BLASTX nr result

ID: Rehmannia31_contig00012789 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00012789
         (378 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN14569.1| U5 snRNP-associated RNA splicing factor [Handroan...   166   2e-47
ref|XP_011082569.1| pre-mRNA-splicing factor 18 [Sesamum indicum]     166   2e-47
gb|PNX79222.1| pre-mRNA-splicing factor 18-like protein [Trifoli...   157   6e-47
gb|KHN02574.1| Pre-mRNA-splicing factor 18 [Glycine soja]             155   3e-46
gb|KHN10671.1| Pre-mRNA-splicing factor 18 [Glycine soja]             157   5e-46
ref|XP_016204637.1| pre-mRNA-splicing factor 18 [Arachis ipaensis]    162   9e-46
ref|XP_015943550.1| LOW QUALITY PROTEIN: pre-mRNA-splicing facto...   162   9e-46
ref|XP_015969588.1| pre-mRNA-splicing factor 18 [Arachis duranen...   162   9e-46
emb|CBI28698.3| unnamed protein product, partial [Vitis vinifera]     154   1e-45
ref|XP_016180024.1| pre-mRNA-splicing factor 18-like [Arachis ip...   161   2e-45
ref|XP_023549183.1| pre-mRNA-splicing factor 18-like [Cucurbita ...   160   3e-45
ref|XP_022992522.1| pre-mRNA-splicing factor 18-like [Cucurbita ...   160   3e-45
ref|XP_022954136.1| pre-mRNA-splicing factor 18 [Cucurbita mosch...   160   3e-45
ref|XP_012833237.1| PREDICTED: pre-mRNA-splicing factor 18 [Eryt...   159   9e-45
ref|XP_022150292.1| pre-mRNA-splicing factor 18 [Momordica chara...   159   1e-44
gb|KZV17035.1| pre-mRNA-splicing factor 18 [Dorcoceras hygrometr...   159   2e-44
ref|XP_008451349.1| PREDICTED: pre-mRNA-splicing factor 18 [Cucu...   158   3e-44
ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18 [Cucu...   158   3e-44
ref|XP_010090411.1| pre-mRNA-splicing factor 18 [Morus notabilis...   157   4e-44
ref|XP_013449742.1| splicing factor Prp18 family protein [Medica...   157   6e-44

>gb|PIN14569.1| U5 snRNP-associated RNA splicing factor [Handroanthus
           impetiginosus]
          Length = 414

 Score =  166 bits (420), Expect = 2e-47
 Identities = 86/93 (92%), Positives = 90/93 (96%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG
Sbjct: 323 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 382

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKDD 99
           SDLQSLLAEE ++GGK  ++EERLLLMPASKDD
Sbjct: 383 SDLQSLLAEEGSAGGK-PNSEERLLLMPASKDD 414


>ref|XP_011082569.1| pre-mRNA-splicing factor 18 [Sesamum indicum]
          Length = 415

 Score =  166 bits (420), Expect = 2e-47
 Identities = 86/93 (92%), Positives = 89/93 (95%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQS+KRLMTFAQRRYPTMPSKAVEFNSLANG
Sbjct: 324 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFAQRRYPTMPSKAVEFNSLANG 383

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKDD 99
           SDLQSLLAEER+SG K  S EERLLLMPA+KDD
Sbjct: 384 SDLQSLLAEERSSGEKHHS-EERLLLMPATKDD 415


>gb|PNX79222.1| pre-mRNA-splicing factor 18-like protein [Trifolium pratense]
          Length = 149

 Score =  157 bits (397), Expect = 6e-47
 Identities = 78/92 (84%), Positives = 85/92 (92%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYPT+PSKAVEFNSLANG
Sbjct: 57  VGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANG 116

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDLQSLLAEER SGG   S++ERL +MPA ++
Sbjct: 117 SDLQSLLAEERFSGGNQASSDERLRIMPAPRE 148


>gb|KHN02574.1| Pre-mRNA-splicing factor 18 [Glycine soja]
          Length = 159

 Score =  155 bits (393), Expect = 3e-46
 Identities = 79/92 (85%), Positives = 85/92 (92%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYPT+PSKAVEFNSLANG
Sbjct: 68  VGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANG 127

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDL SLLAEER SGG  Q++EERL +MPA +D
Sbjct: 128 SDLHSLLAEERFSGGN-QASEERLRIMPAPRD 158


>gb|KHN10671.1| Pre-mRNA-splicing factor 18 [Glycine soja]
          Length = 204

 Score =  157 bits (396), Expect = 5e-46
 Identities = 78/92 (84%), Positives = 84/92 (91%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYPT+PSKAVEFNSLANG
Sbjct: 112 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANG 171

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDL SLLAEER SGG   ++EERL +MPA +D
Sbjct: 172 SDLHSLLAEERFSGGNQAASEERLRIMPAPRD 203


>ref|XP_016204637.1| pre-mRNA-splicing factor 18 [Arachis ipaensis]
          Length = 426

 Score =  162 bits (410), Expect = 9e-46
 Identities = 82/92 (89%), Positives = 86/92 (93%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPTMPSKAVEFNSLANG
Sbjct: 334 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANG 393

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDLQSLLAEER SGG  Q++EERL +MPA +D
Sbjct: 394 SDLQSLLAEERFSGGTNQASEERLRIMPAPRD 425


>ref|XP_015943550.1| LOW QUALITY PROTEIN: pre-mRNA-splicing factor 18-like [Arachis
           duranensis]
          Length = 426

 Score =  162 bits (410), Expect = 9e-46
 Identities = 82/92 (89%), Positives = 86/92 (93%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPTMPSKAVEFNSLANG
Sbjct: 334 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANG 393

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDLQSLLAEER SGG  Q++EERL +MPA +D
Sbjct: 394 SDLQSLLAEERFSGGTNQASEERLRIMPAPRD 425


>ref|XP_015969588.1| pre-mRNA-splicing factor 18 [Arachis duranensis]
          Length = 426

 Score =  162 bits (410), Expect = 9e-46
 Identities = 82/92 (89%), Positives = 86/92 (93%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPTMPSKAVEFNSLANG
Sbjct: 334 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANG 393

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDLQSLLAEER SGG  Q++EERL +MPA +D
Sbjct: 394 SDLQSLLAEERFSGGTNQASEERLRIMPAPRD 425


>emb|CBI28698.3| unnamed protein product, partial [Vitis vinifera]
          Length = 159

 Score =  154 bits (389), Expect = 1e-45
 Identities = 81/92 (88%), Positives = 84/92 (91%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPTMPSKAVEFNSLANG
Sbjct: 68  VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANG 127

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDLQSLLAEER SGG  Q++EERL LM   K+
Sbjct: 128 SDLQSLLAEERFSGGN-QASEERLHLMAPPKE 158


>ref|XP_016180024.1| pre-mRNA-splicing factor 18-like [Arachis ipaensis]
          Length = 426

 Score =  161 bits (408), Expect = 2e-45
 Identities = 82/92 (89%), Positives = 86/92 (93%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPTMPSKAVEFNSLANG
Sbjct: 334 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANG 393

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDLQSLLAEER SGG  Q++EERL +MPA +D
Sbjct: 394 SDLQSLLAEERFSGGINQASEERLRIMPAPRD 425


>ref|XP_023549183.1| pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo]
 ref|XP_023549184.1| pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo]
 ref|XP_023549185.1| pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo]
          Length = 420

 Score =  160 bits (406), Expect = 3e-45
 Identities = 81/92 (88%), Positives = 85/92 (92%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPTMPSKAVEFNSLANG
Sbjct: 328 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANG 387

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDLQSLLAEER SGG  Q ++ERL +MPA +D
Sbjct: 388 SDLQSLLAEERVSGGGKQGSDERLRIMPAPED 419


>ref|XP_022992522.1| pre-mRNA-splicing factor 18-like [Cucurbita maxima]
 ref|XP_022992523.1| pre-mRNA-splicing factor 18-like [Cucurbita maxima]
 ref|XP_022992524.1| pre-mRNA-splicing factor 18-like [Cucurbita maxima]
          Length = 420

 Score =  160 bits (406), Expect = 3e-45
 Identities = 81/92 (88%), Positives = 85/92 (92%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPTMPSKAVEFNSLANG
Sbjct: 328 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANG 387

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDLQSLLAEER SGG  Q ++ERL +MPA +D
Sbjct: 388 SDLQSLLAEERVSGGGKQGSDERLRIMPAPED 419


>ref|XP_022954136.1| pre-mRNA-splicing factor 18 [Cucurbita moschata]
 ref|XP_022954137.1| pre-mRNA-splicing factor 18 [Cucurbita moschata]
 ref|XP_022954138.1| pre-mRNA-splicing factor 18 [Cucurbita moschata]
          Length = 420

 Score =  160 bits (406), Expect = 3e-45
 Identities = 81/92 (88%), Positives = 85/92 (92%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPTMPSKAVEFNSLANG
Sbjct: 328 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANG 387

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDLQSLLAEER SGG  Q ++ERL +MPA +D
Sbjct: 388 SDLQSLLAEERVSGGGKQGSDERLRIMPAPED 419


>ref|XP_012833237.1| PREDICTED: pre-mRNA-splicing factor 18 [Erythranthe guttata]
 gb|EYU40918.1| hypothetical protein MIMGU_mgv1a007137mg [Erythranthe guttata]
          Length = 418

 Score =  159 bits (403), Expect = 9e-45
 Identities = 85/94 (90%), Positives = 88/94 (93%), Gaps = 1/94 (1%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG
Sbjct: 326 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 385

Query: 197 SDLQSLLA-EERASGGKFQSNEERLLLMPASKDD 99
           SDLQSLLA EE+ + GK  S EERL+LMPASKDD
Sbjct: 386 SDLQSLLAEEEKLTRGKLNS-EERLMLMPASKDD 418


>ref|XP_022150292.1| pre-mRNA-splicing factor 18 [Momordica charantia]
 ref|XP_022150293.1| pre-mRNA-splicing factor 18 [Momordica charantia]
          Length = 420

 Score =  159 bits (402), Expect = 1e-44
 Identities = 81/92 (88%), Positives = 85/92 (92%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPTMPSKAVEFNSLANG
Sbjct: 328 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANG 387

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDLQSLLAEER SGG  Q++EERL +M A +D
Sbjct: 388 SDLQSLLAEERVSGGGKQASEERLRIMAAPED 419


>gb|KZV17035.1| pre-mRNA-splicing factor 18 [Dorcoceras hygrometricum]
          Length = 417

 Score =  159 bits (401), Expect = 2e-44
 Identities = 82/93 (88%), Positives = 85/93 (91%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQS+KRLMTFAQRRYPTMPSKAVEFNSLANG
Sbjct: 326 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFAQRRYPTMPSKAVEFNSLANG 385

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKDD 99
           SDLQSLLAEE   GG  Q  EE+LLLMPA K+D
Sbjct: 386 SDLQSLLAEEMPFGGNHQ-KEEKLLLMPAPKED 417


>ref|XP_008451349.1| PREDICTED: pre-mRNA-splicing factor 18 [Cucumis melo]
          Length = 420

 Score =  158 bits (399), Expect = 3e-44
 Identities = 80/92 (86%), Positives = 84/92 (91%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPTMPSKAVEFNSLANG
Sbjct: 328 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANG 387

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDLQSLLAEER SGG    ++ERL +MPA +D
Sbjct: 388 SDLQSLLAEERVSGGGKLGSDERLRIMPAPED 419


>ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18 [Cucumis sativus]
 gb|KGN44809.1| hypothetical protein Csa_7G388420 [Cucumis sativus]
          Length = 420

 Score =  158 bits (399), Expect = 3e-44
 Identities = 80/92 (86%), Positives = 84/92 (91%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPTMPSKAVEFNSLANG
Sbjct: 328 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANG 387

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDLQSLLAEER SGG    ++ERL +MPA +D
Sbjct: 388 SDLQSLLAEERVSGGGKLGSDERLRIMPAPED 419


>ref|XP_010090411.1| pre-mRNA-splicing factor 18 [Morus notabilis]
 gb|EXB39381.1| Pre-mRNA-splicing factor 18 [Morus notabilis]
          Length = 415

 Score =  157 bits (398), Expect = 4e-44
 Identities = 81/93 (87%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTF QRRYPT+PSKAVEFNSLANG
Sbjct: 322 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTLPSKAVEFNSLANG 381

Query: 197 SDLQSLLAEERASGG-KFQSNEERLLLMPASKD 102
           SDLQSLLAEER SGG   Q+ EERL +MPA +D
Sbjct: 382 SDLQSLLAEERVSGGSSSQAGEERLRIMPAPRD 414


>ref|XP_013449742.1| splicing factor Prp18 family protein [Medicago truncatula]
 gb|KEH23770.1| splicing factor Prp18 family protein [Medicago truncatula]
          Length = 411

 Score =  157 bits (397), Expect = 6e-44
 Identities = 80/92 (86%), Positives = 86/92 (93%)
 Frame = -2

Query: 377 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFAQRRYPTMPSKAVEFNSLANG 198
           VGIHERSAREKIYTNSVAHIMNDETTRKYLQS+KRLMTF QRRYPT+PSKAVEFNSLANG
Sbjct: 320 VGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTLPSKAVEFNSLANG 379

Query: 197 SDLQSLLAEERASGGKFQSNEERLLLMPASKD 102
           SDLQSLLAEER SGG  QS+EERL +MPA ++
Sbjct: 380 SDLQSLLAEERFSGGN-QSSEERLRIMPAPRE 410


Top