BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00013135
         (1081 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN01503.1| RNA pseudouridylate synthase [Handroanthus impeti...   506   e-176
ref|XP_020551021.1| RNA pseudouridine synthase 2, chloroplastic ...   488   e-171
ref|XP_012829598.1| PREDICTED: RNA pseudouridine synthase 2, chl...   483   e-167
gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Erythra...   483   e-167
ref|XP_022855454.1| RNA pseudouridine synthase 2, chloroplastic ...   429   e-146
ref|XP_022855453.1| RNA pseudouridine synthase 2, chloroplastic ...   429   e-146
ref|XP_022855456.1| RNA pseudouridine synthase 2, chloroplastic ...   420   e-144
ref|XP_009798870.1| PREDICTED: RNA pseudouridine synthase 2, chl...   387   e-129
ref|XP_016492071.1| PREDICTED: RNA pseudouridine synthase 2, chl...   386   e-129
ref|XP_010320444.1| PREDICTED: RNA pseudouridine synthase 2, chl...   384   e-128
ref|XP_010320443.1| PREDICTED: RNA pseudouridine synthase 2, chl...   384   e-128
ref|XP_004238386.1| PREDICTED: RNA pseudouridine synthase 2, chl...   384   e-128
ref|XP_019072097.1| PREDICTED: RNA pseudouridine synthase 2, chl...   379   e-127
ref|XP_009620048.1| PREDICTED: RNA pseudouridine synthase 2, chl...   382   e-127
ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl...   382   e-127
ref|XP_016493442.1| PREDICTED: RNA pseudouridine synthase 2, chl...   381   e-127
ref|XP_015073900.1| PREDICTED: RNA pseudouridine synthase 2, chl...   380   e-127
ref|XP_015073899.1| PREDICTED: RNA pseudouridine synthase 2, chl...   380   e-127
gb|OIT03965.1| rna uridine synthase 2, chloroplastic [Nicotiana ...   380   e-127
ref|XP_019244907.1| PREDICTED: RNA pseudouridine synthase 2, chl...   380   e-126

>gb|PIN01503.1| RNA pseudouridylate synthase [Handroanthus impetiginosus]
          Length = 463

 Score =  506 bits (1303), Expect = e-176
 Identities = 261/337 (77%), Positives = 283/337 (83%)
 Frame = -3

Query: 1013 LPQYSIHKKRTYFRIALKMLSPQSLSWHSVKPLSISLRNPSLQKLISTARAYSTSISAAN 834
            LPQ  I ++   FR A KMLS +SL W   KP   + RN SL+KLI+TA A S S  AA 
Sbjct: 15   LPQ--IQRRIFLFRKAPKMLSFRSLCWSPAKPHFTNPRNRSLRKLITTACACSNSTPAAQ 72

Query: 833  SDSDDFQNPVSGRPNNFSGFKIEETVELDSRKLRLDSWLSSRINGISRARVQSSIRSGLV 654
            S S DFQ+   GRPNN+SG+KIEETV+LDS KLRLDSW+SSRI GISRARVQSSIRSGLV
Sbjct: 73   SISHDFQDSFPGRPNNYSGYKIEETVKLDSGKLRLDSWISSRITGISRARVQSSIRSGLV 132

Query: 653  SVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVH 474
            SVNGH I+KVSHVVRDGD+VNC IAELQPL A+PEDIPLDIVYEDEHVLVVNKPAHMVVH
Sbjct: 133  SVNGHTISKVSHVVRDGDIVNCTIAELQPLSAKPEDIPLDIVYEDEHVLVVNKPAHMVVH 192

Query: 473  PAPGNATGTLVNGILNHCRLSTVFLSPEALPETDDDSGDEASAFSVDQGHTVDIGFGFSE 294
            PAPGN TGTLVNGIL HCRLST + +PEALP  DDDSGDE + FSVDQGH    GFG  E
Sbjct: 193  PAPGNGTGTLVNGILRHCRLSTAYFNPEALPGIDDDSGDEVNTFSVDQGHIGGTGFGLCE 252

Query: 293  ASVRPGIVHRLDKGTSGLLVVAKDEHSHSHLAEQFKKHTIKRVYVSLTCGVPSPLSGRID 114
            A VRPGIVHRLDKGTSGLLVVAKDEHSHS+LAEQFKKHT+KRVYVSLTCGVPSP+SGRID
Sbjct: 253  ALVRPGIVHRLDKGTSGLLVVAKDEHSHSNLAEQFKKHTVKRVYVSLTCGVPSPVSGRID 312

Query: 113  VPIGRDPGNRIRMIANPGSATCGKARHAVSRYKVIEI 3
            +PIGRD  NRIRMIA PGS + GKARHAVSRYKVIEI
Sbjct: 313  IPIGRDANNRIRMIATPGSTSRGKARHAVSRYKVIEI 349


>ref|XP_020551021.1| RNA pseudouridine synthase 2, chloroplastic isoform X3 [Sesamum
           indicum]
          Length = 314

 Score =  488 bits (1255), Expect = e-171
 Identities = 256/314 (81%), Positives = 272/314 (86%), Gaps = 1/314 (0%)
 Frame = -3

Query: 959 MLSPQSLSWHSVKPLSISLRNPSLQKLISTARAYSTSISAANSDSDDFQNPVSGRPNNFS 780
           MLS  SL  +S KPL I+ RN SL+K+ISTA AYS S +AANS+SDDFQ P SGRPNN+S
Sbjct: 1   MLSLHSLYLNSAKPLPINPRNLSLRKIISTACAYSKSYAAANSESDDFQGPFSGRPNNYS 60

Query: 779 GFKIEETVELDSRKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGD 600
           G KIEE VELDS KLRLDSW+SSRINGISRARVQSSIRSGLVSVNGH+I+KVSHVVRDGD
Sbjct: 61  GVKIEEKVELDSGKLRLDSWISSRINGISRARVQSSIRSGLVSVNGHVIDKVSHVVRDGD 120

Query: 599 VVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPA-HMVVHPAPGNATGTLVNGILNH 423
           VVNC IAELQPLRAE EDIPLDIVYEDEHVLVVNKP    VVHPAPGNA+GTLVNGIL H
Sbjct: 121 VVNCTIAELQPLRAEAEDIPLDIVYEDEHVLVVNKPVLQQVVHPAPGNASGTLVNGILRH 180

Query: 422 CRLSTVFLSPEALPETDDDSGDEASAFSVDQGHTVDIGFGFSEASVRPGIVHRLDKGTSG 243
           CRLSTV L+PEA PE  DDS DE SAFSVDQG  V IG G  E+SVRPGIVHRLDKGTSG
Sbjct: 181 CRLSTVCLNPEAQPEIVDDSEDEVSAFSVDQGENVGIGSGLYESSVRPGIVHRLDKGTSG 240

Query: 242 LLVVAKDEHSHSHLAEQFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRIRMIANP 63
           LLVVAKDEHSH+ LAEQFK+ TIKRVYVSLTCGVPSP +GRIDVPIGRD  NRIRMIA P
Sbjct: 241 LLVVAKDEHSHACLAEQFKERTIKRVYVSLTCGVPSPATGRIDVPIGRDANNRIRMIAIP 300

Query: 62  GSATCGKARHAVSR 21
           GSAT GKARHAVSR
Sbjct: 301 GSATHGKARHAVSR 314


>ref|XP_012829598.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Erythranthe guttata]
 gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Erythranthe guttata]
          Length = 422

 Score =  483 bits (1243), Expect = e-167
 Identities = 246/321 (76%), Positives = 274/321 (85%), Gaps = 2/321 (0%)
 Frame = -3

Query: 959 MLSPQSLSWHSVKPLSISLRNPSLQKLISTARAYSTSISAANSDSDDFQNPVSGRPNNFS 780
           MLS QSL+W S+KP  I+ RNP+  +L+ST+ AY  SI A  SDSDD Q+ +SGRPNNFS
Sbjct: 1   MLSLQSLNWSSIKPFPINPRNPAFWRLLSTSSAYPDSIPADYSDSDDSQDSISGRPNNFS 60

Query: 779 GFKIEETVELDSRKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGD 600
           G KIEETV LDS KLR+DSW+SSRINGISRARVQSSIRSGLVSVNGH+I+KVSHVVRDGD
Sbjct: 61  GHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISKVSHVVRDGD 120

Query: 599 VVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHC 420
            VNC IAELQPLRAEPE+IPLDIVYED+H+LVVNKPAHMVVHPAPGNA GTLVNGIL+HC
Sbjct: 121 SVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNGILHHC 180

Query: 419 RLSTVFLSPEALPET--DDDSGDEASAFSVDQGHTVDIGFGFSEASVRPGIVHRLDKGTS 246
           RLSTV  +PE+LP+   DDDS DEA+ F              SE+SVRPGIVHRLDKGTS
Sbjct: 181 RLSTVCFNPESLPDNIDDDDSIDEATVFP-------------SESSVRPGIVHRLDKGTS 227

Query: 245 GLLVVAKDEHSHSHLAEQFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRIRMIAN 66
           GLLVVAKDEHSHSHLAEQFKKHT+KRVYVSLTCGVPSP+SGR+D+PIGRD  NRIRM+A 
Sbjct: 228 GLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIPIGRDSNNRIRMVAI 287

Query: 65  PGSATCGKARHAVSRYKVIEI 3
           PGSA  GKARHAVSRYKV+EI
Sbjct: 288 PGSALHGKARHAVSRYKVVEI 308


>gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Erythranthe guttata]
          Length = 432

 Score =  483 bits (1243), Expect = e-167
 Identities = 246/321 (76%), Positives = 274/321 (85%), Gaps = 2/321 (0%)
 Frame = -3

Query: 959 MLSPQSLSWHSVKPLSISLRNPSLQKLISTARAYSTSISAANSDSDDFQNPVSGRPNNFS 780
           MLS QSL+W S+KP  I+ RNP+  +L+ST+ AY  SI A  SDSDD Q+ +SGRPNNFS
Sbjct: 1   MLSLQSLNWSSIKPFPINPRNPAFWRLLSTSSAYPDSIPADYSDSDDSQDSISGRPNNFS 60

Query: 779 GFKIEETVELDSRKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGD 600
           G KIEETV LDS KLR+DSW+SSRINGISRARVQSSIRSGLVSVNGH+I+KVSHVVRDGD
Sbjct: 61  GHKIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISKVSHVVRDGD 120

Query: 599 VVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHC 420
            VNC IAELQPLRAEPE+IPLDIVYED+H+LVVNKPAHMVVHPAPGNA GTLVNGIL+HC
Sbjct: 121 SVNCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNGILHHC 180

Query: 419 RLSTVFLSPEALPET--DDDSGDEASAFSVDQGHTVDIGFGFSEASVRPGIVHRLDKGTS 246
           RLSTV  +PE+LP+   DDDS DEA+ F              SE+SVRPGIVHRLDKGTS
Sbjct: 181 RLSTVCFNPESLPDNIDDDDSIDEATVFP-------------SESSVRPGIVHRLDKGTS 227

Query: 245 GLLVVAKDEHSHSHLAEQFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRIRMIAN 66
           GLLVVAKDEHSHSHLAEQFKKHT+KRVYVSLTCGVPSP+SGR+D+PIGRD  NRIRM+A 
Sbjct: 228 GLLVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRVDIPIGRDSNNRIRMVAI 287

Query: 65  PGSATCGKARHAVSRYKVIEI 3
           PGSA  GKARHAVSRYKV+EI
Sbjct: 288 PGSALHGKARHAVSRYKVVEI 308


>ref|XP_022855454.1| RNA pseudouridine synthase 2, chloroplastic isoform X2 [Olea
           europaea var. sylvestris]
          Length = 450

 Score =  429 bits (1104), Expect = e-146
 Identities = 231/326 (70%), Positives = 261/326 (80%), Gaps = 7/326 (2%)
 Frame = -3

Query: 959 MLSPQSLSWHSV---KPLSISLRNPSLQKLISTARAYSTS---ISAANSDSDDFQNPVSG 798
           MLS  +LSW S    K L I+ RN  L ++    RA+ +S    SA N DSDD Q  +S 
Sbjct: 1   MLSLNALSWTSTPSAKALGINPRNSHLSRVHRIIRAFCSSPNSTSAGNLDSDDSQE-LSC 59

Query: 797 RPNNFSGFKIEETVELDSRKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSH 618
           R NNFSG K+EETV LDS KLRLDSW+SSRI+G+SRARVQSSIRSGLVSVNG +I+KVSH
Sbjct: 60  RVNNFSGIKLEETVGLDSGKLRLDSWISSRISGVSRARVQSSIRSGLVSVNGRVISKVSH 119

Query: 617 VVRDGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVN 438
           VVR+GD+VNC I +LQPLRAE EDIPLDIVYED+H+LVVNKPAHMVVHPAPGNATGTLVN
Sbjct: 120 VVREGDMVNCTIEQLQPLRAEAEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNATGTLVN 179

Query: 437 GILNHCRLSTV-FLSPEALPETDDDSGDEASAFSVDQGHTVDIGFGFSEASVRPGIVHRL 261
           GIL+HCRLSTV F +PE L + DD S DE  A S DQ +   I  G  EASVRPGIVHRL
Sbjct: 180 GILHHCRLSTVSFSNPEVLHDADDASDDEFCALSSDQDYNGGISSGLYEASVRPGIVHRL 239

Query: 260 DKGTSGLLVVAKDEHSHSHLAEQFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRI 81
           DKGTSGLLVVAKDE+SH+HLAEQFKKHTIKRVYVS+TCGVPSP  GRI++PIGRD  NR+
Sbjct: 240 DKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSVTCGVPSPTCGRIEIPIGRDLNNRL 299

Query: 80  RMIANPGSATCGKARHAVSRYKVIEI 3
           RMIA PG  T  KAR+A SRY+VIEI
Sbjct: 300 RMIAAPGLNTRQKARYAASRYQVIEI 325


>ref|XP_022855453.1| RNA pseudouridine synthase 2, chloroplastic isoform X1 [Olea
           europaea var. sylvestris]
          Length = 462

 Score =  429 bits (1104), Expect = e-146
 Identities = 231/326 (70%), Positives = 261/326 (80%), Gaps = 7/326 (2%)
 Frame = -3

Query: 959 MLSPQSLSWHSV---KPLSISLRNPSLQKLISTARAYSTS---ISAANSDSDDFQNPVSG 798
           MLS  +LSW S    K L I+ RN  L ++    RA+ +S    SA N DSDD Q  +S 
Sbjct: 1   MLSLNALSWTSTPSAKALGINPRNSHLSRVHRIIRAFCSSPNSTSAGNLDSDDSQE-LSC 59

Query: 797 RPNNFSGFKIEETVELDSRKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSH 618
           R NNFSG K+EETV LDS KLRLDSW+SSRI+G+SRARVQSSIRSGLVSVNG +I+KVSH
Sbjct: 60  RVNNFSGIKLEETVGLDSGKLRLDSWISSRISGVSRARVQSSIRSGLVSVNGRVISKVSH 119

Query: 617 VVRDGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVN 438
           VVR+GD+VNC I +LQPLRAE EDIPLDIVYED+H+LVVNKPAHMVVHPAPGNATGTLVN
Sbjct: 120 VVREGDMVNCTIEQLQPLRAEAEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNATGTLVN 179

Query: 437 GILNHCRLSTV-FLSPEALPETDDDSGDEASAFSVDQGHTVDIGFGFSEASVRPGIVHRL 261
           GIL+HCRLSTV F +PE L + DD S DE  A S DQ +   I  G  EASVRPGIVHRL
Sbjct: 180 GILHHCRLSTVSFSNPEVLHDADDASDDEFCALSSDQDYNGGISSGLYEASVRPGIVHRL 239

Query: 260 DKGTSGLLVVAKDEHSHSHLAEQFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRI 81
           DKGTSGLLVVAKDE+SH+HLAEQFKKHTIKRVYVS+TCGVPSP  GRI++PIGRD  NR+
Sbjct: 240 DKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSVTCGVPSPTCGRIEIPIGRDLNNRL 299

Query: 80  RMIANPGSATCGKARHAVSRYKVIEI 3
           RMIA PG  T  KAR+A SRY+VIEI
Sbjct: 300 RMIAAPGLNTRQKARYAASRYQVIEI 325


>ref|XP_022855456.1| RNA pseudouridine synthase 2, chloroplastic isoform X4 [Olea
           europaea var. sylvestris]
          Length = 319

 Score =  420 bits (1079), Expect = e-144
 Identities = 226/320 (70%), Positives = 255/320 (79%), Gaps = 7/320 (2%)
 Frame = -3

Query: 959 MLSPQSLSWHSV---KPLSISLRNPSLQKLISTARAYSTS---ISAANSDSDDFQNPVSG 798
           MLS  +LSW S    K L I+ RN  L ++    RA+ +S    SA N DSDD Q  +S 
Sbjct: 1   MLSLNALSWTSTPSAKALGINPRNSHLSRVHRIIRAFCSSPNSTSAGNLDSDDSQE-LSC 59

Query: 797 RPNNFSGFKIEETVELDSRKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSH 618
           R NNFSG K+EETV LDS KLRLDSW+SSRI+G+SRARVQSSIRSGLVSVNG +I+KVSH
Sbjct: 60  RVNNFSGIKLEETVGLDSGKLRLDSWISSRISGVSRARVQSSIRSGLVSVNGRVISKVSH 119

Query: 617 VVRDGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVN 438
           VVR+GD+VNC I +LQPLRAE EDIPLDIVYED+H+LVVNKPAHMVVHPAPGNATGTLVN
Sbjct: 120 VVREGDMVNCTIEQLQPLRAEAEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNATGTLVN 179

Query: 437 GILNHCRLSTV-FLSPEALPETDDDSGDEASAFSVDQGHTVDIGFGFSEASVRPGIVHRL 261
           GIL+HCRLSTV F +PE L + DD S DE  A S DQ +   I  G  EASVRPGIVHRL
Sbjct: 180 GILHHCRLSTVSFSNPEVLHDADDASDDEFCALSSDQDYNGGISSGLYEASVRPGIVHRL 239

Query: 260 DKGTSGLLVVAKDEHSHSHLAEQFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRI 81
           DKGTSGLLVVAKDE+SH+HLAEQFKKHTIKRVYVS+TCGVPSP  GRI++PIGRD  NR+
Sbjct: 240 DKGTSGLLVVAKDENSHAHLAEQFKKHTIKRVYVSVTCGVPSPTCGRIEIPIGRDLNNRL 299

Query: 80  RMIANPGSATCGKARHAVSR 21
           RMIA PG  T  KAR+A SR
Sbjct: 300 RMIAAPGLNTRQKARYAASR 319


>ref|XP_009798870.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana
           sylvestris]
          Length = 431

 Score =  387 bits (993), Expect = e-129
 Identities = 201/279 (72%), Positives = 232/279 (83%), Gaps = 2/279 (0%)
 Frame = -3

Query: 836 NSDSDDFQNPVSGRPNNFSGFKIEETVELDSRKLRLDSWLSSRINGISRARVQSSIRSGL 657
           +SDSDD  + ++GR +N+SG K+EETV++ + KLRLDSW+SSRINGISRARVQSSIRSGL
Sbjct: 38  DSDSDDSPSEITGRRSNYSGVKLEETVDVKTGKLRLDSWVSSRINGISRARVQSSIRSGL 97

Query: 656 VSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVV 477
           VSVNG + +KVSH V+ GD VNC IA+L+PLRAEPEDIPLDIVYED+HVLVVNKPAHMVV
Sbjct: 98  VSVNGRVTDKVSHTVKGGDKVNCTIADLKPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVV 157

Query: 476 HPAPGNATGTLVNGILNHCRLSTV-FLSPEALPETDDDSGDEASAFSVDQG-HTVDIGFG 303
           HPAPGNATGTLV+GIL+HC L TV F   E L + +DDS DE + FS DQ  + VD    
Sbjct: 158 HPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSDVEDDSDDELNLFSTDQSPYGVDSSV- 216

Query: 302 FSEASVRPGIVHRLDKGTSGLLVVAKDEHSHSHLAEQFKKHTIKRVYVSLTCGVPSPLSG 123
             E SVRPGIVHRLDKGTSGLLVVAK E S ++LAEQFKKHTIKRVYVS+TCGVP+ +SG
Sbjct: 217 VCEPSVRPGIVHRLDKGTSGLLVVAKTEQSLANLAEQFKKHTIKRVYVSITCGVPTSVSG 276

Query: 122 RIDVPIGRDPGNRIRMIANPGSATCGKARHAVSRYKVIE 6
           RID+PIGRD  NRIRMIA PGS   G+AR+A SRYKVIE
Sbjct: 277 RIDIPIGRDSNNRIRMIAIPGSHKGGRARNAASRYKVIE 315


>ref|XP_016492071.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Nicotiana tabacum]
          Length = 431

 Score =  386 bits (991), Expect = e-129
 Identities = 201/279 (72%), Positives = 231/279 (82%), Gaps = 2/279 (0%)
 Frame = -3

Query: 836 NSDSDDFQNPVSGRPNNFSGFKIEETVELDSRKLRLDSWLSSRINGISRARVQSSIRSGL 657
           +SDSDD    ++GR +N+SG K+EETV++ + KLRLDSW+SSRINGISRARVQSSIRSGL
Sbjct: 38  DSDSDDSPGEITGRRSNYSGVKLEETVDVKTGKLRLDSWVSSRINGISRARVQSSIRSGL 97

Query: 656 VSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVV 477
           VSVNG + +KVSH V+ GD VNC IA+L+PLRAEPEDIPLDIVYED+HVLVVNKPAHMVV
Sbjct: 98  VSVNGRVTDKVSHTVKGGDKVNCTIADLKPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVV 157

Query: 476 HPAPGNATGTLVNGILNHCRLSTV-FLSPEALPETDDDSGDEASAFSVDQG-HTVDIGFG 303
           HPAPGNATGTLV+GIL+HC L TV F   E L + +DDS DE + FS DQ  + VD    
Sbjct: 158 HPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSDVEDDSHDELNLFSTDQSPYGVDSSV- 216

Query: 302 FSEASVRPGIVHRLDKGTSGLLVVAKDEHSHSHLAEQFKKHTIKRVYVSLTCGVPSPLSG 123
             E SVRPGIVHRLDKGTSGLLVVAK E S ++LAEQFKKHTIKRVYVS+TCGVP+ +SG
Sbjct: 217 VCEPSVRPGIVHRLDKGTSGLLVVAKTEQSLANLAEQFKKHTIKRVYVSITCGVPTSVSG 276

Query: 122 RIDVPIGRDPGNRIRMIANPGSATCGKARHAVSRYKVIE 6
           RID+PIGRD  NRIRMIA PGS   G+AR+A SRYKVIE
Sbjct: 277 RIDIPIGRDSNNRIRMIAIPGSHKGGRARNAASRYKVIE 315


>ref|XP_010320444.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
           [Solanum lycopersicum]
          Length = 430

 Score =  384 bits (987), Expect = e-128
 Identities = 201/303 (66%), Positives = 238/303 (78%), Gaps = 6/303 (1%)
 Frame = -3

Query: 896 PSLQKLISTARAYSTSISA-----ANSDSDDFQNPVSGRPNNFSGFKIEETVELDSRKLR 732
           P   K IS +R  S    A      +SDSDD  + + GR +N+SG K+EETV+  + KLR
Sbjct: 13  PQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVDSKTGKLR 72

Query: 731 LDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEP 552
           LDSW+SSRI+G+SRARVQSSIRSGLVSVNG + +KVSH+V+ GD V+C IA+L+PLRAEP
Sbjct: 73  LDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEP 132

Query: 551 EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTV-FLSPEALPET 375
           EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLV+GIL+HC L TV F   E L + 
Sbjct: 133 EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSDG 192

Query: 374 DDDSGDEASAFSVDQGHTVDIGFGFSEASVRPGIVHRLDKGTSGLLVVAKDEHSHSHLAE 195
           +D S DE + FS ++    D      E+SVRPGIVHRLDKGTSGLLVVAK+EHS + LAE
Sbjct: 193 EDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVAKNEHSLADLAE 252

Query: 194 QFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRIRMIANPGSATCGKARHAVSRYK 15
           QFKKHTIKRVYVS+TCGVP+ ++GR+D+PIGRD  NRIRM A PG+   GK+RHAVSRYK
Sbjct: 253 QFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRYK 312

Query: 14  VIE 6
           VIE
Sbjct: 313 VIE 315


>ref|XP_010320443.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
           [Solanum lycopersicum]
          Length = 431

 Score =  384 bits (987), Expect = e-128
 Identities = 201/303 (66%), Positives = 238/303 (78%), Gaps = 6/303 (1%)
 Frame = -3

Query: 896 PSLQKLISTARAYSTSISA-----ANSDSDDFQNPVSGRPNNFSGFKIEETVELDSRKLR 732
           P   K IS +R  S    A      +SDSDD  + + GR +N+SG K+EETV+  + KLR
Sbjct: 13  PQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVDSKTGKLR 72

Query: 731 LDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEP 552
           LDSW+SSRI+G+SRARVQSSIRSGLVSVNG + +KVSH+V+ GD V+C IA+L+PLRAEP
Sbjct: 73  LDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEP 132

Query: 551 EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTV-FLSPEALPET 375
           EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLV+GIL+HC L TV F   E L + 
Sbjct: 133 EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSDG 192

Query: 374 DDDSGDEASAFSVDQGHTVDIGFGFSEASVRPGIVHRLDKGTSGLLVVAKDEHSHSHLAE 195
           +D S DE + FS ++    D      E+SVRPGIVHRLDKGTSGLLVVAK+EHS + LAE
Sbjct: 193 EDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVAKNEHSLADLAE 252

Query: 194 QFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRIRMIANPGSATCGKARHAVSRYK 15
           QFKKHTIKRVYVS+TCGVP+ ++GR+D+PIGRD  NRIRM A PG+   GK+RHAVSRYK
Sbjct: 253 QFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRYK 312

Query: 14  VIE 6
           VIE
Sbjct: 313 VIE 315


>ref|XP_004238386.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Solanum lycopersicum]
          Length = 436

 Score =  384 bits (987), Expect = e-128
 Identities = 201/303 (66%), Positives = 238/303 (78%), Gaps = 6/303 (1%)
 Frame = -3

Query: 896 PSLQKLISTARAYSTSISA-----ANSDSDDFQNPVSGRPNNFSGFKIEETVELDSRKLR 732
           P   K IS +R  S    A      +SDSDD  + + GR +N+SG K+EETV+  + KLR
Sbjct: 13  PQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVDSKTGKLR 72

Query: 731 LDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEP 552
           LDSW+SSRI+G+SRARVQSSIRSGLVSVNG + +KVSH+V+ GD V+C IA+L+PLRAEP
Sbjct: 73  LDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEP 132

Query: 551 EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTV-FLSPEALPET 375
           EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLV+GIL+HC L TV F   E L + 
Sbjct: 133 EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSDG 192

Query: 374 DDDSGDEASAFSVDQGHTVDIGFGFSEASVRPGIVHRLDKGTSGLLVVAKDEHSHSHLAE 195
           +D S DE + FS ++    D      E+SVRPGIVHRLDKGTSGLLVVAK+EHS + LAE
Sbjct: 193 EDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVAKNEHSLADLAE 252

Query: 194 QFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRIRMIANPGSATCGKARHAVSRYK 15
           QFKKHTIKRVYVS+TCGVP+ ++GR+D+PIGRD  NRIRM A PG+   GK+RHAVSRYK
Sbjct: 253 QFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRYK 312

Query: 14  VIE 6
           VIE
Sbjct: 313 VIE 315


>ref|XP_019072097.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
           [Vitis vinifera]
          Length = 347

 Score =  379 bits (972), Expect = e-127
 Identities = 207/326 (63%), Positives = 243/326 (74%), Gaps = 7/326 (2%)
 Frame = -3

Query: 959 MLSPQSLSWHSVKPLSISL----RNPSLQKLISTARAYSTSISAANSDSDDFQNPVSGRP 792
           + S  S S+ S+   S S     RNP      S +R +    + +NS  +   + VSGR 
Sbjct: 2   IFSLNSASFFSISHTSQSALLFPRNPK-----SCSRVFRILRACSNSTDEPLVS-VSGRR 55

Query: 791 NNFSGFKIEETV---ELDSRKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVS 621
            N++G ++EETV     DS KLRLDSW+SSRI GISRARVQSSIRSGLVSVN  I++KVS
Sbjct: 56  TNYAGVRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKVS 115

Query: 620 HVVRDGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLV 441
           HV+R GD VNC I+ELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNA+GTLV
Sbjct: 116 HVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLV 175

Query: 440 NGILNHCRLSTVFLSPEALPETDDDSGDEASAFSVDQGHTVDIGFGFSEASVRPGIVHRL 261
           NGIL+HC L TV L P    E DD S DE ++F+  Q        G  E ++RPGIVHRL
Sbjct: 176 NGILHHCSLPTVAL-PNRDSEEDDISDDEFNSFAAGQ------NCGTCETNIRPGIVHRL 228

Query: 260 DKGTSGLLVVAKDEHSHSHLAEQFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRI 81
           DKGTSGLLVVAKDEHSH+HL+EQFK H+I RVY+SLT GVP+PLSGR+++P+GRDP NRI
Sbjct: 229 DKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRI 288

Query: 80  RMIANPGSATCGKARHAVSRYKVIEI 3
           RM A PG +  G+ARHA SRYKVIEI
Sbjct: 289 RMTAVPGPSNSGQARHAASRYKVIEI 314


>ref|XP_009620048.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana
           tomentosiformis]
          Length = 431

 Score =  382 bits (980), Expect = e-127
 Identities = 200/304 (65%), Positives = 235/304 (77%), Gaps = 6/304 (1%)
 Frame = -3

Query: 899 NPSLQKLISTARAYSTSISA-----ANSDSDDFQNPVSGRPNNFSGFKIEETVELDSRKL 735
           +P   K  S +R  S  I A      +SDSDD  + +  R +N+SG K+EETV++ + KL
Sbjct: 12  HPQNPKPFSFSRVSSFIIRAFSKFPGDSDSDDSPDEIQSRKSNYSGVKLEETVDIKTGKL 71

Query: 734 RLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAE 555
           RLDSW+SSRI+GISRARVQSSIRSGLVSVNG + +KVSH V+ GD VNC IA+L+PLRAE
Sbjct: 72  RLDSWVSSRIDGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDKVNCTIADLKPLRAE 131

Query: 554 PEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTV-FLSPEALPE 378
           PEDIPLDIVYED+HVLVVNKPAHMVVHPAPGN TGTLV+GIL+HC L T+ F   E L +
Sbjct: 132 PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNVTGTLVSGILHHCSLPTISFPGEEVLSD 191

Query: 377 TDDDSGDEASAFSVDQGHTVDIGFGFSEASVRPGIVHRLDKGTSGLLVVAKDEHSHSHLA 198
            +D SGDE + FS DQ           E S+RPGIVHRLDKGTSGLLVVAK E S ++LA
Sbjct: 192 VEDASGDELNMFSADQSPNGVDASRMYEPSIRPGIVHRLDKGTSGLLVVAKTEQSLANLA 251

Query: 197 EQFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRIRMIANPGSATCGKARHAVSRY 18
           EQFKKHTIKRVYVS+TCGVP+ +SGRID+PIGRD  NRIRM+A PGS   G+AR+A SRY
Sbjct: 252 EQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMVAIPGSHKGGRARNAASRY 311

Query: 17  KVIE 6
           KVIE
Sbjct: 312 KVIE 315


>ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
           [Solanum tuberosum]
          Length = 431

 Score =  382 bits (980), Expect = e-127
 Identities = 192/278 (69%), Positives = 231/278 (83%), Gaps = 1/278 (0%)
 Frame = -3

Query: 836 NSDSDDFQNPVSGRPNNFSGFKIEETVELDSRKLRLDSWLSSRINGISRARVQSSIRSGL 657
           +SDSDD  + + GR +N+SG K+EETV+  + KLRLDSW+SSRI+G+SRARVQSSIRSGL
Sbjct: 38  DSDSDDSPDEIPGRRSNYSGVKLEETVDGKTGKLRLDSWVSSRIDGVSRARVQSSIRSGL 97

Query: 656 VSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVV 477
           VSVNG + +KVSH+V+ GD V+C IA+L+PLRAEPEDIPLDIV+EDEHVLVVNKPAHMVV
Sbjct: 98  VSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVFEDEHVLVVNKPAHMVV 157

Query: 476 HPAPGNATGTLVNGILNHCRLSTV-FLSPEALPETDDDSGDEASAFSVDQGHTVDIGFGF 300
           HPAPGNATGTLV+GIL+HC L T+ FL  E L + +D S DE + FS ++    D     
Sbjct: 158 HPAPGNATGTLVSGILHHCSLPTISFLGEEVLSDAEDASDDELNVFSGNRSPNYDDSSVM 217

Query: 299 SEASVRPGIVHRLDKGTSGLLVVAKDEHSHSHLAEQFKKHTIKRVYVSLTCGVPSPLSGR 120
            E+SVRPGIVHRLDKGTSGLLVVAK+E+S + LAEQFKKHTIKRVYVS+TCGVP+ ++GR
Sbjct: 218 CESSVRPGIVHRLDKGTSGLLVVAKNENSLASLAEQFKKHTIKRVYVSITCGVPASVAGR 277

Query: 119 IDVPIGRDPGNRIRMIANPGSATCGKARHAVSRYKVIE 6
           +D+PIGRD  NRIRM A PG+   GK+RHAVSRYKVIE
Sbjct: 278 VDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRYKVIE 315


>ref|XP_016493442.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Nicotiana tabacum]
          Length = 431

 Score =  381 bits (979), Expect = e-127
 Identities = 200/304 (65%), Positives = 235/304 (77%), Gaps = 6/304 (1%)
 Frame = -3

Query: 899 NPSLQKLISTARAYSTSISA-----ANSDSDDFQNPVSGRPNNFSGFKIEETVELDSRKL 735
           +P   K  S +R  S  I A      +SDSDD  + +  R +N+SG K+EETV++ + KL
Sbjct: 12  HPQNPKPFSFSRVSSFIIRAFSKFPGDSDSDDSPDEIQSRRSNYSGVKLEETVDIKTGKL 71

Query: 734 RLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAE 555
           RLDSW+SSRI+GISRARVQSSIRSGLVSVNG + +KVSH V+ GD VNC IA+L+PLRAE
Sbjct: 72  RLDSWVSSRIDGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDKVNCTIADLKPLRAE 131

Query: 554 PEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTV-FLSPEALPE 378
           PEDIPLDIVYED+HVLVVNKPAHMVVHPAPGN TGTLV+GIL+HC L T+ F   E L +
Sbjct: 132 PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNVTGTLVSGILHHCSLPTISFPGEEVLSD 191

Query: 377 TDDDSGDEASAFSVDQGHTVDIGFGFSEASVRPGIVHRLDKGTSGLLVVAKDEHSHSHLA 198
            +D SGDE + FS DQ           E S+RPGIVHRLDKGTSGLLVVAK E S ++LA
Sbjct: 192 VEDASGDELNMFSADQSPNGVDASRMYEPSIRPGIVHRLDKGTSGLLVVAKTEQSLANLA 251

Query: 197 EQFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRIRMIANPGSATCGKARHAVSRY 18
           EQFKKHTIKRVYVS+TCGVP+ +SGRID+PIGRD  NRIRM+A PGS   G+AR+A SRY
Sbjct: 252 EQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMVAIPGSHKGGRARNAASRY 311

Query: 17  KVIE 6
           KVIE
Sbjct: 312 KVIE 315


>ref|XP_015073900.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
           [Solanum pennellii]
          Length = 431

 Score =  380 bits (976), Expect = e-127
 Identities = 199/303 (65%), Positives = 236/303 (77%), Gaps = 6/303 (1%)
 Frame = -3

Query: 896 PSLQKLISTARAYSTSISA-----ANSDSDDFQNPVSGRPNNFSGFKIEETVELDSRKLR 732
           P   K IS +R  S    A      +SDSDD  + + GR +N+SG K+EETV+  + KLR
Sbjct: 13  PQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVDSKTGKLR 72

Query: 731 LDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEP 552
           LDSW+SSRI+G+SRARVQSSIRSGLV VNG + +KVSH+V+ GD V+C IA+L+PLRAEP
Sbjct: 73  LDSWVSSRIDGVSRARVQSSIRSGLVFVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEP 132

Query: 551 EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTV-FLSPEALPET 375
           EDIPLDIVYED+HVLVVNKPAHMVVHPAPGNATGTLV+GIL+HC L TV F   E L + 
Sbjct: 133 EDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSDG 192

Query: 374 DDDSGDEASAFSVDQGHTVDIGFGFSEASVRPGIVHRLDKGTSGLLVVAKDEHSHSHLAE 195
           +D S DE + FS  +    D      E+SVRPGIVHRLDKGTSGLLVVAK+EHS + LAE
Sbjct: 193 EDASDDELNMFSAYRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVAKNEHSLADLAE 252

Query: 194 QFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRIRMIANPGSATCGKARHAVSRYK 15
           QFKKHTIKRVYVS+TCGVP+ ++GR+D+PIGRD  NRIRM A PG+   GK+RHAVSRYK
Sbjct: 253 QFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRYK 312

Query: 14  VIE 6
           VIE
Sbjct: 313 VIE 315


>ref|XP_015073899.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
           [Solanum pennellii]
          Length = 436

 Score =  380 bits (976), Expect = e-127
 Identities = 199/303 (65%), Positives = 236/303 (77%), Gaps = 6/303 (1%)
 Frame = -3

Query: 896 PSLQKLISTARAYSTSISA-----ANSDSDDFQNPVSGRPNNFSGFKIEETVELDSRKLR 732
           P   K IS +R  S    A      +SDSDD  + + GR +N+SG K+EETV+  + KLR
Sbjct: 13  PQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVDSKTGKLR 72

Query: 731 LDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDVVNCKIAELQPLRAEP 552
           LDSW+SSRI+G+SRARVQSSIRSGLV VNG + +KVSH+V+ GD V+C IA+L+PLRAEP
Sbjct: 73  LDSWVSSRIDGVSRARVQSSIRSGLVFVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEP 132

Query: 551 EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCRLSTV-FLSPEALPET 375
           EDIPLDIVYED+HVLVVNKPAHMVVHPAPGNATGTLV+GIL+HC L TV F   E L + 
Sbjct: 133 EDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSDG 192

Query: 374 DDDSGDEASAFSVDQGHTVDIGFGFSEASVRPGIVHRLDKGTSGLLVVAKDEHSHSHLAE 195
           +D S DE + FS  +    D      E+SVRPGIVHRLDKGTSGLLVVAK+EHS + LAE
Sbjct: 193 EDASDDELNMFSAYRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVAKNEHSLADLAE 252

Query: 194 QFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRIRMIANPGSATCGKARHAVSRYK 15
           QFKKHTIKRVYVS+TCGVP+ ++GR+D+PIGRD  NRIRM A PG+   GK+RHAVSRYK
Sbjct: 253 QFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRYK 312

Query: 14  VIE 6
           VIE
Sbjct: 313 VIE 315


>gb|OIT03965.1| rna uridine synthase 2, chloroplastic [Nicotiana attenuata]
          Length = 431

 Score =  380 bits (975), Expect = e-127
 Identities = 206/319 (64%), Positives = 241/319 (75%), Gaps = 2/319 (0%)
 Frame = -3

Query: 956 LSPQSLSWHSVKPLSISLRNPSLQKLISTARAYSTSISAANSDSDDFQNPVSGRPNNFSG 777
           L+P S+  H   P   S    S        RA+S      +SDSDD  + +  R +N+SG
Sbjct: 4   LTPTSIFVHPQNPKPFSFSRVSS----FIVRAFSKF--PGDSDSDDSPDEIQSRRSNYSG 57

Query: 776 FKIEETVELDSRKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDV 597
            K+EETV++ + KLRLDSW+SSRINGISRARVQSSIRSGLVSVNG + +KVSH V+ GD 
Sbjct: 58  VKLEETVDVKTGKLRLDSWVSSRINGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDK 117

Query: 596 VNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCR 417
           VNC IA+L+PLRAEPEDIPLDIVYED+HVLVVNKPAHMVVHPAPGNATGTLV+GIL+HC 
Sbjct: 118 VNCTIADLKPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCS 177

Query: 416 LSTV-FLSPEALPETDDDSGDEASAFSVDQG-HTVDIGFGFSEASVRPGIVHRLDKGTSG 243
           L TV F   E L + +D S DE + F  +Q  + VD      E SVRPGIVHRLDKGTSG
Sbjct: 178 LPTVSFQGEEVLSDVEDTSDDELNLFPANQSPYGVDSSV-MREPSVRPGIVHRLDKGTSG 236

Query: 242 LLVVAKDEHSHSHLAEQFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRIRMIANP 63
           LLVVAK E S ++LAEQFKKHTIKRVYVS+TCGVP+ +SGRID+PIGRD  NRIRM+A P
Sbjct: 237 LLVVAKTEQSLANLAEQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMVAIP 296

Query: 62  GSATCGKARHAVSRYKVIE 6
           GS   G+AR+A SRYKVIE
Sbjct: 297 GSHKGGRARNAASRYKVIE 315


>ref|XP_019244907.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
           [Nicotiana attenuata]
          Length = 440

 Score =  380 bits (975), Expect = e-126
 Identities = 206/319 (64%), Positives = 241/319 (75%), Gaps = 2/319 (0%)
 Frame = -3

Query: 956 LSPQSLSWHSVKPLSISLRNPSLQKLISTARAYSTSISAANSDSDDFQNPVSGRPNNFSG 777
           L+P S+  H   P   S    S        RA+S      +SDSDD  + +  R +N+SG
Sbjct: 4   LTPTSIFVHPQNPKPFSFSRVSS----FIVRAFSKF--PGDSDSDDSPDEIQSRRSNYSG 57

Query: 776 FKIEETVELDSRKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKVSHVVRDGDV 597
            K+EETV++ + KLRLDSW+SSRINGISRARVQSSIRSGLVSVNG + +KVSH V+ GD 
Sbjct: 58  VKLEETVDVKTGKLRLDSWVSSRINGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDK 117

Query: 596 VNCKIAELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNGILNHCR 417
           VNC IA+L+PLRAEPEDIPLDIVYED+HVLVVNKPAHMVVHPAPGNATGTLV+GIL+HC 
Sbjct: 118 VNCTIADLKPLRAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCS 177

Query: 416 LSTV-FLSPEALPETDDDSGDEASAFSVDQG-HTVDIGFGFSEASVRPGIVHRLDKGTSG 243
           L TV F   E L + +D S DE + F  +Q  + VD      E SVRPGIVHRLDKGTSG
Sbjct: 178 LPTVSFQGEEVLSDVEDTSDDELNLFPANQSPYGVDSSV-MREPSVRPGIVHRLDKGTSG 236

Query: 242 LLVVAKDEHSHSHLAEQFKKHTIKRVYVSLTCGVPSPLSGRIDVPIGRDPGNRIRMIANP 63
           LLVVAK E S ++LAEQFKKHTIKRVYVS+TCGVP+ +SGRID+PIGRD  NRIRM+A P
Sbjct: 237 LLVVAKTEQSLANLAEQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMVAIP 296

Query: 62  GSATCGKARHAVSRYKVIE 6
           GS   G+AR+A SRYKVIE
Sbjct: 297 GSHKGGRARNAASRYKVIE 315