BLASTX nr result

ID: Rehmannia31_contig00012437 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00012437
         (368 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011079725.1| peptide chain release factor APG3, chloropla...    55   3e-06
gb|KZN04978.1| hypothetical protein DCAR_005815 [Daucus carota s...    52   3e-06
gb|KZV54354.1| peptide chain release factor 1-like [Dorcoceras h...    54   7e-06

>ref|XP_011079725.1| peptide chain release factor APG3, chloroplastic [Sesamum indicum]
          Length = 414

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +3

Query: 3   GDMETAVQSCATMEQKEILEELAESVNAMAT 95
           GD+ETAVQSCATMEQKE+LEELA SV AMAT
Sbjct: 384 GDIETAVQSCATMEQKELLEELAGSVGAMAT 414


>gb|KZN04978.1| hypothetical protein DCAR_005815 [Daucus carota subsp. sativus]
          Length = 80

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = +3

Query: 3   GDMETAVQSCATMEQKEILEELAESVNAMA 92
           GD+ETAVQSCATMEQKE+LEELAES  A A
Sbjct: 50  GDIETAVQSCATMEQKELLEELAESAGAPA 79


>gb|KZV54354.1| peptide chain release factor 1-like [Dorcoceras hygrometricum]
          Length = 407

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +3

Query: 3   GDMETAVQSCATMEQKEILEELAESVNAMA 92
           GD+ETA+QSC TMEQKE+LEELAESV AMA
Sbjct: 377 GDIETAIQSCVTMEQKELLEELAESVGAMA 406


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