMIQAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNKDLTH 484
            R  PL+L  A       + + +  + +M + +    F M LW +W  RN + + +     
Sbjct: 87   RLGPLKLK-AKEQAAGDLKNWLFDVLDMLNSNQVDFFFMALWSVWTERNKIVWNDGCFQP 145

Query: 485  QDCFALALKCLNDYQSTQKKQPPMHSQNTHTSWQRPPEGTIKINTDASITSLDGTG-IGV 661
                      L ++Q   +K      +   T WQ PP G +KIN D +     G G IGV
Sbjct: 146  MHMIQWCTSSLEEFQKYHQKVA-CKKKRPLTKWQCPPRGRLKINIDGAFQVDSGVGGIGV 204

Query: 662  VIRTHNGEITHTMSKKLVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFH 841
            V+R   G     +++  +H    +  EA AC+ GL L      + V+IESD   ++ A  
Sbjct: 205  VVRDDLGTGIAAIARPFLHAHSAINMEAEACRAGLLLGIHQGWSDVVIESDSALLIAALK 264

Query: 842  RTEVNLTYLGSIIEDLRELAADFPNFSMRYIPRTANVLAHHMASFAFSVSCNGLYFGSFP 1021
              E N + +  + +D ++  + F +  +R+I R AN +AH +A  A  +  + ++    P
Sbjct: 265  SEEDNFSEVSRVFDDCKDYLSAFQSVEIRHIYREANGVAHRLAHLASYLLLDDIWLDETP 324


>ref|XP_015385487.1| PREDICTED: uncharacterized protein LOC107176882 [Citrus sinensis]
          Length = 300

 Score =  138 bits (348), Expect = 1e-34
 Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 5/301 (1%)
 Frame = +2

Query: 155  VWKIIHGILPVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRLPDA 334
            +W+    +LP    L ++KC+ DPIC+RC  +IET  H L EC  +   W  +PL+    
Sbjct: 1    MWRASKNLLPTAENLWKRKCLQDPICKRCCRSIETTYHALLECKATKKIWTYAPLQSNFQ 60

Query: 335  LLTTPATMTDMIQAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNKDLTHQDCFALALKC 514
                 + ++ +    S M       L + L WV WYARN   F+ K +  +   A A   
Sbjct: 61   NSPNQSILSIIQNMPSNMRKSEFELLIS-LCWVAWYARNKFIFEGKKINPRFSTAKAEVV 119

Query: 515  LNDYQSTQKKQPPMHSQNTHT----SWQRPPEGTIKINTDASITSLDG-TGIGVVIRTHN 679
            ++ +Q   +K    H  N+       W  P +   K+N DA+I S     G+G VIR   
Sbjct: 120  IDAFQRA-RKHGATHIHNSSNVLQHKWNPPLKNVFKVNVDATINSKSQMAGLGAVIRDSE 178

Query: 680  GEITHTMSKKLVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHRTEVNL 859
             ++      +   K  V  AEA   + GL L +      ++IESDC ++++  + T+ N 
Sbjct: 179  NKVVAAGIMQTGLKEHVSYAEAETIEWGLKLGRRAALPTLIIESDCLEVIELVNNTKNNK 238

Query: 860  TYLGSIIEDLRELAADFPNFSMRYIPRTANVLAHHMASFAFSVSCNGLYFGSFPHELVHF 1039
            T L  IIE+++   ++F N  + +IPRT NV AH +A  A   +   ++  + P ++++ 
Sbjct: 239  TGLWWIIEEIQNQKSEFCNVIVNHIPRTCNVYAHSLAKLAVGANTPAVWLDNIPAKVMNV 298

Query: 1040 I 1042
            +
Sbjct: 299  L 299


>gb|PNX58727.1| ribonuclease H [Trifolium pratense]
          Length = 330

 Score =  139 bits (350), Expect = 1e-34
 Identities = 90/314 (28%), Positives = 152/314 (48%), Gaps = 10/314 (3%)
 Frame = +2

Query: 131  IPPKVQIFVWKIIHGILPVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRA 310
            IPPK Q  +W+++H  LPV   L +K  + +P+C RC   IE   H  ++C W+   W A
Sbjct: 15   IPPKYQHLIWRLLHNALPVTDNLQKKGIMCNPLCPRCNAKIEDINHVFKDCIWAQQVWFA 74

Query: 311  SPLRLPDALLTTPATMTDMI-QAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNKDLTHQ 487
            SPL +    L T  +  D I  + S    D++  L + + + +W ARN+L FQ KD+   
Sbjct: 75   SPLNINFEKLRT--SFIDWIHDSFSHNQSDTVE-LISSICYHIWKARNLLVFQQKDIPVL 131

Query: 488  DCFALALKCLNDYQSTQKK-----QPPMHSQNTHTSWQRPPEGTIKINTDASITSLDGTG 652
            +    A   L +Y+  Q+K     +P     +   +W  PP  T+KIN DA   S    G
Sbjct: 132  EILEQACANLREYKQLQQKDSTKARPKTRQSSNDLNWSPPPANTLKINVDAHFHSDGHWG 191

Query: 653  IGVVIRTHNGEITHTMSKKLVHKFPVVVAEAIACKEGLTLAKSIRAN----AVMIESDCQ 820
            +G ++R  +G      ++ +  + P + AEA+     +    +++      A+++E D +
Sbjct: 192  LGWIVRKRDGSCLGAATRVVRARTP-IEAEALGLIGVMQYIDNLQNQHQDMAIIVEMDAK 250

Query: 821  QMVQAFHRTEVNLTYLGSIIEDLRELAADFPNFSMRYIPRTANVLAHHMASFAFSVSCNG 1000
             +V A         Y G I +   E  ++ PN S+ +I R  N +AH++A +A  V  N 
Sbjct: 251  MVVDAVKTKHYPRVYWGKIAQKGGEWLSNHPNVSVNWIGRVGNRVAHNLAKWAL-VEPNK 309

Query: 1001 LYFGSFPHELVHFI 1042
             +  + P ++  FI
Sbjct: 310  NWLSNVPPQIALFI 323


>gb|PRQ55763.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1228

 Score =  145 bits (366), Expect = 1e-34
 Identities = 98/341 (28%), Positives = 153/341 (44%), Gaps = 4/341 (1%)
 Frame = +2

Query: 11   GQYSVKSGYKLALTMXXXXXXXXXXXXXXXXXXXXXXXX---NIPPKVQIFVWKIIHGIL 181
            G Y VKSGY +A  +                            IPPKV++F+W+++ GIL
Sbjct: 862  GMYDVKSGYHIARIVDGATERASCSTGPVGLNGKYWKLVWHARIPPKVRMFIWRLLKGIL 921

Query: 182  PVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRLPDALLTTPATMT 361
            P +  L +K  +PD  C  C  A E   H  R+C + + FW    L L   +    A++ 
Sbjct: 922  PTKHELCKKVALPDFECVFCHGAGEHGLHLFRDCSYIACFWALGELDLK-VVDVMAASLE 980

Query: 362  DMIQAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNKDLTHQDCFALALKCLNDYQSTQK 541
            + ++ + ++  +    LF + LWV+W  RN L +        +    A K L +YQ    
Sbjct: 981  EWVKNVIDVITEHHRNLFFVYLWVIWSERNNLVWNGSVFNAYNAAQWASKFLGEYQQVHP 1040

Query: 542  KQPPMHSQNTHTSWQRPPEGTIKINTDASITSLDGTG-IGVVIRTHNGEITHTMSKKLVH 718
             +    S  T   W+ PP G +KIN D S     G G IGVVIR   G     M++   +
Sbjct: 1041 TRQKK-SGRTRAKWENPPTGRLKINIDGSYRPESGDGGIGVVIRDDKGSCMAAMARYFPN 1099

Query: 719  KFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHRTEVNLTYLGSIIEDLREL 898
                   EA AC+ GL LA     +  ++ESDC  MV A ++   + + +G II+D +  
Sbjct: 1100 VLSAFHMEAEACRAGLLLAIYQEWDEFILESDCSLMVAALNQNLEDRSEVGRIIDDCKSY 1159

Query: 899  AADFPNFSMRYIPRTANVLAHHMASFAFSVSCNGLYFGSFP 1021
                 +  + ++ R AN +A+ +A  A S   N ++    P
Sbjct: 1160 LTSLHSIKISHVFREANGVANRLAHLARSKFLNDVWLEEAP 1200


>ref|XP_015941361.1| uncharacterized protein LOC107466866 [Arachis duranensis]
          Length = 1315

 Score =  145 bits (366), Expect = 1e-34
 Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 18/367 (4%)
 Frame = +2

Query: 2    TTFGQYSVKSGYKLAL----TMXXXXXXXXXXXXXXXXXXXXXXXXNIPPKVQIFVWKII 169
            T  G Y+VKSGY+ A                                +P K+ +F+WK +
Sbjct: 849  TAEGHYTVKSGYRAAKEEKDAKEEIKLNEASSSQNHREIWGTIWGLPVPQKIIMFLWKAV 908

Query: 170  HGILPVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRL-PDALLTT 346
             GILPV + L +++C   P C  C D  ET EH L  CPW+   W  S +++ P A   T
Sbjct: 909  EGILPVNSNLYKRRCAVKPSCSICQDENETVEHALLLCPWTRAVWFGSSIQITPTAYNVT 968

Query: 347  P--ATMTDMIQAI-SEMGDDS--LHCLFAMLLWVLWYARNMLTFQNKDLTHQDCFALALK 511
                 + D +Q I  E G D   + C    + W +W  RN   FQ   +  +     A +
Sbjct: 969  SFGRWIWDTVQKIRRETGKDQERVLCNLGCVCWYIWKTRNQYIFQQATINPKQAIINAKQ 1028

Query: 512  CLNDYQSTQKKQPPMHSQN-------THTSWQRPPEGTIKINTDASITSLDG-TGIGVVI 667
               +Y +T       H+ +          +W+ PP+  +K+NTDA+     G     VVI
Sbjct: 1029 LAEEYHNTTSGSSTQHNSSKGRIGDRKRITWRPPPQDRLKVNTDAAFQKDTGKAASAVVI 1088

Query: 668  RTHNGEITHTMSKKLVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHRT 847
            R   G+I    + K       + AEA A +E L L K+++    +IE+DC  +VQA  + 
Sbjct: 1089 RNWQGKIITGTTTKFT-TTSALAAEAHAYREALILIKNLQIENCIIETDCLPLVQAV-KA 1146

Query: 848  EVNLTYLGSIIEDLRELAADFPNFSMRYIPRTANVLAHHMASFAFSVSCNGLYFGSFPHE 1027
               +    +I+ D+ +L  + P     + PR  N++AH +A+ A        +  + P+ 
Sbjct: 1147 RTPIAEANAILRDILQLLEEAPTVGATWTPREGNIVAHQLAAMAMGNVLTSQWTFNIPNP 1206

Query: 1028 LVHFIPS 1048
            + H  P+
Sbjct: 1207 VGHSSPT 1213


>ref|XP_016173438.1| uncharacterized protein LOC107615941 [Arachis ipaensis]
          Length = 1491

 Score =  145 bits (366), Expect = 1e-34
 Identities = 97/345 (28%), Positives = 153/345 (44%), Gaps = 19/345 (5%)
 Frame = +2

Query: 2    TTFGQYSVKSGYKLAL----TMXXXXXXXXXXXXXXXXXXXXXXXXNIPPKVQIFVWKII 169
            T  G Y+VKSGY+ A                                +P K+++F+WK +
Sbjct: 880  TAEGHYTVKSGYRAAKEEKDAKEEEKLNEASSSQNHREIWGTIWRLPVPQKIRMFLWKAV 939

Query: 170  HGILPVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRLPDALLTTP 349
             GILPV + L +++C   P C  C D  ET EH L  CPW+   W  S +++        
Sbjct: 940  EGILPVNSNLYKRRCAVKPSCSICQDENETVEHALLLCPWTRAVWFGSSIQITPTAYNVA 999

Query: 350  A---TMTDMIQAI-SEMGDDS--LHCLFAMLLWVLWYARNMLTFQNKDLTHQDCFALALK 511
            +    + D +Q I  E G D   + C    + W +W  RN   FQ   +  +     A +
Sbjct: 1000 SFGRWIWDTVQKIRRETGKDQERILCKLGCVCWYIWKTRNQYIFQQATINPKQAIINAEQ 1059

Query: 512  CLNDYQSTQKKQPPMHSQN-------THTSWQRPPEGTIKINTDASITSLDG-TGIGVVI 667
               +Y +T       H+ +          +W+ PP+  +K+NTDA+     G    GVVI
Sbjct: 1060 LAAEYHNTTSGSSTQHNSSKGRIGDKKRVTWRPPPQDRLKVNTDAAFQKDTGKAASGVVI 1119

Query: 668  RTHNGE-ITHTMSKKLVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHR 844
            R   G+ IT T +K          AEA A +E L L K+++    +IE+DC Q+VQ   +
Sbjct: 1120 RNWQGKFITGTTTKFTTTS--ATAAEAQAYREALILIKNLQIENCIIETDCLQLVQVV-K 1176

Query: 845  TEVNLTYLGSIIEDLRELAADFPNFSMRYIPRTANVLAHHMASFA 979
                +    +I+ D+ +L  + P     + PR  N++AH +A+ A
Sbjct: 1177 ARTPIVEADAILRDILQLLEEAPTVGATWTPREGNIVAHQLAAMA 1221


>gb|PNX98065.1| ribonuclease H [Trifolium pratense]
          Length = 1011

 Score =  144 bits (363), Expect = 3e-34
 Identities = 98/334 (29%), Positives = 160/334 (47%), Gaps = 8/334 (2%)
 Frame = +2

Query: 2    TTFGQYSVKSGYKLALTMXXXXXXXXXXXXXXXXXXXXXXXX-NIPPKVQIFVWKIIHGI 178
            T  G YSVKSGY+  +                           N+PPK   F+W+ +   
Sbjct: 651  TRDGHYSVKSGYQAIMEWAKNSDNNNATSSNSSMEIWKVLWKLNVPPKHSHFIWRCLSNA 710

Query: 179  LPVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRLPDALLTTPATM 358
            +PV+  L +K    DP+C RC + +ET +H   EC W+   W ASPL L +         
Sbjct: 711  IPVKGKLFKKGIRCDPLCPRCLNHVETIQHVFLECDWAKKVWFASPLTL-NLNSNQLTEF 769

Query: 359  TDMIQAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNKDLTHQDCFALALKCLNDYQSTQ 538
             D    +    D         + + +W  RN+L FQNKDL  Q+  A ALK L++++S +
Sbjct: 770  YDWFNYMIINTDKECMEKIVAITYEIWNTRNLLVFQNKDLPPQEISANALKRLHEFKSFE 829

Query: 539  KKQPPMH-----SQNTHTSWQRPPEGTIKINTDASITSLDGTGI-GVVIRTHNGEITHTM 700
            +++ P+      S   +TSW  P  G +K N DA ++S DG  + G+V+R  +G    + 
Sbjct: 830  EQRTPIQKPSHKSCRNNTSWSPPLRGCLKANVDAHLSS-DGRWLSGLVLRREDGSAVGSA 888

Query: 701  SKKLVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFH-RTEVNLTYLGSI 877
            ++        V+ EA+A  + +        + V++E+D Q +V+A   R  +   + G I
Sbjct: 889  TRMHKGSGEAVLGEALALNDAMEWVAKFINHQVVLETDSQTIVKAIKGRMRIRKDW-GWI 947

Query: 878  IEDLRELAADFPNFSMRYIPRTANVLAHHMASFA 979
            ++       + PN  +R++PR+AN +AH MA +A
Sbjct: 948  VQRSIIFLEENPNADIRWVPRSANRVAHEMAKWA 981


>ref|XP_015385738.1| PREDICTED: uncharacterized protein LOC107177034 [Citrus sinensis]
          Length = 303

 Score =  137 bits (345), Expect = 3e-34
 Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 6/306 (1%)
 Frame = +2

Query: 155  VWKIIHGILPVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRLPDA 334
            +W+  H +LP    L R++ + +P C+ C    ET  HTL  C  +   WR +P      
Sbjct: 1    MWRASHNLLPTADNLWRREILLEPTCQICKQGKETTAHTLLLCKAAKKVWRYAPFETCFL 60

Query: 335  LLTTPATMTDMIQAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNKDLTHQDCFALALKC 514
                   +  M++   ++    +  + A + W +WY RN   F+ K +      + A   
Sbjct: 61   DAVNQDMLEIMVEMAKKLTKSDIEVMVA-ICWTIWYGRNKFLFEGKKMEPLLTISRAEAV 119

Query: 515  LNDYQSTQKKQPPMHSQNTHTS-----WQRPPEGTIKINTDASIT-SLDGTGIGVVIRTH 676
            +  Y+    KQP +  +  ++S     W  PP+ T K+N DA++       G+GVVIR  
Sbjct: 120  VEAYRRV--KQPTLDPEAKYSSKNQQVWSPPPDNTFKVNVDAAVNFDRQKAGLGVVIRDS 177

Query: 677  NGEITHTMSKKLVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHRTEVN 856
            + ++     K  +    V  AEA A + GL +AKS     +M+ESDCQ++V+  +  E +
Sbjct: 178  SNKVKVAAVKSTLFTGDVQTAEAEAVEWGLVVAKSAAFQCIMVESDCQEVVKLINNNEGS 237

Query: 857  LTYLGSIIEDLRELAADFPNFSMRYIPRTANVLAHHMASFAFSVSCNGLYFGSFPHELVH 1036
             T +  +I +++ L+ DF N S  + PR+ N  AH +A  A   +   ++    P E+  
Sbjct: 238  RTEIMWVISEIQSLSKDFQNISYYHTPRSCNTHAHSLAKLALRNNETVVWLEPIPVEVES 297

Query: 1037 FIPSFL 1054
             + S +
Sbjct: 298  VLSSLI 303


>gb|PNX61540.1| ribonuclease H, partial [Trifolium pratense]
          Length = 291

 Score =  136 bits (342), Expect = 7e-34
 Identities = 78/279 (27%), Positives = 135/279 (48%), Gaps = 5/279 (1%)
 Frame = +2

Query: 128 NIPPKVQIFVWKIIHGILPVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWR 307
           N+PPK    +W+ +   +PV+ +L ++    DP+C RC D +ET +H   +C W+   W 
Sbjct: 11  NVPPKHSHLIWRSLRNAIPVKGSLFKRGIRCDPLCPRCLDHVETIQHVFMDCEWTKKVWF 70

Query: 308 ASPLRLPDALLTTPATMTDMIQAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNKDLTHQ 487
           ASPL L +  L       D I  +    D         +++ +W ARN   FQ KDL  Q
Sbjct: 71  ASPLTL-NLNLNYLTEFYDWITYMINNTDKECMEKIVAIIYEIWNARNQXXFQEKDLPPQ 129

Query: 488 DCFALALKCLNDYQSTQKKQPPMHSQ-----NTHTSWQRPPEGTIKINTDASITSLDGTG 652
           +  A+A + L++YQ+  +KQ P  +      + +T W  P    +K N DA ++S     
Sbjct: 130 EISAIAFRRLHEYQTYGEKQIPFQNPVAKGCSNNTRWSPPLRDILKANVDAHLSSDGHWF 189

Query: 653 IGVVIRTHNGEITHTMSKKLVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQ 832
            G+V+R  +G I    ++       +++ EA+   + L   + I  + V++E D Q +V+
Sbjct: 190 SGMVLRRSDGSIVGAATRSHKGSSEILMGEALGLNDALDWLEKIDEHQVILEMDSQTIVK 249

Query: 833 AFHRTEVNLTYLGSIIEDLRELAADFPNFSMRYIPRTAN 949
           A     +     G ++        + PN  +R++PR+AN
Sbjct: 250 AIKEKAIVRKNWGRVVRRCIVFLGENPNADIRWVPRSAN 288


>gb|PNY07715.1| ribonuclease H [Trifolium pratense]
          Length = 1567

 Score =  142 bits (359), Expect = 1e-33
 Identities = 96/356 (26%), Positives = 160/356 (44%), Gaps = 11/356 (3%)
 Frame = +2

Query: 2    TTFGQYSVKSGYKLALTMXXXXXXXXXXXXXXXXXXXXXXXXNI--PPKVQIFVWKIIHG 175
            T  G Y+VKSGY   +                          NI  PPK    +W+I+H 
Sbjct: 1189 TKDGNYTVKSGYNAQMEWANVESSQAQTSNNHKDEPFWNKIWNIKVPPKQIHLLWRIMHN 1248

Query: 176  ILPVRAALSRKKCVPDPICRRCGDAIETPEHTLRECPWSSFFWRASPLRLPDALLTTPAT 355
             +PV+  L +K  + D +C RC    ET +H    C W+   W  SPL +    +     
Sbjct: 1249 AIPVKTNLIKKGILIDSLCPRCNKGPETIDHLFLHCEWAHLVWFYSPLTIKTTNIQLHTF 1308

Query: 356  MTDMIQAISEMGDDSLHCLFAMLLWVLWYARNMLTFQNKDLTHQDCFALALKCLNDYQS- 532
               +   +     +S+  L + + + +W+ARN   FQNKD+   +    ALK ++D+Q  
Sbjct: 1309 HEWIKYMLHNTTKESMQIL-SSITYSIWFARNKKVFQNKDIPVNETVDRALKNIHDFQHH 1367

Query: 533  --------TQKKQPPMHSQNTHTSWQRPPEGTIKINTDASITSLDGTGIGVVIRTHNGEI 688
                    T  K P ++  NT  SW  PP   +K+N DA ++     G+G V+R  +G  
Sbjct: 1368 LTEACFAPTNSKPPSVNRHNT--SWNPPPRNFLKLNVDAHLSDDGHWGLGWVLRGVDGRC 1425

Query: 689  THTMSKKLVHKFPVVVAEAIACKEGLTLAKSIRANAVMIESDCQQMVQAFHRTEVNLTYL 868
               ++K L     V +AEA   +E LT  ++   N V+ E D + +V A  + +   T  
Sbjct: 1426 VGAVTKVLKGSDDVAMAEATGLREALTWVETQHLNNVIFELDAEIIVTALKKKDYARTQW 1485

Query: 869  GSIIEDLRELAADFPNFSMRYIPRTANVLAHHMASFAFSVSCNGLYFGSFPHELVH 1036
            G I++    +  +  +FS+ ++ R  N  AH +A +A  +  N  +  +FP  +++
Sbjct: 1486 GQIVKHCARVLDNNDSFSISWVKREGNSAAHVLARWAL-IEPNRYWPNNFPVSIMN 1540