BLASTX nr result
ID: Rehmannia31_contig00011650
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00011650
(1178 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011077190.1| mediator of RNA polymerase II transcription ... 209 4e-82
ref|XP_020549553.1| mediator of RNA polymerase II transcription ... 209 4e-82
gb|PIN17547.1| hypothetical protein CDL12_09792 [Handroanthus im... 206 5e-80
ref|XP_011070829.1| mediator of RNA polymerase II transcription ... 194 2e-76
ref|XP_022854372.1| mediator of RNA polymerase II transcription ... 191 2e-74
ref|XP_020547658.1| mediator of RNA polymerase II transcription ... 186 3e-74
ref|XP_020547659.1| mediator of RNA polymerase II transcription ... 186 3e-74
gb|KZV35948.1| mediator of RNA polymerase II transcription subun... 168 2e-68
ref|XP_012082044.1| mediator of RNA polymerase II transcription ... 124 8e-41
ref|XP_012082045.1| mediator of RNA polymerase II transcription ... 124 8e-41
gb|OWM86467.1| hypothetical protein CDL15_Pgr026359 [Punica gran... 124 3e-40
emb|CDP00585.1| unnamed protein product [Coffea canephora] 137 3e-40
ref|XP_022776985.1| mediator of RNA polymerase II transcription ... 122 4e-40
ref|XP_015895700.1| PREDICTED: mediator of RNA polymerase II tra... 124 5e-40
ref|XP_016666817.1| PREDICTED: mediator of RNA polymerase II tra... 121 7e-40
ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II tra... 121 7e-40
ref|XP_016666818.1| PREDICTED: mediator of RNA polymerase II tra... 121 7e-40
ref|XP_017621524.1| PREDICTED: mediator of RNA polymerase II tra... 121 7e-40
ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II tra... 121 7e-40
ref|XP_017621525.1| PREDICTED: mediator of RNA polymerase II tra... 121 7e-40
>ref|XP_011077190.1| mediator of RNA polymerase II transcription subunit 25-like isoform
X1 [Sesamum indicum]
Length = 806
Score = 209 bits (531), Expect(2) = 4e-82
Identities = 131/260 (50%), Positives = 141/260 (54%), Gaps = 7/260 (2%)
Frame = +3
Query: 3 MTPNNENVQDMKP----LAPTSRPVGGAAANVRILNDVAQARQALAGGTSIGLPSMGGTP 170
M +NENV DMKP + P+ RPVG A ANVRILNDVAQARQALAGGTSIGLPSMGGTP
Sbjct: 334 MVSSNENVHDMKPQVTSMTPSLRPVG-APANVRILNDVAQARQALAGGTSIGLPSMGGTP 392
Query: 171 MLSNVISSGM---XXXXXXXXXXXXXGITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVT 341
MLSN+ISSGM G+ SIAGSLPIP VT
Sbjct: 393 MLSNMISSGMASSVPPAQTVISSGSSGVASIAGSLPIPASGQVAQNSSSASFTSTAPTVT 452
Query: 342 GNSSIGMSQSLSNLQASVSMGQTLPSMSQGSLPVPXXXXXXXXXXXXXXXXXXXXXXXXX 521
G SS+GMSQSLSNLQ S S+GQ+LP MSQG+LPV
Sbjct: 453 GTSSLGMSQSLSNLQVSGSLGQSLPGMSQGNLPVTQMVQTGMSMNQNMMSGTGTTGMPSG 512
Query: 522 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNMPLNXXXXXXXXXXXXKYVKVWEGNLSGQ 701
TNMPLN KYVKVWEGNLSGQ
Sbjct: 513 SGNMMPTPGMSQQIPPGMQPVGVNSNNSVTNMPLNQQTSSTIQPAQSKYVKVWEGNLSGQ 572
Query: 702 RQGQPVFITRLEGYRSASAS 761
RQGQPVFITRLEGYR+ASAS
Sbjct: 573 RQGQPVFITRLEGYRNASAS 592
Score = 126 bits (316), Expect(2) = 4e-82
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ
Sbjct: 623 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 682
Query: 989 IPS 997
IP+
Sbjct: 683 IPN 685
>ref|XP_020549553.1| mediator of RNA polymerase II transcription subunit 25-like isoform
X2 [Sesamum indicum]
Length = 751
Score = 209 bits (531), Expect(2) = 4e-82
Identities = 131/260 (50%), Positives = 141/260 (54%), Gaps = 7/260 (2%)
Frame = +3
Query: 3 MTPNNENVQDMKP----LAPTSRPVGGAAANVRILNDVAQARQALAGGTSIGLPSMGGTP 170
M +NENV DMKP + P+ RPVG A ANVRILNDVAQARQALAGGTSIGLPSMGGTP
Sbjct: 279 MVSSNENVHDMKPQVTSMTPSLRPVG-APANVRILNDVAQARQALAGGTSIGLPSMGGTP 337
Query: 171 MLSNVISSGM---XXXXXXXXXXXXXGITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVT 341
MLSN+ISSGM G+ SIAGSLPIP VT
Sbjct: 338 MLSNMISSGMASSVPPAQTVISSGSSGVASIAGSLPIPASGQVAQNSSSASFTSTAPTVT 397
Query: 342 GNSSIGMSQSLSNLQASVSMGQTLPSMSQGSLPVPXXXXXXXXXXXXXXXXXXXXXXXXX 521
G SS+GMSQSLSNLQ S S+GQ+LP MSQG+LPV
Sbjct: 398 GTSSLGMSQSLSNLQVSGSLGQSLPGMSQGNLPVTQMVQTGMSMNQNMMSGTGTTGMPSG 457
Query: 522 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNMPLNXXXXXXXXXXXXKYVKVWEGNLSGQ 701
TNMPLN KYVKVWEGNLSGQ
Sbjct: 458 SGNMMPTPGMSQQIPPGMQPVGVNSNNSVTNMPLNQQTSSTIQPAQSKYVKVWEGNLSGQ 517
Query: 702 RQGQPVFITRLEGYRSASAS 761
RQGQPVFITRLEGYR+ASAS
Sbjct: 518 RQGQPVFITRLEGYRNASAS 537
Score = 126 bits (316), Expect(2) = 4e-82
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ
Sbjct: 568 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 627
Query: 989 IPS 997
IP+
Sbjct: 628 IPN 630
>gb|PIN17547.1| hypothetical protein CDL12_09792 [Handroanthus impetiginosus]
Length = 804
Score = 206 bits (523), Expect(2) = 5e-80
Identities = 128/260 (49%), Positives = 141/260 (54%), Gaps = 7/260 (2%)
Frame = +3
Query: 3 MTPNNENVQDMKPL----APTSRPVGGAAANVRILNDVAQARQALAGGTSIGLPSMGGTP 170
M NNENV D+KP+ A + RP+ GAAANVRILNDVAQARQALAGGTSIGLPSMGGTP
Sbjct: 333 MVSNNENVPDIKPVVSNVASSLRPLSGAAANVRILNDVAQARQALAGGTSIGLPSMGGTP 392
Query: 171 MLSNVISSGMXXXXXXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVT 341
MLSN+IS GM G +TS+AGS+PIP NV+
Sbjct: 393 MLSNMISGGMTSSVPPSQTVISSGPSGVTSVAGSMPIPVTGQVVQNSAPASFISTASNVS 452
Query: 342 GNSSIGMSQSLSNLQASVSMGQTLPSMSQGSLPVPXXXXXXXXXXXXXXXXXXXXXXXXX 521
GNSS+ MSQ LSNLQ SVS+GQT P M+QG+L P
Sbjct: 453 GNSSLAMSQPLSNLQGSVSLGQTPPGMTQGNL--PVTQMAQTGMSINQNMMSAGGASGMP 510
Query: 522 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNMPLNXXXXXXXXXXXXKYVKVWEGNLSGQ 701
TNMPLN KYVKVWEGNLSGQ
Sbjct: 511 SGTGTMIPTPGMSQQGQPGTQPVGVNNNNTNMPLNQQTSSTIQSAQSKYVKVWEGNLSGQ 570
Query: 702 RQGQPVFITRLEGYRSASAS 761
RQGQPVFITRLEGYRSASAS
Sbjct: 571 RQGQPVFITRLEGYRSASAS 590
Score = 122 bits (306), Expect(2) = 5e-80
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA+RLIGMLFPGDMVVFKPQ
Sbjct: 621 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQ 680
Query: 989 IPS 997
IP+
Sbjct: 681 IPN 683
>ref|XP_011070829.1| mediator of RNA polymerase II transcription subunit 25 isoform X2
[Sesamum indicum]
Length = 788
Score = 194 bits (492), Expect(2) = 2e-76
Identities = 125/261 (47%), Positives = 139/261 (53%), Gaps = 8/261 (3%)
Frame = +3
Query: 3 MTPNNENVQDMKP----LAPTSRPVGGAAANVRILNDVAQARQALAGGTS-IGLPSMGGT 167
M PNN NV D+KP +AP+ RPVG A ANVRILNDVAQARQALAGGTS IGLPS+GGT
Sbjct: 333 MIPNNANVPDVKPSVTNMAPSLRPVG-APANVRILNDVAQARQALAGGTSTIGLPSIGGT 391
Query: 168 PMLSNVISSGMXXXXXXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNV 338
PMLSN+ISSG+ G +TSIAGSLP+ NV
Sbjct: 392 PMLSNMISSGITTSIPPAQTVISSGPSGVTSIAGSLPVSATGQVVHNSTPASLISTASNV 451
Query: 339 TGNSSIGMSQSLSNLQASVSMGQTLPSMSQGSLPVPXXXXXXXXXXXXXXXXXXXXXXXX 518
+GN+S+ MSQ S LQ SVS+ QTLP MSQG+ PV
Sbjct: 452 SGNASLTMSQPSSTLQGSVSLSQTLPGMSQGNHPVTQIVQTGMNMNQNMMSGSGASGMPS 511
Query: 519 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNMPLNXXXXXXXXXXXXKYVKVWEGNLSG 698
TNMPLN KY+KVWEGNLSG
Sbjct: 512 GTGTMIPTLGTSQQGQPGMQPVGLNSNNSGTNMPLNQQTSSTVQSAQSKYIKVWEGNLSG 571
Query: 699 QRQGQPVFITRLEGYRSASAS 761
QRQGQPVFITRLEGYRSASAS
Sbjct: 572 QRQGQPVFITRLEGYRSASAS 592
Score = 122 bits (306), Expect(2) = 2e-76
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA+RLIGMLFPGDMVVFKPQ
Sbjct: 623 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQ 682
Query: 989 IPS 997
IP+
Sbjct: 683 IPN 685
>ref|XP_022854372.1| mediator of RNA polymerase II transcription subunit 25 [Olea europaea
var. sylvestris]
Length = 756
Score = 191 bits (484), Expect(2) = 2e-74
Identities = 125/265 (47%), Positives = 139/265 (52%), Gaps = 12/265 (4%)
Frame = +3
Query: 3 MTPNNENVQDMKPLAPTS----RPVGGAAANVRILNDVAQARQALAGGTSIGLPSMGGTP 170
M NNENVQ+MKPL RPVG AAANVRILNDVAQARQ LAGGTSIGLPSMGGTP
Sbjct: 287 MILNNENVQEMKPLVSNVTQPLRPVGVAAANVRILNDVAQARQVLAGGTSIGLPSMGGTP 346
Query: 171 MLSNVISSGM---XXXXXXXXXXXXXGITSIAGSLPIP-TXXXXXXXXXXXXXXXXXXNV 338
MLS++IS+GM G+ S+AGSLP+ T N+
Sbjct: 347 MLSSMISNGMPSSVPPVQTVISSGPPGVASVAGSLPMTGTGQVAQNSVPASFTASTASNM 406
Query: 339 TGNSSIGMSQSLSNLQASVSMGQTLPSMSQGSLPVPXXXXXXXXXXXXXXXXXXXXXXXX 518
+GN +IGMSQ +SNLQ SV+MGQT+ MSQG+LPV
Sbjct: 407 SGNLNIGMSQPMSNLQGSVNMGQTVSGMSQGNLPVTQMVQGGIGMNQNLMNGSGASGMPT 466
Query: 519 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTN----MPLNXXXXXXXXXXXXKYVKVWEG 686
N MPLN KYVKVWEG
Sbjct: 467 GTGTGTGTMIPTPGMSQQIQPGMQPVGVNNNNSAANMPLNQQTSSTVNSAQSKYVKVWEG 526
Query: 687 NLSGQRQGQPVFITRLEGYRSASAS 761
NLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 527 NLSGQRQGQPVFITRLEGYRSASAS 551
Score = 119 bits (297), Expect(2) = 2e-74
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 582 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 641
Query: 989 IPS 997
I S
Sbjct: 642 ISS 644
>ref|XP_020547658.1| mediator of RNA polymerase II transcription subunit 25 isoform X1
[Sesamum indicum]
Length = 796
Score = 186 bits (473), Expect(2) = 3e-74
Identities = 125/269 (46%), Positives = 139/269 (51%), Gaps = 16/269 (5%)
Frame = +3
Query: 3 MTPNNENVQDMKP----LAPTSRPVGGAAANVRILNDVAQARQALAGGTS-IGLPSMGGT 167
M PNN NV D+KP +AP+ RPVG A ANVRILNDVAQARQALAGGTS IGLPS+GGT
Sbjct: 333 MIPNNANVPDVKPSVTNMAPSLRPVG-APANVRILNDVAQARQALAGGTSTIGLPSIGGT 391
Query: 168 PMLSNVISSGMXXXXXXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNV 338
PMLSN+ISSG+ G +TSIAGSLP+ NV
Sbjct: 392 PMLSNMISSGITTSIPPAQTVISSGPSGVTSIAGSLPVSATGQVVHNSTPASLISTASNV 451
Query: 339 TGNSSIGMSQSLSNLQASVSMGQTLPSMSQGSLPVPXXXXXXXXXXXXXXXXXXXXXXXX 518
+GN+S+ MSQ S LQ SVS+ QTLP MSQG+ PV
Sbjct: 452 SGNASLTMSQPSSTLQGSVSLSQTLPGMSQGNHPVTQIVQTGMNMNQNMMSGSGASGMPS 511
Query: 519 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNMPLNXXXXXXXXXXXXKYVKVWEGNLSG 698
TNMPLN KY+KVWEGNLSG
Sbjct: 512 GTGTMIPTLGTSQQGQPGMQPVGLNSNNSGTNMPLNQQTSSTVQSAQSKYIKVWEGNLSG 571
Query: 699 QRQGQPVFITRLE--------GYRSASAS 761
QRQGQPVFITRLE GYRSASAS
Sbjct: 572 QRQGQPVFITRLEVCFTWIRRGYRSASAS 600
Score = 122 bits (306), Expect(2) = 3e-74
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA+RLIGMLFPGDMVVFKPQ
Sbjct: 631 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQ 690
Query: 989 IPS 997
IP+
Sbjct: 691 IPN 693
>ref|XP_020547659.1| mediator of RNA polymerase II transcription subunit 25 isoform X3
[Sesamum indicum]
Length = 774
Score = 186 bits (473), Expect(2) = 3e-74
Identities = 125/269 (46%), Positives = 139/269 (51%), Gaps = 16/269 (5%)
Frame = +3
Query: 3 MTPNNENVQDMKP----LAPTSRPVGGAAANVRILNDVAQARQALAGGTS-IGLPSMGGT 167
M PNN NV D+KP +AP+ RPVG A ANVRILNDVAQARQALAGGTS IGLPS+GGT
Sbjct: 311 MIPNNANVPDVKPSVTNMAPSLRPVG-APANVRILNDVAQARQALAGGTSTIGLPSIGGT 369
Query: 168 PMLSNVISSGMXXXXXXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNV 338
PMLSN+ISSG+ G +TSIAGSLP+ NV
Sbjct: 370 PMLSNMISSGITTSIPPAQTVISSGPSGVTSIAGSLPVSATGQVVHNSTPASLISTASNV 429
Query: 339 TGNSSIGMSQSLSNLQASVSMGQTLPSMSQGSLPVPXXXXXXXXXXXXXXXXXXXXXXXX 518
+GN+S+ MSQ S LQ SVS+ QTLP MSQG+ PV
Sbjct: 430 SGNASLTMSQPSSTLQGSVSLSQTLPGMSQGNHPVTQIVQTGMNMNQNMMSGSGASGMPS 489
Query: 519 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNMPLNXXXXXXXXXXXXKYVKVWEGNLSG 698
TNMPLN KY+KVWEGNLSG
Sbjct: 490 GTGTMIPTLGTSQQGQPGMQPVGLNSNNSGTNMPLNQQTSSTVQSAQSKYIKVWEGNLSG 549
Query: 699 QRQGQPVFITRLE--------GYRSASAS 761
QRQGQPVFITRLE GYRSASAS
Sbjct: 550 QRQGQPVFITRLEVCFTWIRRGYRSASAS 578
Score = 122 bits (306), Expect(2) = 3e-74
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA+RLIGMLFPGDMVVFKPQ
Sbjct: 609 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAHRLIGMLFPGDMVVFKPQ 668
Query: 989 IPS 997
IP+
Sbjct: 669 IPN 671
>gb|KZV35948.1| mediator of RNA polymerase II transcription subunit 25 [Dorcoceras
hygrometricum]
Length = 733
Score = 168 bits (425), Expect(2) = 2e-68
Identities = 114/259 (44%), Positives = 128/259 (49%), Gaps = 6/259 (2%)
Frame = +3
Query: 3 MTPNNENVQDMKPLA----PTSRPVGGAAANVRILNDVAQARQALAGGTSIGLPSMGGTP 170
M PNNE V D KPL P+ RPVGGAAANVRILN VAQARQALAG S+GGTP
Sbjct: 227 MVPNNEIVPDTKPLVNNVTPSLRPVGGAAANVRILNHVAQARQALAG-------SIGGTP 279
Query: 171 MLSNVISSGM--XXXXXXXXXXXXXGITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTG 344
M+SN SSGM +TSI+GSL + N+
Sbjct: 280 MISNTPSSGMNSIPPAPNAIPSGTSSVTSISGSLSMAATVQVGQNSAPASFTSTASNMPV 339
Query: 345 NSSIGMSQSLSNLQASVSMGQTLPSMSQGSLPVPXXXXXXXXXXXXXXXXXXXXXXXXXX 524
NSS+GMSQ LSNLQ +VSMGQT+P M QG+ PV
Sbjct: 340 NSSLGMSQPLSNLQ-NVSMGQTIPGMGQGNPPVSQMVQSGMSLSQNVVSSNGASGMPSGT 398
Query: 525 XXXXXXXXXXXXXXXXXXXXXXXXXXXXTNMPLNXXXXXXXXXXXXKYVKVWEGNLSGQR 704
TNMPLN KYVKVWEGNLSGQR
Sbjct: 399 GAMIPTPGLGQQMQPGMQPVGVNGNSTVTNMPLNQQTANAMQSAQSKYVKVWEGNLSGQR 458
Query: 705 QGQPVFITRLEGYRSASAS 761
QGQPVFIT+LEGYR++SAS
Sbjct: 459 QGQPVFITKLEGYRNSSAS 477
Score = 121 bits (304), Expect(2) = 2e-68
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ
Sbjct: 508 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 567
Query: 989 IPS 997
P+
Sbjct: 568 PPN 570
>ref|XP_012082044.1| mediator of RNA polymerase II transcription subunit 25 isoform X1
[Jatropha curcas]
Length = 842
Score = 124 bits (310), Expect(2) = 8e-41
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 632 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 691
Query: 989 IPS 997
IPS
Sbjct: 692 IPS 694
Score = 73.6 bits (179), Expect(2) = 8e-41
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +3
Query: 612 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 761
NMPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYR+ASAS
Sbjct: 552 NMPLSQQTTSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRNASAS 601
Score = 99.0 bits (245), Expect = 1e-18
Identities = 66/160 (41%), Positives = 89/160 (55%), Gaps = 15/160 (9%)
Frame = +3
Query: 3 MTPNNENVQDMKP----LAPTSRPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPS 155
M N ENV ++KP + + RPV AANV ILN+++QARQ AL GG+SI LPS
Sbjct: 335 MMTNGENVPELKPTVSGMPQSVRPVPPGAANVSILNNLSQARQVMNSAALTGGSSIALPS 394
Query: 156 MGGTPM---LSNVISSGMXXXXXXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXX 317
M TP+ +SN+ISSGM G ITS+ GS +
Sbjct: 395 MNQTPVAMHMSNMISSGMATSVPAAQTVFSSGQPGITSMTGSGTLTGTSQIAPNSGLGSF 454
Query: 318 XXXXXNVTGNSSIGMSQSLSNLQASVSMGQTLPSMSQGSL 437
N++GNS++G+SQ ++NLQ VSMGQ++ MSQG+L
Sbjct: 455 ASSTSNISGNSNLGISQPMANLQGGVSMGQSVSGMSQGNL 494
>ref|XP_012082045.1| mediator of RNA polymerase II transcription subunit 25 isoform X2
[Jatropha curcas]
Length = 720
Score = 124 bits (310), Expect(2) = 8e-41
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 632 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 691
Query: 989 IPS 997
IPS
Sbjct: 692 IPS 694
Score = 73.6 bits (179), Expect(2) = 8e-41
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +3
Query: 612 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 761
NMPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYR+ASAS
Sbjct: 552 NMPLSQQTTSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRNASAS 601
Score = 99.0 bits (245), Expect = 1e-18
Identities = 66/160 (41%), Positives = 89/160 (55%), Gaps = 15/160 (9%)
Frame = +3
Query: 3 MTPNNENVQDMKP----LAPTSRPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPS 155
M N ENV ++KP + + RPV AANV ILN+++QARQ AL GG+SI LPS
Sbjct: 335 MMTNGENVPELKPTVSGMPQSVRPVPPGAANVSILNNLSQARQVMNSAALTGGSSIALPS 394
Query: 156 MGGTPM---LSNVISSGMXXXXXXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXX 317
M TP+ +SN+ISSGM G ITS+ GS +
Sbjct: 395 MNQTPVAMHMSNMISSGMATSVPAAQTVFSSGQPGITSMTGSGTLTGTSQIAPNSGLGSF 454
Query: 318 XXXXXNVTGNSSIGMSQSLSNLQASVSMGQTLPSMSQGSL 437
N++GNS++G+SQ ++NLQ VSMGQ++ MSQG+L
Sbjct: 455 ASSTSNISGNSNLGISQPMANLQGGVSMGQSVSGMSQGNL 494
>gb|OWM86467.1| hypothetical protein CDL15_Pgr026359 [Punica granatum]
Length = 852
Score = 124 bits (311), Expect(2) = 3e-40
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ
Sbjct: 623 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 682
Query: 989 IPS 997
IP+
Sbjct: 683 IPN 685
Score = 71.2 bits (173), Expect(2) = 3e-40
Identities = 35/50 (70%), Positives = 37/50 (74%)
Frame = +3
Query: 612 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 761
NM L+ KY+KVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 543 NMQLSQQPSSALQTAQSKYIKVWEGNLSGQRQGQPVFITRLEGYRSASAS 592
>emb|CDP00585.1| unnamed protein product [Coffea canephora]
Length = 835
Score = 122 bits (305), Expect(2) = 3e-40
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKA RLIGMLFPGDMVVFKPQ
Sbjct: 630 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQ 689
Query: 989 IPS 997
IPS
Sbjct: 690 IPS 692
Score = 73.6 bits (179), Expect(2) = 3e-40
Identities = 37/50 (74%), Positives = 37/50 (74%)
Frame = +3
Query: 612 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 761
NMPL KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 550 NMPLPQQTSNTLPSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 599
Score = 137 bits (345), Expect = 1e-31
Identities = 78/152 (51%), Positives = 95/152 (62%), Gaps = 7/152 (4%)
Frame = +3
Query: 3 MTPNNENVQDMKPLAPTS----RPVGGAAANVRILNDVAQARQALAGGTSIGLPSMGGTP 170
M NEN+Q+MKP+ + RPVG A ANVRILNDVAQARQA GGTS+GL SMGGTP
Sbjct: 341 MVSTNENIQEMKPIVSSMTQSLRPVGAAPANVRILNDVAQARQAFGGGTSMGLQSMGGTP 400
Query: 171 MLSNVISSGM---XXXXXXXXXXXXXGITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVT 341
+LSN+ISSGM G+TS++GS P+ NV+
Sbjct: 401 ILSNMISSGMTSSIPAAQTLISSGQSGVTSVSGSAPVAGNAQGAQNPAPASFPTTTSNVS 460
Query: 342 GNSSIGMSQSLSNLQASVSMGQTLPSMSQGSL 437
G+S++ MSQ LSN Q VSMGQT+PSMSQG+L
Sbjct: 461 GSSNLSMSQPLSNHQGGVSMGQTVPSMSQGNL 492
>ref|XP_022776985.1| mediator of RNA polymerase II transcription subunit 25 [Durio
zibethinus]
Length = 891
Score = 122 bits (306), Expect(2) = 4e-40
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ
Sbjct: 631 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 690
Query: 989 IPS 997
I S
Sbjct: 691 ISS 693
Score = 72.8 bits (177), Expect(2) = 4e-40
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +3
Query: 612 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 761
+MPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 551 SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 600
Score = 98.6 bits (244), Expect = 2e-18
Identities = 65/155 (41%), Positives = 88/155 (56%), Gaps = 14/155 (9%)
Frame = +3
Query: 12 NNENVQDMKP----LAPTSRPVGGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGT 167
+ +NVQ++KP + RPV AAANV ILN+++QAR AL GGTSIGL SMG +
Sbjct: 339 SGDNVQELKPSVSGMTQPLRPVPPAAANVNILNNLSQARVMNSAALTGGTSIGLQSMGQS 398
Query: 168 PM---LSNVISSGMXXXXXXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXX 329
P+ +SN+ISSGM G +TS+ GS +
Sbjct: 399 PVAMHMSNMISSGMASSVPPAQTVFSSGQSGMTSLTGSGALTGTAQVPPNSGLSSFPSAT 458
Query: 330 XNVTGNSSIGMSQSLSNLQASVSMGQTLPSMSQGS 434
NV GNS+IG+SQ + N+Q +VSMGQ++P MSQG+
Sbjct: 459 SNVAGNSNIGISQPMGNVQGAVSMGQSVPGMSQGN 493
>ref|XP_015895700.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
[Ziziphus jujuba]
Length = 821
Score = 124 bits (311), Expect(2) = 5e-40
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ
Sbjct: 617 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 676
Query: 989 IPS 997
IP+
Sbjct: 677 IPN 679
Score = 70.5 bits (171), Expect(2) = 5e-40
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +3
Query: 663 KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 761
KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 554 KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 586
Score = 92.4 bits (228), Expect = 2e-16
Identities = 64/157 (40%), Positives = 85/157 (54%), Gaps = 12/157 (7%)
Frame = +3
Query: 3 MTPNNENVQDMKPL----APTSRPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPS 155
M NN+N D+KP+ + R V A ANV ILN+++QARQ AL GGTSIGL
Sbjct: 336 MITNNDNGPDLKPIVSGVSQPLRSVAPAPANVNILNNLSQARQVMNNAALTGGTSIGLQP 395
Query: 156 MGGTPM---LSNVISSGMXXXXXXXXXXXXXGITSIAGSLPIPTXXXXXXXXXXXXXXXX 326
MG TPM +SN+ISSGM + +G P +
Sbjct: 396 MGQTPMAMHVSNMISSGMTSSMPAAQTGTLSQVAQNSGLGPFTSATS------------- 442
Query: 327 XXNVTGNSSIGMSQSLSNLQASVSMGQTLPSMSQGSL 437
NV+ NS+IG+SQ ++N+Q SVSMGQ++P MSQ +L
Sbjct: 443 --NVSANSNIGISQPMNNVQGSVSMGQSVPGMSQTNL 477
>ref|XP_016666817.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X1 [Gossypium hirsutum]
Length = 842
Score = 121 bits (304), Expect(2) = 7e-40
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTL+LSVSDKAYRLIGMLFPGDMVVFKPQ
Sbjct: 638 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQ 697
Query: 989 IPS 997
I S
Sbjct: 698 ISS 700
Score = 72.8 bits (177), Expect(2) = 7e-40
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +3
Query: 612 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 761
+MPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 558 SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 607
Score = 97.1 bits (240), Expect = 6e-18
Identities = 67/156 (42%), Positives = 91/156 (58%), Gaps = 15/156 (9%)
Frame = +3
Query: 12 NNENVQDMKP----LAPTSRPVGGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGT 167
+++NVQ++KP + RPV AAANV ILN+++QAR AL+GGTSIGL SMG T
Sbjct: 345 SSDNVQEIKPSVGGMTQPLRPVPPAAANVNILNNLSQARVMNSAALSGGTSIGLQSMGQT 404
Query: 168 PM---LSNVISSGMXXXXXXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXX 329
P+ +SN+ISSGM G +TS+ GS +
Sbjct: 405 PVAMHMSNMISSGMTSSVPLAQTVFSSGQSAMTSLPGSGAVTGTTQVPPNSNLNSFASAT 464
Query: 330 XNVTGNSSIGMSQSLSNLQASVSMGQTLP-SMSQGS 434
NV GNS+IG+SQ + N+Q +VSMGQ++P SMSQG+
Sbjct: 465 SNVAGNSNIGISQPMCNVQGAVSMGQSVPGSMSQGN 500
>ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform X1 [Gossypium raimondii]
Length = 840
Score = 121 bits (304), Expect(2) = 7e-40
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTL+LSVSDKAYRLIGMLFPGDMVVFKPQ
Sbjct: 638 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQ 697
Query: 989 IPS 997
I S
Sbjct: 698 ISS 700
Score = 72.8 bits (177), Expect(2) = 7e-40
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +3
Query: 612 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 761
+MPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 558 SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 607
Score = 97.1 bits (240), Expect = 6e-18
Identities = 67/156 (42%), Positives = 91/156 (58%), Gaps = 15/156 (9%)
Frame = +3
Query: 12 NNENVQDMKP----LAPTSRPVGGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGT 167
+++NVQ++KP + RPV AAANV ILN+++QAR AL+GGTSIGL SMG T
Sbjct: 345 SSDNVQEIKPSVGGMTQPLRPVPPAAANVNILNNLSQARVMNSAALSGGTSIGLQSMGQT 404
Query: 168 PM---LSNVISSGMXXXXXXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXX 329
P+ +SN+ISSGM G +TS+ GS +
Sbjct: 405 PVAMHMSNMISSGMTSSVPLAQTVFSSGQSGMTSLPGSGAVTGTTQVPPNSNLNSFASAT 464
Query: 330 XNVTGNSSIGMSQSLSNLQASVSMGQTLP-SMSQGS 434
NV GNS+IG+SQ + N+Q +VSMGQ++P SMSQG+
Sbjct: 465 SNVAGNSNIGISQPMCNVQGAVSMGQSVPGSMSQGN 500
>ref|XP_016666818.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X2 [Gossypium hirsutum]
Length = 836
Score = 121 bits (304), Expect(2) = 7e-40
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTL+LSVSDKAYRLIGMLFPGDMVVFKPQ
Sbjct: 632 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQ 691
Query: 989 IPS 997
I S
Sbjct: 692 ISS 694
Score = 72.8 bits (177), Expect(2) = 7e-40
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +3
Query: 612 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 761
+MPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 552 SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 601
Score = 97.1 bits (240), Expect = 6e-18
Identities = 67/156 (42%), Positives = 91/156 (58%), Gaps = 15/156 (9%)
Frame = +3
Query: 12 NNENVQDMKP----LAPTSRPVGGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGT 167
+++NVQ++KP + RPV AAANV ILN+++QAR AL+GGTSIGL SMG T
Sbjct: 339 SSDNVQEIKPSVGGMTQPLRPVPPAAANVNILNNLSQARVMNSAALSGGTSIGLQSMGQT 398
Query: 168 PM---LSNVISSGMXXXXXXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXX 329
P+ +SN+ISSGM G +TS+ GS +
Sbjct: 399 PVAMHMSNMISSGMTSSVPLAQTVFSSGQSAMTSLPGSGAVTGTTQVPPNSNLNSFASAT 458
Query: 330 XNVTGNSSIGMSQSLSNLQASVSMGQTLP-SMSQGS 434
NV GNS+IG+SQ + N+Q +VSMGQ++P SMSQG+
Sbjct: 459 SNVAGNSNIGISQPMCNVQGAVSMGQSVPGSMSQGN 494
>ref|XP_017621524.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform X1 [Gossypium arboreum]
Length = 834
Score = 121 bits (304), Expect(2) = 7e-40
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTL+LSVSDKAYRLIGMLFPGDMVVFKPQ
Sbjct: 638 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQ 697
Query: 989 IPS 997
I S
Sbjct: 698 ISS 700
Score = 72.8 bits (177), Expect(2) = 7e-40
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +3
Query: 612 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 761
+MPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 558 SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 607
Score = 95.1 bits (235), Expect = 2e-17
Identities = 66/156 (42%), Positives = 90/156 (57%), Gaps = 15/156 (9%)
Frame = +3
Query: 12 NNENVQDMKP----LAPTSRPVGGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGT 167
+++NVQ++KP + RPV AAANV ILN+++QAR AL+GGTSIGL SMG T
Sbjct: 345 SSDNVQEIKPSVGGMTQPLRPVPPAAANVNILNNLSQARVMNSAALSGGTSIGLQSMGQT 404
Query: 168 PM---LSNVISSGMXXXXXXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXX 329
P+ +SN+ISSGM G +TS+ GS +
Sbjct: 405 PVAMHMSNMISSGMTSSVPLAQTVFSSGQSAMTSLPGSGAVTGTTQVPPNSNLNSFASAT 464
Query: 330 XNVTGNSSIGMSQSLSNLQASVSMGQTLP-SMSQGS 434
NV GNS+IG+SQ + N+Q +VSMGQ++P SMS G+
Sbjct: 465 SNVAGNSNIGISQPMCNVQGAVSMGQSVPGSMSHGN 500
>ref|XP_012478636.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform X2 [Gossypium raimondii]
gb|KJB30337.1| hypothetical protein B456_005G138200 [Gossypium raimondii]
Length = 834
Score = 121 bits (304), Expect(2) = 7e-40
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTL+LSVSDKAYRLIGMLFPGDMVVFKPQ
Sbjct: 632 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQ 691
Query: 989 IPS 997
I S
Sbjct: 692 ISS 694
Score = 72.8 bits (177), Expect(2) = 7e-40
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +3
Query: 612 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 761
+MPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 552 SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 601
Score = 97.1 bits (240), Expect = 6e-18
Identities = 67/156 (42%), Positives = 91/156 (58%), Gaps = 15/156 (9%)
Frame = +3
Query: 12 NNENVQDMKP----LAPTSRPVGGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGT 167
+++NVQ++KP + RPV AAANV ILN+++QAR AL+GGTSIGL SMG T
Sbjct: 339 SSDNVQEIKPSVGGMTQPLRPVPPAAANVNILNNLSQARVMNSAALSGGTSIGLQSMGQT 398
Query: 168 PM---LSNVISSGMXXXXXXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXX 329
P+ +SN+ISSGM G +TS+ GS +
Sbjct: 399 PVAMHMSNMISSGMTSSVPLAQTVFSSGQSGMTSLPGSGAVTGTTQVPPNSNLNSFASAT 458
Query: 330 XNVTGNSSIGMSQSLSNLQASVSMGQTLP-SMSQGS 434
NV GNS+IG+SQ + N+Q +VSMGQ++P SMSQG+
Sbjct: 459 SNVAGNSNIGISQPMCNVQGAVSMGQSVPGSMSQGN 494
>ref|XP_017621525.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
isoform X2 [Gossypium arboreum]
gb|KHG24986.1| Mediator of RNA polymerase II transcription subunit 25 [Gossypium
arboreum]
Length = 828
Score = 121 bits (304), Expect(2) = 7e-40
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +2
Query: 809 ADFLVFRAMDQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAYRLIGMLFPGDMVVFKPQ 988
ADFLVFRAM+QHGFLGQLQEKKLCAVIQLPSQTL+LSVSDKAYRLIGMLFPGDMVVFKPQ
Sbjct: 632 ADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLMLSVSDKAYRLIGMLFPGDMVVFKPQ 691
Query: 989 IPS 997
I S
Sbjct: 692 ISS 694
Score = 72.8 bits (177), Expect(2) = 7e-40
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +3
Query: 612 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 761
+MPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 552 SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 601
Score = 95.1 bits (235), Expect = 2e-17
Identities = 66/156 (42%), Positives = 90/156 (57%), Gaps = 15/156 (9%)
Frame = +3
Query: 12 NNENVQDMKP----LAPTSRPVGGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGT 167
+++NVQ++KP + RPV AAANV ILN+++QAR AL+GGTSIGL SMG T
Sbjct: 339 SSDNVQEIKPSVGGMTQPLRPVPPAAANVNILNNLSQARVMNSAALSGGTSIGLQSMGQT 398
Query: 168 PM---LSNVISSGMXXXXXXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXX 329
P+ +SN+ISSGM G +TS+ GS +
Sbjct: 399 PVAMHMSNMISSGMTSSVPLAQTVFSSGQSAMTSLPGSGAVTGTTQVPPNSNLNSFASAT 458
Query: 330 XNVTGNSSIGMSQSLSNLQASVSMGQTLP-SMSQGS 434
NV GNS+IG+SQ + N+Q +VSMGQ++P SMS G+
Sbjct: 459 SNVAGNSNIGISQPMCNVQGAVSMGQSVPGSMSHGN 494