BLASTX nr result

ID: Rehmannia31_contig00012831 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00012831
         (785 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012847871.1| PREDICTED: methyl-CpG-binding domain-contain...   103   9e-25
ref|XP_012847870.1| PREDICTED: methyl-CpG-binding domain-contain...   103   1e-24
ref|XP_012827978.1| PREDICTED: uncharacterized protein LOC105949...   106   2e-24
gb|OIT03015.1| hypothetical protein A4A49_30779 [Nicotiana atten...    80   3e-14
gb|OMO91254.1| Methyl-CpG DNA binding protein [Corchorus olitorius]    59   6e-07

>ref|XP_012847871.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like
           isoform X2 [Erythranthe guttata]
          Length = 95

 Score =  103 bits (258), Expect = 9e-25
 Identities = 46/71 (64%), Positives = 56/71 (78%)
 Frame = +3

Query: 144 GPAKKLTKRRVSDDDSWMPEGWVKKVSQRPQKGKFPGYVDKKYYAPGVARAFRSKAEALR 323
           G  KK TK+   DDDSWMPEGWVK+V++RP  GKFPGY DK+YYAPGV+RAFRSK +AL+
Sbjct: 15  GATKKPTKKTEVDDDSWMPEGWVKRVNKRPLTGKFPGYEDKRYYAPGVSRAFRSKVKALK 74

Query: 324 YIESLKNAATS 356
           YIE  +N   +
Sbjct: 75  YIEQQQNTTAT 85


>ref|XP_012847870.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like
           isoform X1 [Erythranthe guttata]
          Length = 98

 Score =  103 bits (258), Expect = 1e-24
 Identities = 46/71 (64%), Positives = 56/71 (78%)
 Frame = +3

Query: 144 GPAKKLTKRRVSDDDSWMPEGWVKKVSQRPQKGKFPGYVDKKYYAPGVARAFRSKAEALR 323
           G  KK TK+   DDDSWMPEGWVK+V++RP  GKFPGY DK+YYAPGV+RAFRSK +AL+
Sbjct: 15  GATKKPTKKTEVDDDSWMPEGWVKRVNKRPLTGKFPGYEDKRYYAPGVSRAFRSKVKALK 74

Query: 324 YIESLKNAATS 356
           YIE  +N   +
Sbjct: 75  YIEQQQNTTAT 85


>ref|XP_012827978.1| PREDICTED: uncharacterized protein LOC105949229 [Erythranthe
           guttata]
 ref|XP_012827979.1| PREDICTED: uncharacterized protein LOC105949229 [Erythranthe
           guttata]
          Length = 203

 Score =  106 bits (265), Expect = 2e-24
 Identities = 51/99 (51%), Positives = 65/99 (65%), Gaps = 10/99 (10%)
 Frame = +3

Query: 90  EPSRTEERMGDGSGETSS----------GPAKKLTKRRVSDDDSWMPEGWVKKVSQRPQK 239
           +P +  ER+G+ S               G  KK TK+   DDDSWMPEGWVK+V++RP  
Sbjct: 95  QPHKERERVGERSAMPCGPSKQKKAKLGGATKKPTKKTEEDDDSWMPEGWVKRVNKRPLT 154

Query: 240 GKFPGYVDKKYYAPGVARAFRSKAEALRYIESLKNAATS 356
           GKFPGY DK+YYAPGV+RAFRSK +AL+YIE  +N   +
Sbjct: 155 GKFPGYEDKRYYAPGVSRAFRSKVKALKYIEQQQNTTAT 193


>gb|OIT03015.1| hypothetical protein A4A49_30779 [Nicotiana attenuata]
          Length = 240

 Score = 80.1 bits (196), Expect = 3e-14
 Identities = 44/89 (49%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = +3

Query: 87  EEPSRTEERMGDGSGETSSGPAKKLTKRRVS--DDDSWMPEGWVKKVSQRPQKGKFPGYV 260
           +E  + E+  G  S        K+  +R+ S  DDDSW+PEGW KKV    + GK  GYV
Sbjct: 103 QETGQLEQETGQSSNANEEVQKKRRKRRKSSNGDDDSWLPEGW-KKVETCRRNGKTAGYV 161

Query: 261 DKKYYAPGVARAFRSKAEALRYIESLKNA 347
           DK Y APGV RAFRSK  AL YIE  K A
Sbjct: 162 DKSYKAPGVGRAFRSKKAALEYIEKQKLA 190


>gb|OMO91254.1| Methyl-CpG DNA binding protein [Corchorus olitorius]
          Length = 208

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
 Frame = +3

Query: 87  EEPSRTEERMGDGSGETSSGPAKKLTKRRVSDDDSWMPEGWVKKVSQRPQKGKFPGYVDK 266
           E P R    + +G  + S   A+   KRRV   ++W+P GW+ +   R   G   G VDK
Sbjct: 34  ETPKRPNGSISNGGADKSPSSAEPKAKRRVVPPETWLPAGWLVEDRVR-TSGATAGSVDK 92

Query: 267 KYYAPGVARAFRSKAEALRYIES----LKNAATSS 359
            Y  P   R FRSK E L Y+E+     K A TSS
Sbjct: 93  YYVDPSSGRKFRSKNEVLYYLETGTKRKKGAGTSS 127


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