BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00012876
         (635 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN07280.1| Heterogeneous nuclear ribonucleoprotein R (RRM su...    62   1e-15
gb|PIN03866.1| Heterogeneous nuclear ribonucleoprotein R (RRM su...    62   1e-15

>gb|PIN07280.1| Heterogeneous nuclear ribonucleoprotein R (RRM superfamily)
           [Handroanthus impetiginosus]
          Length = 539

 Score = 61.6 bits (148), Expect(2) = 1e-15
 Identities = 28/38 (73%), Positives = 30/38 (78%)
 Frame = +1

Query: 520 CWRCKMPRTRANAAATKSPEPEKPVETEEHVELGADND 633
           CW+ KMPR R +AAA KS E EKPVETEE VELG DND
Sbjct: 48  CWKHKMPRARGSAAAIKSAEAEKPVETEEQVELGGDND 85



 Score = 49.7 bits (117), Expect(2) = 1e-15
 Identities = 25/45 (55%), Positives = 27/45 (60%)
 Frame = +2

Query: 377 MEPILSKFLLWSSXXXXXXXXXXXXXXXSFANASGFCAFLRAALE 511
           MEPI S+FL WSS               SFANASGFCAFLRA +E
Sbjct: 1   MEPIQSRFLCWSSLWPFFLLLPIHIFLLSFANASGFCAFLRAVIE 45


>gb|PIN03866.1| Heterogeneous nuclear ribonucleoprotein R (RRM superfamily)
           [Handroanthus impetiginosus]
          Length = 539

 Score = 61.6 bits (148), Expect(2) = 1e-15
 Identities = 28/38 (73%), Positives = 30/38 (78%)
 Frame = +1

Query: 520 CWRCKMPRTRANAAATKSPEPEKPVETEEHVELGADND 633
           CW+ KMPR R +AAA KS E EKPVETEE VELG DND
Sbjct: 48  CWKHKMPRARGSAAAIKSAEAEKPVETEEQVELGGDND 85



 Score = 49.7 bits (117), Expect(2) = 1e-15
 Identities = 25/45 (55%), Positives = 27/45 (60%)
 Frame = +2

Query: 377 MEPILSKFLLWSSXXXXXXXXXXXXXXXSFANASGFCAFLRAALE 511
           MEPI S+FL WSS               SFANASGFCAFLRA +E
Sbjct: 1   MEPIQSRFLCWSSLWPFFLLSPIHIFLLSFANASGFCAFLRAVIE 45