BLASTX nr result

ID: Rehmannia31_contig00012724 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00012724
         (569 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNT14487.1| hypothetical protein POPTR_010G033600v3 [Populus ...    61   1e-08

>gb|PNT14487.1| hypothetical protein POPTR_010G033600v3 [Populus trichocarpa]
          Length = 125

 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 35/50 (70%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
 Frame = -1

Query: 371 NPIPSLRAFVFFGLSYGHSRLNKS*LCYP-GILRELRRHRAYS*KKVFYS 225
           NP+  LR    FGLSYGHSRLNKS      GILRELRRHRAYS KKVF S
Sbjct: 17  NPVKFLRFPPLFGLSYGHSRLNKSKSVISLGILRELRRHRAYSSKKVFSS 66


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