BLASTX nr result
ID: Rehmannia31_contig00012788
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00012788
(333 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011094749.1| pentatricopeptide repeat-containing protein ... 71 6e-12
ref|XP_022888959.1| pentatricopeptide repeat-containing protein ... 67 9e-11
ref|XP_012831937.1| PREDICTED: pentatricopeptide repeat-containi... 67 1e-10
dbj|GAV84190.1| PPR domain-containing protein/PPR_2 domain-conta... 63 4e-09
ref|XP_019077254.1| PREDICTED: pentatricopeptide repeat-containi... 57 5e-07
ref|XP_019077253.1| PREDICTED: pentatricopeptide repeat-containi... 57 5e-07
ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi... 57 5e-07
ref|XP_010653452.1| PREDICTED: pentatricopeptide repeat-containi... 57 5e-07
gb|PIN13305.1| hypothetical protein CDL12_14076 [Handroanthus im... 54 4e-06
ref|XP_018835388.1| PREDICTED: pentatricopeptide repeat-containi... 54 4e-06
ref|XP_010696356.1| PREDICTED: pentatricopeptide repeat-containi... 54 6e-06
ref|XP_019102681.1| PREDICTED: pentatricopeptide repeat-containi... 54 6e-06
>ref|XP_011094749.1| pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Sesamum indicum]
Length = 848
Score = 70.9 bits (172), Expect = 6e-12
Identities = 38/56 (67%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Frame = -2
Query: 332 NDVRRDKGSPAHSSLNLEEVLERSGSSQALESPT-RRPVVLQRLKVTRKSLNHWLQ 168
ND RRD+GSP HS+L LEE +RS A ESPT RRP+VLQRLKVTR+SL+ WLQ
Sbjct: 782 NDTRRDQGSPTHSNLKLEE-FDRSSLPHAPESPTTRRPLVLQRLKVTRESLHRWLQ 836
>ref|XP_022888959.1| pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Olea europaea var. sylvestris]
Length = 418
Score = 67.4 bits (163), Expect = 9e-11
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = -2
Query: 332 NDVRRDKGSPAHSSLNLEEVLERSGSSQALESPTRRPVVLQRLKVTRKSLNHWLQ 168
N+ + D +P S+L LE+ L+RSG S LESPTRRPVVLQRLK+T++SL+HWLQ
Sbjct: 357 NNKKSDVENPVCSNLKLED-LKRSGPSPQLESPTRRPVVLQRLKITKESLHHWLQ 410
>ref|XP_012831937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Erythranthe guttata]
gb|EYU41644.1| hypothetical protein MIMGU_mgv1a001284mg [Erythranthe guttata]
Length = 847
Score = 67.4 bits (163), Expect = 1e-10
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = -2
Query: 320 RDKGSPAHSSLNLEEVLERSGSSQALESPTRRPVVLQRLKVTRKSLNHWLQ 168
R KGS +SS ++ E +ERS S QA ESPTRRP+VLQRLKVTR+SL+HWLQ
Sbjct: 783 RGKGSRMYSS-SIGETIERSESKQASESPTRRPMVLQRLKVTRESLHHWLQ 832
>dbj|GAV84190.1| PPR domain-containing protein/PPR_2 domain-containing protein/PPR_3
domain-containing protein [Cephalotus follicularis]
Length = 846
Score = 62.8 bits (151), Expect = 4e-09
Identities = 30/46 (65%), Positives = 38/46 (82%)
Frame = -2
Query: 305 PAHSSLNLEEVLERSGSSQALESPTRRPVVLQRLKVTRKSLNHWLQ 168
P ++ NL++VL R+ S+ L SPTRRPV+LQRLKVTRKSL+HWLQ
Sbjct: 793 PFNTDANLKDVLGRNRLSRELLSPTRRPVILQRLKVTRKSLHHWLQ 838
>ref|XP_019077254.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X4 [Vitis vinifera]
Length = 806
Score = 57.0 bits (136), Expect = 5e-07
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -2
Query: 329 DVRRDKGSPAHSSLNLEEVLERSGSSQALESPTRRPVVLQRLKVTRKSLNHWLQ 168
D R + G P S + +E L R+ LES TRRP VLQR KVTRKSL+HWLQ
Sbjct: 745 DKRINLGGPPGSDPDWQEALGRNRLPTELESSTRRPAVLQRFKVTRKSLDHWLQ 798
>ref|XP_019077253.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X3 [Vitis vinifera]
Length = 836
Score = 57.0 bits (136), Expect = 5e-07
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -2
Query: 329 DVRRDKGSPAHSSLNLEEVLERSGSSQALESPTRRPVVLQRLKVTRKSLNHWLQ 168
D R + G P S + +E L R+ LES TRRP VLQR KVTRKSL+HWLQ
Sbjct: 775 DKRINLGGPPGSDPDWQEALGRNRLPTELESSTRRPAVLQRFKVTRKSLDHWLQ 828
>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Vitis vinifera]
emb|CBI32618.3| unnamed protein product, partial [Vitis vinifera]
Length = 842
Score = 57.0 bits (136), Expect = 5e-07
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -2
Query: 329 DVRRDKGSPAHSSLNLEEVLERSGSSQALESPTRRPVVLQRLKVTRKSLNHWLQ 168
D R + G P S + +E L R+ LES TRRP VLQR KVTRKSL+HWLQ
Sbjct: 781 DKRINLGGPPGSDPDWQEALGRNRLPTELESSTRRPAVLQRFKVTRKSLDHWLQ 834
>ref|XP_010653452.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Vitis vinifera]
Length = 852
Score = 57.0 bits (136), Expect = 5e-07
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -2
Query: 329 DVRRDKGSPAHSSLNLEEVLERSGSSQALESPTRRPVVLQRLKVTRKSLNHWLQ 168
D R + G P S + +E L R+ LES TRRP VLQR KVTRKSL+HWLQ
Sbjct: 791 DKRINLGGPPGSDPDWQEALGRNRLPTELESSTRRPAVLQRFKVTRKSLDHWLQ 844
>gb|PIN13305.1| hypothetical protein CDL12_14076 [Handroanthus impetiginosus]
Length = 840
Score = 54.3 bits (129), Expect = 4e-06
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = -2
Query: 329 DVRRDKGSPAHSSLNLEEVLERSGSSQALESPTRRPVVLQRLKVTRKSLNHWLQ 168
D+ RDKG VLE S S++ E+PTRRPVVL RLK+T +SL+HWLQ
Sbjct: 777 DITRDKG-----------VLEGSSSTRESEAPTRRPVVLHRLKLTGESLHHWLQ 819
>ref|XP_018835388.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Juglans regia]
Length = 861
Score = 54.3 bits (129), Expect = 4e-06
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = -2
Query: 296 SSLNLEEVLERSGSSQALESPTRRPVVLQRLKVTRKSLNHWLQ 168
S +NLEE++ R+ LE TRRP ++QRLK+TRKSL++WLQ
Sbjct: 811 SDINLEELIGRNSLPAKLECSTRRPAIVQRLKITRKSLHYWLQ 853
>ref|XP_010696356.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Beta vulgaris subsp. vulgaris]
gb|KMS97002.1| hypothetical protein BVRB_7g179510 [Beta vulgaris subsp. vulgaris]
Length = 864
Score = 53.9 bits (128), Expect = 6e-06
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = -2
Query: 317 DKGSPAHSSLNLEEVLERSGSSQALESPTRRPVVLQRLKVTRKSLNHWLQ 168
DK ++S L VLE+S +L++P RRP VLQRL VT+KSL+HWL+
Sbjct: 807 DKKGTSNSVLKSRSVLEKSEFPYSLDTPARRPAVLQRLLVTKKSLSHWLR 856
>ref|XP_019102681.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Beta vulgaris subsp. vulgaris]
Length = 872
Score = 53.9 bits (128), Expect = 6e-06
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = -2
Query: 317 DKGSPAHSSLNLEEVLERSGSSQALESPTRRPVVLQRLKVTRKSLNHWLQ 168
DK ++S L VLE+S +L++P RRP VLQRL VT+KSL+HWL+
Sbjct: 815 DKKGTSNSVLKSRSVLEKSEFPYSLDTPARRPAVLQRLLVTKKSLSHWLR 864