BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00012218
         (556 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP64043.1| Retrovirus-related Pol polyprotein from transposo...   146   2e-39
dbj|BAT97420.1| hypothetical protein VIGAN_09086300 [Vigna angul...   143   5e-38
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           147   2e-37
gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposo...   146   3e-37
gb|KYP38667.1| Retrovirus-related Pol polyprotein from transposo...   143   2e-36
gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposo...   143   5e-36
ref|XP_016647234.1| PREDICTED: retrovirus-related Pol polyprotei...   138   8e-36
gb|KYP40135.1| Retrovirus-related Pol polyprotein from transposo...   137   1e-35
gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinen...   140   3e-35
emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]   140   5e-35
gb|PHU21416.1| hypothetical protein BC332_06523 [Capsicum chinense]   139   8e-35
gb|KYP64759.1| Retrovirus-related Pol polyprotein from transposo...   135   8e-35
gb|PKI48613.1| hypothetical protein CRG98_031032 [Punica granatum]    135   2e-34
gb|KYP60452.1| Retrovirus-related Pol polyprotein from transposo...   132   8e-34
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]   136   9e-34
gb|OMO59210.1| Integrase, catalytic core [Corchorus capsularis]       136   1e-33
gb|PNX95528.1| putative gag/pol polyprotein [Trifolium pratense]      136   1e-33
gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposo...   135   3e-33
gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposo...   135   3e-33
emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera]   133   9e-33

>gb|KYP64043.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 336

 Score =  146 bits (368), Expect = 2e-39
 Identities = 83/184 (45%), Positives = 117/184 (63%), Gaps = 10/184 (5%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKSS----QALAVES*GR---- 399
           + ET VVS SNS P+G LT +MVK+SL NEETRR GQG  SS    + L VES G+    
Sbjct: 144 NLETWVVSRSNSTPNGKLTFNMVKDSLLNEETRRKGQGMASSSTHNEVLVVESSGKSHQR 203

Query: 398 --HKGNDQDKGKGRSKSRDPRKCYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEE 225
             H+ N+++K KG+S +R   KC+YCNK GH++K+C   K+D+  + K   KK D A   
Sbjct: 204 NSHRYNNRNKLKGKSMTRKDIKCFYCNKMGHLMKECKFLKRDK-SRVKGKDKKEDKAK-- 260

Query: 224 DTSATVFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTV 45
             + T+  +G+VV++  D  N +++     +W+ID ATSFH TP  E+F++Y +GDFG V
Sbjct: 261 -GTTTIVSNGEVVIVYDD--NSINLACQVYEWVIDFATSFHVTPYCEYFTSYNVGDFGRV 317

Query: 44  KFGN 33
             GN
Sbjct: 318 NMGN 321


>dbj|BAT97420.1| hypothetical protein VIGAN_09086300 [Vigna angularis var.
           angularis]
          Length = 378

 Score =  143 bits (361), Expect = 5e-38
 Identities = 82/191 (42%), Positives = 119/191 (62%), Gaps = 7/191 (3%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKS-SQALAVES*GRHKGNDQ- 381
           S++TLVV+LSNSAPDG L++D + +SL NEE+RR  +G+ S S+A  VE+ GR +   + 
Sbjct: 150 SWDTLVVTLSNSAPDGKLSLDNITDSLLNEESRRKERGSSSHSEANVVENRGRSENRSKG 209

Query: 380 --DKGKGRSKSRDPR-KCYYCNKHGHVIKDC--YKRKQDEGDQKKTNQKKVDSANEEDTS 216
             +K +GR KSR     C+YC K GH  ++C   KR Q  G              E+ T+
Sbjct: 210 KREKSRGRFKSRSKGLTCFYCGKDGHKKQECRFLKRDQKNGTVHPDMVDPKQKLEEKTTT 269

Query: 215 ATVFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKFG 36
           A V  D +V +++  + NYL++   D  WI+D+  SFH TP++ FFS+Y+ GDFGTVK G
Sbjct: 270 AVVSNDENVFLIT--EVNYLNIAIDDCTWIVDTGASFHVTPHEGFFSSYQKGDFGTVKMG 327

Query: 35  NNNKTSIVGVG 3
           N+  + IVG+G
Sbjct: 328 NHVTSKIVGIG 338


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  147 bits (370), Expect = 2e-37
 Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 5/189 (2%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKSSQA--LAVES*GRHKGNDQ 381
           S+ETL VS++NSAP+G++ M+ VK+ + NEE RR  QG  SSQ+  LAV + GR +   Q
Sbjct: 153 SWETLKVSITNSAPNGVVNMETVKSGILNEEMRRRSQGTSSSQSEVLAVTTRGRSQNKSQ 212

Query: 380 ---DKGKGRSKSRDPRKCYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEEDTSAT 210
              DK +G+S      +C+YC K GH+ + C   +Q + DQKK   KKV      D    
Sbjct: 213 SNRDKSRGKSNKFANVECHYCKKKGHIKRFC---RQFQNDQKKNKGKKVKPEESSDDETN 269

Query: 209 VFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKFGNN 30
            F + +VV       + +++T+ ++ W+IDS  + HATP +E FS+Y LGDFG VK GN 
Sbjct: 270 SFGEFNVVY----DDDIINLTTQEMTWVIDSGATIHATPRRELFSSYTLGDFGRVKMGNA 325

Query: 29  NKTSIVGVG 3
           N +++VG G
Sbjct: 326 NFSTVVGKG 334


>gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1321

 Score =  146 bits (369), Expect = 3e-37
 Identities = 75/184 (40%), Positives = 109/184 (59%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKSSQALAVES*GRHKGNDQDK 375
           S++TLVVSLSNSAP+G ++++MV+NS+ NEE RR       + AL  E   R K      
Sbjct: 154 SWDTLVVSLSNSAPEGKVSLNMVRNSILNEEIRRRDVAKNETHALVTERRSRSKSRTPRG 213

Query: 374 GKGRSKSRDPRKCYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEEDTSATVFPDG 195
            +  SKSR+ R CY C K GH+ K+C   K++  D+        + AN+ +T+AT     
Sbjct: 214 HRDHSKSRERRSCYNCGKPGHLKKNCRFLKKEIQDK--------NQANDRNTAATTSASD 265

Query: 194 DVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKFGNNNKTSI 15
           D + L  ++    H+   D +WIIDSA S+H  P +E+F+TY+ GDFG V  GN + + I
Sbjct: 266 DEITLLCNQGECCHIAEPDEEWIIDSAASYHCVPKREYFTTYRKGDFGHVNMGNKSTSQI 325

Query: 14  VGVG 3
           VG+G
Sbjct: 326 VGIG 329


>gb|KYP38667.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 603

 Score =  143 bits (360), Expect = 2e-36
 Identities = 78/190 (41%), Positives = 119/190 (62%), Gaps = 6/190 (3%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKS-SQALAVES*GRHKGND-- 384
           S+ET  VS++NSAP+G++++   K+   NEE RR  QG+ S S+ L  E+ GR +  +  
Sbjct: 153 SWETFRVSITNSAPNGVVSLQAAKSGALNEEMRRKAQGSSSQSEVLITENRGRSQKKELK 212

Query: 383 --QDKGKGRSKSRDPR-KCYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEEDTSA 213
             ++K + +SKSR    +CYYCNK GH+ K+C+  K+ E   KK  QK+ D  ++   +A
Sbjct: 213 GSREKSRSKSKSRYKNVECYYCNKPGHIQKNCFLWKK-ENKGKKGKQKEKDHDDDRVATA 271

Query: 212 TVFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKFGN 33
           T    GD+V+LS   H  +++ S +  WIIDS  + H TP KEFF++Y  GDFG +K GN
Sbjct: 272 TC---GDLVILS--DHGLINLVSDESMWIIDSGATLHVTPRKEFFTSYTSGDFGVLKMGN 326

Query: 32  NNKTSIVGVG 3
           +  + ++GVG
Sbjct: 327 DGVSKVIGVG 336


>gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1314

 Score =  143 bits (360), Expect = 5e-36
 Identities = 82/194 (42%), Positives = 116/194 (59%), Gaps = 10/194 (5%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKSS-QALAVES*GRHKGNDQD 378
           S++TL+++LSNSAP+G L++D V +SL NEE+RR  +G  +  +A  +++ GR K  ++ 
Sbjct: 146 SWDTLIITLSNSAPEGKLSLDSVTDSLLNEESRRRERGLNNQFEANVIDNRGRSKNREKG 205

Query: 377 ---KGKGRSKSRDPRKCYYCNKHGHVIKDCYKRKQDEG------DQKKTNQKKVDSANEE 225
              K +GRSKSR    CYYC K GH   +C   K+D+       DQ    +KK D     
Sbjct: 206 GRGKSQGRSKSRTRICCYYCGKPGHRKSECRFLKKDQQAGTVHPDQIDPRKKKEDGTTTA 265

Query: 224 DTSATVFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTV 45
            TS  VF  G+         NYL++   +  WIIDS  SFH TP++EFFS+Y+ GDFG V
Sbjct: 266 VTSDDVFLVGE--------ENYLNIAFDECIWIIDSGASFHVTPHEEFFSSYQKGDFGMV 317

Query: 44  KFGNNNKTSIVGVG 3
           K GN+  + IVG+G
Sbjct: 318 KMGNHVTSKIVGIG 331


>ref|XP_016647234.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Prunus mume]
          Length = 394

 Score =  138 bits (347), Expect = 8e-36
 Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 14/196 (7%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQG-AKSSQALAVES*GR------- 399
           S++TLVVSLSNSAP G+LT+D+VK+S+FNEE RR  QG    S+AL  E  GR       
Sbjct: 212 SWDTLVVSLSNSAPQGVLTLDIVKDSMFNEEARRKEQGVVAESEALVSEYRGRTNNRKFH 271

Query: 398 ----HKGNDQDKGKGRSKSRDPRKCYYCNKHGHVIKDC--YKRKQDEGDQKKTNQKKVDS 237
                KG  +D  +GRSK+R   +CY+C   GH+ ++C  +KR+QD G++K         
Sbjct: 272 RQDKSKGRSRDGLRGRSKTRKDLECYHCGGIGHMKRECRLFKREQDRGNEKN-------- 323

Query: 236 ANEEDTSATVFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGD 57
            +   T+AT     +V++L  D    L        WI+DS  SFH T  ++FF++Y  GD
Sbjct: 324 -DARHTTATTSGGNEVIILCGDGFVILSRY-----WIVDSGASFHVTSRRDFFTSYTNGD 377

Query: 56  FGTVKFGNNNKTSIVG 9
           FG V+ GN+  + IVG
Sbjct: 378 FGNVRMGNDKLSKIVG 393


>gb|KYP40135.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 371

 Score =  137 bits (345), Expect = 1e-35
 Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKSS----QALAVES*GR---- 399
           S+ETLV SLSNSAP+G LT +MVK+S  NEET+R GQG  SS    +AL +ES  R    
Sbjct: 94  SWETLVASLSNSAPNGKLTFNMVKDSFLNEETKRKGQGMDSSLTHNEALIMESRRRSHQR 153

Query: 398 --HKGNDQDKGKGRSKSRDPRKCYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEE 225
             H+ +D+ K KGRS++R   KC++CNK GH++KDC + K                  ++
Sbjct: 154 NSHRYDDRSKSKGRSRTRKDIKCFHCNKMGHLMKDCREDK------------------DK 195

Query: 224 DTSATVFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTV 45
           DT+ T+  +G+VV++  D  N +++   + +W+IDSA SF+ T + E+F++Y + DFG V
Sbjct: 196 DTT-TIVSNGEVVIVYND--NSINLALQEYEWVIDSAASFNVTRHYEYFTSYTVSDFGQV 252

Query: 44  KFGNNNKTSIV 12
           K  N   + +V
Sbjct: 253 KMVNQGVSKVV 263


>gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1340

 Score =  140 bits (354), Expect = 3e-35
 Identities = 84/191 (43%), Positives = 116/191 (60%), Gaps = 7/191 (3%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKSSQALAVES*GRHKGNDQDK 375
           ++ET VV++SNSAPDG+L+MD VKN++ NEETRR    + +SQ    E  GR K     K
Sbjct: 154 NWETFVVTVSNSAPDGVLSMDNVKNNMLNEETRRKSSSSDNSQVFVTEHRGRSKSRGP-K 212

Query: 374 GKGRSKSRDPR----KCYYCNKHGHVIKDCYKRKQD--EGDQKKTNQKKVDSANEEDTSA 213
           G GRS SR       KC++C   GH+ K+C K K+D  EG    T+Q   D+ N   T+A
Sbjct: 213 GHGRSMSRSRTRFNGKCHHCGIFGHMKKNCNKLKKDPKEGRDGNTHQPNDDTRN---TAA 269

Query: 212 TVFPDGDVVVLSFDKHNYLHMTS-SDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKFG 36
           +V  D +   L  +    LH+   S + W++DS  SFHATP+ E+F+TY+ GDFG VK G
Sbjct: 270 SVSHD-ECEFLCLEGE-CLHVDDCSSVAWVVDSGASFHATPHLEYFTTYQGGDFGRVKMG 327

Query: 35  NNNKTSIVGVG 3
           N+  + I G+G
Sbjct: 328 NDGYSKISGIG 338


>emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]
          Length = 788

 Score =  140 bits (352), Expect = 5e-35
 Identities = 76/190 (40%), Positives = 115/190 (60%), Gaps = 7/190 (3%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKSS-QALAVES*GRHKGNDQ- 381
           S+ETLVVSLSNS P+G++T++MVK+++FNEE +R   G  S+ +AL  E  GR K     
Sbjct: 21  SWETLVVSLSNSTPNGVITINMVKDNMFNEEAKRKKLGISSNTEALVTERRGRSKSRKPS 80

Query: 380 -----DKGKGRSKSRDPRKCYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEEDTS 216
                DK +G+SKS+   KC YC+K GH+ ++C K K+++  +K   QK      ++   
Sbjct: 81  SDYNCDKSRGKSKSQKDIKCLYCDKPGHIKRECRKFKREQFKRKGEEQK------DDKDI 134

Query: 215 ATVFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKFG 36
           A V  +GD + +  D    +++   D  W++D+ TSFH T  ++FFS+Y  G FG VK G
Sbjct: 135 AAVASNGDTINIVCDDA-CVNLACQDSTWVVDTTTSFHITARRDFFSSYTSGSFGWVKMG 193

Query: 35  NNNKTSIVGV 6
           N  K  I+G+
Sbjct: 194 NEAKCEIIGM 203


>gb|PHU21416.1| hypothetical protein BC332_06523 [Capsicum chinense]
          Length = 652

 Score =  139 bits (349), Expect = 8e-35
 Identities = 78/192 (40%), Positives = 110/192 (57%), Gaps = 8/192 (4%)
 Frame = -3

Query: 554  SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKSSQA----LAVES*GRHKGN 387
            S+ETL VSL+NS P GI+TM+ VK+ + NEE RR  Q + SS +    L  E  GR+K  
Sbjct: 462  SWETLRVSLTNSTPSGIVTMEYVKSGVLNEEMRRRSQASSSSSSHSDVLVTEERGRNKSR 521

Query: 386  DQ-DKGKGRSKSRDPRK---CYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEEDT 219
            D  D+ K RSKSR   K   C YCNK GH++K CYK K+D   QKK          + + 
Sbjct: 522  DSNDRDKSRSKSRSKFKNVTCDYCNKKGHIMKYCYKHKRDIRRQKKEG--------DNEN 573

Query: 218  SATVFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKF 39
               V  + D++V   +  N +++   +  W +DS  + H TP KE  S+Y  G+FG +K 
Sbjct: 574  RVVVVANDDLLVACGE--NAINLVRDESSWFVDSGATSHVTPKKELSSSYTPGNFGMLKM 631

Query: 38   GNNNKTSIVGVG 3
            GNN+K  ++G+G
Sbjct: 632  GNNDKVKVLGIG 643


>gb|KYP64759.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 369

 Score =  135 bits (339), Expect = 8e-35
 Identities = 74/191 (38%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKSSQALAV-------ES*GRH 396
           S++TLVV+LSNSAP+G LTMD V +SL  EE+RRM +G        +       E+ GR 
Sbjct: 146 SWDTLVVTLSNSAPEGKLTMDAVSDSLLGEESRRMERGESIHPEANIIENRGKNETRGRS 205

Query: 395 KGNDQDKGKGRSKSRDPRKCYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEEDTS 216
           K  DQ + +GRSKSR    CYYC + GH   +C   K+D+               + +  
Sbjct: 206 KSRDQYQSRGRSKSRSKITCYYCGRMGHRKMECRSFKRDQ---------------KAEDM 250

Query: 215 ATVFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKFG 36
             +  +G+++ +++D          D  WI+DS  SFH TP+  FFS+Y+ GDFGTV+ G
Sbjct: 251 LYIIREGNILNIAYD----------DSSWIVDSGASFHVTPHGSFFSSYQSGDFGTVQMG 300

Query: 35  NNNKTSIVGVG 3
           N +++ IVG+G
Sbjct: 301 NQDRSKIVGIG 311


>gb|PKI48613.1| hypothetical protein CRG98_031032 [Punica granatum]
          Length = 435

 Score =  135 bits (340), Expect = 2e-34
 Identities = 76/195 (38%), Positives = 113/195 (57%), Gaps = 11/195 (5%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAK-SSQALAVES*GRHK----- 393
           +++TLVV+LSNSAP+G L++ MV +SLFNEETR+   G    S+AL  E  GR +     
Sbjct: 38  NWDTLVVALSNSAPNGKLSLVMVTDSLFNEETRKKSSGISIRSEALVTEQRGRSQSKNSS 97

Query: 392 ---GNDQDKGKGRSKSRDPR--KCYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANE 228
              GN  DK +GRSKS+  +   CY+  K GH  ++C   K+        NQ     + +
Sbjct: 98  SKHGNSGDKSRGRSKSKTRKVVTCYHYGKEGHYKRECRALKK--------NQNGNGESKK 149

Query: 227 EDTSATVFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGT 48
           E+ + TV  DG+  ++  +   Y++ T  D  W+ D+  SFH TP+++FFS+Y  GD+G 
Sbjct: 150 EEGTTTVASDGETYIVCDEA--YVNFTCQDSTWVADTGVSFHVTPHRDFFSSYTTGDYGY 207

Query: 47  VKFGNNNKTSIVGVG 3
           V+ GN     IVG+G
Sbjct: 208 VRMGNGQSCKIVGIG 222


>gb|KYP60452.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 367

 Score =  132 bits (332), Expect = 8e-34
 Identities = 71/190 (37%), Positives = 115/190 (60%), Gaps = 6/190 (3%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKS-SQALAVES*GRHKGNDQD 378
           S+ET  VS++NSAP+G++++   K+   NEE RR  QG+ S S+ L  E+ GR +  +  
Sbjct: 153 SWETFRVSITNSAPNGVVSLQAAKSGALNEEMRRKAQGSSSQSEVLVTENKGRSRKKELK 212

Query: 377 KGKGRSKSRDPRK-----CYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEEDTSA 213
            G+ +S+S+   K     C+Y +K GH+ ++C+  K+ E   KK  QK+ D  +++D   
Sbjct: 213 GGREKSRSKSKSKYKNVECHYSHKTGHIQRNCFMWKK-ENRGKKGKQKEKD--HDDDDCV 269

Query: 212 TVFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKFGN 33
                GD+V+LS   H  +++ S +  WI+DS  + H TP KEFF++Y  GDFG +K GN
Sbjct: 270 ATATCGDLVILS--DHGSVNLVSDESMWIVDSGATLHVTPWKEFFTSYTSGDFGVLKMGN 327

Query: 32  NNKTSIVGVG 3
           +  + ++GVG
Sbjct: 328 DGVSKVIGVG 337


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  136 bits (343), Expect = 9e-34
 Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKS-SQALAVES*GRHKGNDQD 378
           S+ET   SLSNSAPDGI+ MD+VK+ + NEE RR  QG+ S S  L +   GR K     
Sbjct: 131 SWETFRTSLSNSAPDGIMNMDLVKSCVLNEEMRRKSQGSSSQSNVLVIXKXGRSKSRGP- 189

Query: 377 KGKGRSKSRDPR----KCYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEEDTSAT 210
           K + RSKS+  +    +C+YC+  GH+ K C + K+D   Q K  +KK D+  E+D  AT
Sbjct: 190 KNRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDM-KQGKVKEKKNDNGGEDDQVAT 248

Query: 209 VFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKFGNN 30
              D  +V  S    + ++    +  W+ID   S HATP K+FF++Y  GDFG+V+ GN+
Sbjct: 249 TISDFLIVYDS----DVVNFACQESXWVIDXGASIHATPQKDFFTSYTSGDFGSVRMGND 304

Query: 29  NKTSIVGVG 3
                +G+G
Sbjct: 305 GSAKAIGMG 313


>gb|OMO59210.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 855

 Score =  136 bits (342), Expect = 1e-33
 Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 5/189 (2%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKSSQALAVES*GRHKGNDQ-- 381
           S++TLVV ++NSAPD  +TM+M  ++  NEE RR  + + SSQALA+E+ GR +   Q  
Sbjct: 4   SWDTLVVMVTNSAPDKKVTMEMANDASLNEEARRTNRESGSSQALAIENRGRSREKVQGF 63

Query: 380 ---DKGKGRSKSRDPRKCYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEEDTSAT 210
               K K RSKSRDP K  +C K GH+ ++C   KQ+  D K        ++ EE     
Sbjct: 64  RGRSKSKNRSKSRDPVKRNHCGKVGHLKRNCKLLKQERKDGKSKK-----NSEEESNVTV 118

Query: 209 VFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKFGNN 30
           V  D + V L     +  H+T    +WI+D+  ++H  P +E F+TYK GDF   + GN 
Sbjct: 119 VVSDEETVSLICGHGDCNHVTDPSNEWIVDTGATYHCVPKRELFTTYKAGDFSETRMGNK 178

Query: 29  NKTSIVGVG 3
           + + IVG+G
Sbjct: 179 SVSQIVGIG 187


>gb|PNX95528.1| putative gag/pol polyprotein [Trifolium pratense]
          Length = 1339

 Score =  136 bits (342), Expect = 1e-33
 Identities = 69/192 (35%), Positives = 113/192 (58%), Gaps = 8/192 (4%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKS-SQALAVES*GR------- 399
           S+ET   SLSNSAP+GI++MD+ K+S+ NEE RR  QG+ S S+ L  ES GR       
Sbjct: 153 SWETFRTSLSNSAPNGIISMDLAKSSVLNEELRRKSQGSSSHSEVLVTESRGRQQSRGPS 212

Query: 398 HKGNDQDKGKGRSKSRDPRKCYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEEDT 219
           ++G  +DK +G S      +C++C + G + + C K K++   +   N  K +  N ED 
Sbjct: 213 NRGTSRDKSQGGSNRFSNIECHHCGEKGDIKRFCRKLKRENKKKGYNNNNKKEGNNNEDV 272

Query: 218 SATVFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKF 39
           +       D  ++  +    ++++  ++DW++DS  S HAT  ++ FSTY+ GDFG V+ 
Sbjct: 273 AIV----DDFFIVCDNCVENINLSCDEMDWVVDSGASTHATSRRDLFSTYETGDFGVVRM 328

Query: 38  GNNNKTSIVGVG 3
           GNN + +++G+G
Sbjct: 329 GNNGQANVIGIG 340


>gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score =  135 bits (339), Expect = 3e-33
 Identities = 74/191 (38%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKSSQALAV-------ES*GRH 396
           S++TLVV+LSNSAP+G LTMD V +SL  EE+RRM +G        +       E+ GR 
Sbjct: 156 SWDTLVVTLSNSAPEGKLTMDAVSDSLLGEESRRMERGESIHPEANIIENRGKNETRGRS 215

Query: 395 KGNDQDKGKGRSKSRDPRKCYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEEDTS 216
           K  DQ + +GRSKSR    CYYC + GH   +C   K+D+               + +  
Sbjct: 216 KSRDQYQSRGRSKSRSKITCYYCGRMGHRKMECRSFKRDQ---------------KAEDM 260

Query: 215 ATVFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKFG 36
             +  +G+++ +++D          D  WI+DS  SFH TP+  FFS+Y+ GDFGTV+ G
Sbjct: 261 LYIIREGNILNIAYD----------DSSWIVDSGASFHVTPHGSFFSSYQSGDFGTVQMG 310

Query: 35  NNNKTSIVGVG 3
           N +++ IVG+G
Sbjct: 311 NQDRSKIVGIG 321


>gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score =  135 bits (339), Expect = 3e-33
 Identities = 74/191 (38%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKSSQALAV-------ES*GRH 396
           S++TLVV+LSNSAP+G LTMD V +SL  EE+RRM +G        +       E+ GR 
Sbjct: 156 SWDTLVVTLSNSAPEGKLTMDAVSDSLLGEESRRMERGESIHPEANIIENRGKNETRGRS 215

Query: 395 KGNDQDKGKGRSKSRDPRKCYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEEDTS 216
           K  DQ + +GRSKSR    CYYC + GH   +C   K+D+               + +  
Sbjct: 216 KSRDQYQSRGRSKSRSKITCYYCGRMGHRKMECRSFKRDQ---------------KAEDM 260

Query: 215 ATVFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKFG 36
             +  +G+++ +++D          D  WI+DS  SFH TP+  FFS+Y+ GDFGTV+ G
Sbjct: 261 LYIIREGNILNIAYD----------DSSWIVDSGASFHVTPHGSFFSSYQSGDFGTVQMG 310

Query: 35  NNNKTSIVGVG 3
           N +++ IVG+G
Sbjct: 311 NQDRSKIVGIG 321


>emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera]
          Length = 649

 Score =  133 bits (334), Expect = 9e-33
 Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAKS-SQALAVES*GRHKGNDQD 378
           S+ET   SLS SAPDG + MD+VK+ + NEE RR  QG  S S  L  E  GR K     
Sbjct: 107 SWETFRTSLSISAPDGTMNMDLVKSCVLNEEMRRKLQGPPSQSDVLVTEKRGRSKSRGP- 165

Query: 377 KGKGRSKSRDPR----KCYYCNKHGHVIKDCYKRKQDEGDQKKTNQKKVDSANEEDTSAT 210
           K K RSKS+  +    +C+YC+  GH+ K C + K++   Q+K   KK D++ E+D  AT
Sbjct: 166 KNKDRSKSKTNKFVNVECHYCHLKGHIRKYCRQLKRNM-KQRKVKNKKNDNSGEDDRVAT 224

Query: 209 VFPDGDVVVLSFDKHNYLHMTSSDIDWIIDSATSFHATPNKEFFSTYKLGDFGTVKFGNN 30
              D  +V  S    + ++ +  +  W+IDS  S HATP K+FF++Y  GDFG+V+ GN+
Sbjct: 225 TISDFLIVYDS----DVVNFSCQETSWVIDSGASIHATPRKDFFTSYTSGDFGSVRMGND 280

Query: 29  NKTSIVGVG 3
                +G+G
Sbjct: 281 GSAKAIGMG 289