BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00011278
         (1909 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP72325.1| Retrovirus-related Pol polyprotein from transposo...   680   0.0  
gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposo...   634   0.0  
gb|EEE51974.1| hypothetical protein OsJ_33644 [Oryza sativa Japo...   539   0.0  
gb|ABA94191.1| retrotransposon protein, putative, Ty1-copia subc...   547   e-180
gb|KZV50107.1| hypothetical protein F511_31489, partial [Dorcoce...   542   e-179
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc...   550   e-178
gb|AAV31347.1| putative polyprotein [Oryza sativa Japonica Group]     543   e-178
gb|KZV23924.1| hypothetical protein F511_22499 [Dorcoceras hygro...   536   e-178
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   543   e-177
gb|KZV39555.1| hypothetical protein F511_13790, partial [Dorcoce...   544   e-177
gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]     547   e-177
gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subc...   543   e-177
gb|PHT56189.1| hypothetical protein CQW23_04675 [Capsicum baccatum]   535   e-177
gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subc...   543   e-176
gb|AAS01934.1| putative Integrase core domain containing protein...   541   e-176
gb|KZV26201.1| hypothetical protein F511_28547 [Dorcoceras hygro...   535   e-176
gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Jap...   545   e-176
gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subc...   541   e-176
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         545   e-176
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc...   545   e-176

>gb|KYP72325.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 565

 Score =  680 bits (1755), Expect = 0.0
 Identities = 329/431 (76%), Positives = 376/431 (87%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SDICDSN V+TRGG +YFITFIDDFSKYCYVYLI  KS LF+KFK YKAEVENQLEK IK
Sbjct: 86   SDICDSNGVITRGGKKYFITFIDDFSKYCYVYLIIHKSELFEKFKVYKAEVENQLEKSIK 145

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
            ILRSDRGGEY+S+EM +F + HGI+HEVTP Y+PQSNG+AERKNRTLLDM+NAML+SSGL
Sbjct: 146  ILRSDRGGEYSSNEMGEFFETHGIIHEVTPPYAPQSNGIAERKNRTLLDMINAMLISSGL 205

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            P N WGEAL++AC ILNR+PYKNSDKTPYELWKN+KP LK+LKVWGCLAKVNIPI KKRK
Sbjct: 206  PDNLWGEALFTACHILNRIPYKNSDKTPYELWKNRKPNLKYLKVWGCLAKVNIPINKKRK 265

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLSRPV 720
            IGPKT+DCVF+GYSL+S TYRFLV NSEV EISNNII+ESRDAVFFENIFP+K+KLS+PV
Sbjct: 266  IGPKTVDCVFLGYSLHSTTYRFLVINSEVSEISNNIIMESRDAVFFENIFPLKNKLSKPV 325

Query: 721  GACSSSNDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTYNDAMLSLDA 900
               SSS   +SS         EPR SKR RKAK+FG +FY FLLEDDPKTY++AM S+DA
Sbjct: 326  YDTSSSVLPSSSTV---NKDFEPRISKRIRKAKDFGPEFYSFLLEDDPKTYSEAMRSVDA 382

Query: 901  PFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGF 1080
            PFWKEA+NDE++SL INKTW LTDLPPGCK IG KW+F+KKLR DGSI+K+KARLVV G+
Sbjct: 383  PFWKEAINDEIDSLKINKTWFLTDLPPGCKSIGCKWVFRKKLRTDGSIDKFKARLVVIGY 442

Query: 1081 EQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEEEIYMNQPKG 1260
            +Q  G+DFFDTYSPVSK+TTIR+LIA+A V+ L IHQMDVKTAFLNGDLEEEIYMNQP+G
Sbjct: 443  KQVEGVDFFDTYSPVSKVTTIRVLIALACVFNLEIHQMDVKTAFLNGDLEEEIYMNQPEG 502

Query: 1261 FVVADEEKKIC 1293
            F+    E K+C
Sbjct: 503  FIEPGMENKVC 513


>gb|KYP33726.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 880

 Score =  634 bits (1634), Expect = 0.0
 Identities = 315/443 (71%), Positives = 368/443 (83%), Gaps = 5/443 (1%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SDICDSN V+TRGG +YFITFIDDFSKYCYVYLI  KS LF+KFK YKAEVENQLE+ IK
Sbjct: 416  SDICDSNGVITRGGKKYFITFIDDFSKYCYVYLIIHKSELFEKFKVYKAEVENQLERSIK 475

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
            ILRSDRGGEY+S+EM +F + HGI+HEVTP Y+PQSNG+AERKNRTLLDM+NAML+SSGL
Sbjct: 476  ILRSDRGGEYSSNEMGEFFETHGIIHEVTPPYAPQSNGIAERKNRTLLDMINAMLISSGL 535

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            P N WGEAL++AC ILNR+PYKNSDKTPYELWKN+KP LK+LKVWGCLAKVNIPI KKRK
Sbjct: 536  PDNLWGEALFTACHILNRIPYKNSDKTPYELWKNRKPNLKYLKVWGCLAKVNIPINKKRK 595

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLSRPV 720
            IGPKT+DCVF+GYSL+S TYRFLV  SEV EISNNII+ESRDA+FFENIFP+K+KLS+PV
Sbjct: 596  IGPKTVDCVFLGYSLHSTTYRFLVIKSEVSEISNNIIMESRDAIFFENIFPLKNKLSKPV 655

Query: 721  GACSSSNDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTYNDAMLSLDA 900
               SSS   +SS         E R SKR RKAK+FG  FY FLLE+DPKTY++AM  +DA
Sbjct: 656  YDTSSSILPSSSTV---NKDFETRISKRIRKAKDFGPGFYSFLLENDPKTYSEAMRYVDA 712

Query: 901  PFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGF 1080
            PFWKEA+NDE++SL INKTW LTDL PGCK IG KW+F+KKLR DGSI+K+KARLVV G+
Sbjct: 713  PFWKEAINDEIDSLKINKTWFLTDLSPGCKSIGCKWVFRKKLRTDGSIDKFKARLVVIGY 772

Query: 1081 EQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDL----EEEIYMN 1248
            +Q  G+DFFDTYSPVSK+TTIR+LIA+A V+ L IHQMDVKTAFLNGD+         +N
Sbjct: 773  KQVEGVDFFDTYSPVSKVTTIRVLIALACVFNLEIHQMDVKTAFLNGDILIFGNNLHVIN 832

Query: 1249 QPKGFVVAD-EEKKICFPDVLEG 1314
              K F+ ++ E K +   DV+ G
Sbjct: 833  DVKSFLSSNFEMKDLGLVDVILG 855


>gb|EEE51974.1| hypothetical protein OsJ_33644 [Oryza sativa Japonica Group]
          Length = 679

 Score =  539 bits (1389), Expect = 0.0
 Identities = 258/440 (58%), Positives = 336/440 (76%), Gaps = 9/440 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 235  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 294

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             LRS+RGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 295  RLRSNRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 354

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            PK  WGEAL ++  +LNRVP +N +KTPYE+W  +KP+L +L+ WGCLAKVN+PI KKRK
Sbjct: 355  PKAWWGEALLTSNHVLNRVPNRNKNKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 414

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLS--- 711
            +GPKT+DCVF+GY+ +S  YRFL+  SEVP++    I+ESRDA FFE+ FPMKD  S   
Sbjct: 415  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 474

Query: 712  RPVGACSSS------NDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTY 873
            +P     SS       ++        + S  PRRSKR R AK+FGDDF ++L++D PK+ 
Sbjct: 475  QPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSI 534

Query: 874  NDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKY 1053
            ++A  S DA +WKEAV  EM+S+  N TW +T+ P GCKP+G KW+FKKKLR DG+IEKY
Sbjct: 535  SEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKY 594

Query: 1054 KARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEE 1233
            KARLV KG+ QK G DFFDTYSPV+++TTIR+L+++A+ + L +HQMDVKTAFLNG+L+E
Sbjct: 595  KARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDE 654

Query: 1234 EIYMNQPKGFVVADEEKKIC 1293
            EIYM+QP GFVV  +E K+C
Sbjct: 655  EIYMDQPDGFVVEGQEGKVC 674


>gb|ABA94191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1060

 Score =  547 bits (1410), Expect = e-180
 Identities = 267/481 (55%), Positives = 354/481 (73%), Gaps = 12/481 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SD+C+ N VLT+GG +YF+TFIDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 363  SDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 422

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 423  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 482

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +KP+L +L+ WGCLAKVN+PI KKRK
Sbjct: 483  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 542

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLS--- 711
            +GPKT+DCVF+GY+ +S  YRFL+  SEVP+++   I+ESRDA+FFE+ FPMKD  S   
Sbjct: 543  LGPKTVDCVFLGYAYHSIAYRFLIVKSEVPDMNVGTIMESRDAIFFESFFPMKDTHSGSN 602

Query: 712  RPVGACSSS------NDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTY 873
            +P     SS       ++        + S  PRRSKR R AK+FGDDF ++L++D PK+ 
Sbjct: 603  QPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSI 662

Query: 874  NDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKY 1053
            ++A  S DA +WKEAV  EM+S+  N TW +T+ P GCKP+G KW+FKKKLR DG+IEKY
Sbjct: 663  SEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKY 722

Query: 1054 KARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEE 1233
            KARLV KG+ QK G DFFDTYSPV+++T IR+L+++A+ + L +HQMDVKTAFLNG+L+E
Sbjct: 723  KARLVAKGYTQKEGEDFFDTYSPVARLTIIRVLLSLAASHGLLVHQMDVKTAFLNGELDE 782

Query: 1234 EIYMNQPKGFVVADEEKKIC-FPDVLEGYSDA--NWITDSEETKSTSGYVFTLAGGAISW 1404
            EIYM+QP GFVV  +E K+C     L G   A   W    ++T +++G+    A   + +
Sbjct: 783  EIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYY 842

Query: 1405 K 1407
            +
Sbjct: 843  R 843



 Score = 84.3 bits (207), Expect = 5e-13
 Identities = 36/52 (69%), Positives = 46/52 (88%)
 Frame = +1

Query: 1294 FPDVLEGYSDANWITDSEETKSTSGYVFTLAGGAISWKSAKQTVISRSTMEA 1449
            +P VLEGYSD+NWI+D +E K+TS YVFTL GGA+SW+S KQT+++RSTMEA
Sbjct: 1009 YPAVLEGYSDSNWISDVDEIKATSAYVFTLGGGAVSWRSCKQTILTRSTMEA 1060


>gb|KZV50107.1| hypothetical protein F511_31489, partial [Dorcoceras hygrometricum]
          Length = 912

 Score =  542 bits (1396), Expect = e-179
 Identities = 265/460 (57%), Positives = 342/460 (74%), Gaps = 3/460 (0%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            +D+CD   V TRGG +YFITFIDD ++YCYVYL+ +K    + F +YK EVENQL  KIK
Sbjct: 447  TDVCDLKLVQTRGGKRYFITFIDDCTRYCYVYLLRSKVEAIEAFTKYKNEVENQLTSKIK 506

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
            ++RSDRGGEY +    +FC   GI+H+ T  YSPQSNGVAERKNRTL +M+NA+L +SGL
Sbjct: 507  MIRSDRGGEYVAP-FEEFCSNSGIIHQTTAPYSPQSNGVAERKNRTLKEMMNALLTNSGL 565

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            P+N WGEA+ +A  ILN++P+K  D+TPYELWK +K + K+LKVWGCLAKV IP  K+ K
Sbjct: 566  PQNLWGEAILTANHILNKIPHKGKDETPYELWKGRKSSYKYLKVWGCLAKVEIPKPKQVK 625

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLSRPV 720
            IGPKTIDCVF+GY+LNS  YRFLV  SE+ +IS   I+ESR+AVFFE  FP K+K     
Sbjct: 626  IGPKTIDCVFIGYALNSSAYRFLVHKSEISDISEGTILESRNAVFFEYKFPCKEKKE--- 682

Query: 721  GACSSSNDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTYNDAMLSLDA 900
               SS+          +E + EPRRSKR+R  K+FG +F  ++L+D+P+T  +A+ + +A
Sbjct: 683  ---SSTKSAYEITIESSETNDEPRRSKRARIEKSFGPEFLTYILDDEPQTIQEALSNPEA 739

Query: 901  PFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGF 1080
            PFWKEA+ DE++S+  N TW LTDLPPGCKP+G KWI K+K + DGSI+KYKARLV KGF
Sbjct: 740  PFWKEAIQDEIDSIMHNHTWELTDLPPGCKPLGCKWILKRKYKEDGSIDKYKARLVAKGF 799

Query: 1081 EQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEEEIYMNQPKG 1260
             QK G DFFDTYSPV++IT+IR+LIAIA++++L IHQMDVKTAFLNG+LEEEIYM QP+G
Sbjct: 800  RQKEGYDFFDTYSPVTRITSIRVLIAIAALHELEIHQMDVKTAFLNGELEEEIYMEQPEG 859

Query: 1261 FVVADEEKKIC-FPDVLEGYSDA--NWITDSEETKSTSGY 1371
            FV+  +EKK+C     L G   A   W    + T  ++G+
Sbjct: 860  FVIPGQEKKVCKLVKSLYGLKQAPKQWHEKFDSTMKSNGF 899


>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1287

 Score =  550 bits (1416), Expect = e-178
 Identities = 268/481 (55%), Positives = 355/481 (73%), Gaps = 12/481 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SD+C+ N VLT+GG +YF+TFIDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 456  SDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 515

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             LRSDRGGE+ S+E   FC+ HGI+HE+TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 516  RLRSDRGGEFFSNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 575

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +KP+L +L+ WGCLAKVN+PI KKRK
Sbjct: 576  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 635

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLS--- 711
            +GPKT+DCVF+GY+ +S  YRFL+  SEVP++    I+ESRDA+FFE+ FPMKD  S   
Sbjct: 636  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDAIFFESFFPMKDTHSGSN 695

Query: 712  RPVGACSSS------NDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTY 873
            +P     SS       ++        + S  PRRSKR R AK+FGDDF ++L++D PK+ 
Sbjct: 696  QPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSI 755

Query: 874  NDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKY 1053
            ++A  S DA +WKEAV  EM+S+  N TW +T+ P GCKP+G KW+FKKKLR DG+IEKY
Sbjct: 756  SEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKY 815

Query: 1054 KARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEE 1233
            KARLV KG+ QK G DFFDTYSPV+++TTIR+L+++A+ + L +HQMDVKTAFLNG+L+E
Sbjct: 816  KARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDE 875

Query: 1234 EIYMNQPKGFVVADEEKKIC-FPDVLEGYSDA--NWITDSEETKSTSGYVFTLAGGAISW 1404
            EIYM+QP GFVV  +E K+C     L G   A   W    ++T +++G+    A   + +
Sbjct: 876  EIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYY 935

Query: 1405 K 1407
            +
Sbjct: 936  R 936



 Score =  114 bits (286), Expect = 1e-22
 Identities = 53/91 (58%), Positives = 66/91 (72%)
 Frame = +1

Query: 1294 FPDVLEGYSDANWITDSEETKSTSGYVFTLAGGAISWKSAKQTVISRSTMEAELIALDAA 1473
            +P VLEGYSD+NWI+D +E K+TSGYVFTL GGA+SW+S KQT+++RSTMEAEL ALD A
Sbjct: 1102 YPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTA 1161

Query: 1474 CTEAEWLKSFLNDXXXXXXXXXXXXXHCDSQ 1566
              EAEWL+  L D             +CD+Q
Sbjct: 1162 TVEAEWLRDLLMDLPVVEKPVPAILMNCDNQ 1192


>gb|AAV31347.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1059

 Score =  543 bits (1399), Expect = e-178
 Identities = 260/440 (59%), Positives = 336/440 (76%), Gaps = 9/440 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 604  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 663

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 664  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 723

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +KP+L +L+ WGCLAKVN+PI KKRK
Sbjct: 724  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 783

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLS--- 711
            +GPKT+DCVF+GY+ +S  YRFL+  SEVP++    I+ESRDA FFE+ FPMKD  S   
Sbjct: 784  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 843

Query: 712  RPVGACSSS------NDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTY 873
            +P     SS       ++        + S  PRRSKR R AK+FGDDF ++L++D PK+ 
Sbjct: 844  QPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSI 903

Query: 874  NDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKY 1053
            ++A  S DA +WKEAV  EM+S+  N TW +T+ P GCKP+G KW+FKKKLR DG+IEKY
Sbjct: 904  SEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKY 963

Query: 1054 KARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEE 1233
            KARLV KG+ QK G DFFDTYSPV+++TTIR+L+++A+ + L +HQMDVKTAFLNG+L+E
Sbjct: 964  KARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDE 1023

Query: 1234 EIYMNQPKGFVVADEEKKIC 1293
            EIYM+QP GFVV  +E K+C
Sbjct: 1024 EIYMDQPDGFVVEGQEGKVC 1043


>gb|KZV23924.1| hypothetical protein F511_22499 [Dorcoceras hygrometricum]
          Length = 885

 Score =  536 bits (1382), Expect = e-178
 Identities = 260/443 (58%), Positives = 328/443 (74%), Gaps = 12/443 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SDICD   V TRGG +YF+TFIDD ++YCYVYL+  K    + F+ YKAEVENQL+++IK
Sbjct: 422  SDICDLKFVQTRGGKKYFVTFIDDCTRYCYVYLLRGKDEALEAFQNYKAEVENQLDQRIK 481

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             +RSDRGGEY +    D+C   GI+H+ T  YSPQSNGVAERKNRTL +M+NA+L++SGL
Sbjct: 482  NIRSDRGGEYGAP-FDDYCVKSGIIHQTTAPYSPQSNGVAERKNRTLKEMMNALLINSGL 540

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            P+N WGEA+ SA  ILN++P K  DKTPYELWK  KP+ K+LKVWGCLAKV +P  K+ K
Sbjct: 541  PQNLWGEAILSANHILNKIPQKKKDKTPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQVK 600

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKD---KLS 711
            IGPKT D +F+GY+ NS  YRFLV  S++P I  +  IESR+A+FFEN+FP K+   K  
Sbjct: 601  IGPKTFDGIFIGYANNSSAYRFLVHKSDIPSIHEDTTIESRNAIFFENVFPRKEGNNKER 660

Query: 712  RPVGACSSSNDNNSSPTIFNEASIE---------PRRSKRSRKAKNFGDDFYIFLLEDDP 864
              +     SN+N  S    N+ SIE         PRRSKR+R  K+F  DF  ++LE++P
Sbjct: 661  NEIQRNEGSNENEKSEPSCNKRSIEAVDDQDHDEPRRSKRARIEKSFSPDFISYVLENEP 720

Query: 865  KTYNDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSI 1044
            +T  +A+ S DAP WKEAVN E+ S+  N TW L DLPPG KP+G KWI K+K + DG+I
Sbjct: 721  RTLKEALSSPDAPLWKEAVNSEIESIMHNHTWELVDLPPGTKPLGCKWILKRKYKADGTI 780

Query: 1045 EKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGD 1224
            +KYKARLV KGF QK GID+FDTYSPV++IT+IRM IAIA+++ L IHQMDVKTAFLNG+
Sbjct: 781  DKYKARLVAKGFRQKEGIDYFDTYSPVTRITSIRMFIAIAALHDLEIHQMDVKTAFLNGE 840

Query: 1225 LEEEIYMNQPKGFVVADEEKKIC 1293
            LEEEIYM QP+GFV   +EKK+C
Sbjct: 841  LEEEIYMEQPEGFVAPGKEKKVC 863


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  543 bits (1398), Expect = e-177
 Identities = 266/481 (55%), Positives = 351/481 (72%), Gaps = 12/481 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 288  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDETLDYFKIYKAEVENQLDRKIK 347

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             LRSDRGGE+ S+E   FC+ HGI+HE  P YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 348  RLRSDRGGEFFSNEFDLFCEEHGIIHERKPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 407

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +KP+L +L+ WGCLAKVN+PI KKRK
Sbjct: 408  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 467

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLS--- 711
            +GPKT+DCVF+GY+ +S  YRFL+  SEVP++    I+ESRDA FFE+ FPMKD  S   
Sbjct: 468  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 527

Query: 712  RPVGACSSS------NDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTY 873
            +P     SS       ++        + S  PRRSKR R AK+FGDDF ++L++D PK+ 
Sbjct: 528  QPFEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSI 587

Query: 874  NDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKY 1053
            ++A  S DA +WKEAV  EM+S+  N TW +T+ P GCKP+G KW+FKKKLR DG+IEKY
Sbjct: 588  SEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKY 647

Query: 1054 KARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEE 1233
            KARLV KG+ QK G DFFDTYSPV+++TTIR+L+++A+ + L +HQMDVKTAFLNG+L+E
Sbjct: 648  KARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDE 707

Query: 1234 EIYMNQPKGFVVADEEKKIC-FPDVLEGYSDA--NWITDSEETKSTSGYVFTLAGGAISW 1404
            EIYM+QP GFVV  +E K+C     L G   A   W    ++T +++G+    A   + +
Sbjct: 708  EIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYY 767

Query: 1405 K 1407
            +
Sbjct: 768  R 768



 Score =  169 bits (427), Expect = 3e-40
 Identities = 83/162 (51%), Positives = 111/162 (68%), Gaps = 1/162 (0%)
 Frame = +1

Query: 1294 FPDVLEGYSDANWITDSEETKSTSGYVFTLAGGAISWKSAKQTVISRSTMEAELIALDAA 1473
            +P VLEGYSD+NWI+D +E K+TSGYVFTL GGA+SW+S KQT+++RSTMEAEL ALD A
Sbjct: 934  YPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTA 993

Query: 1474 CTEAEWLKSFLNDXXXXXXXXXXXXXHCDSQVAIARAKSKNYNEK-RRHLTVRHKSIRHL 1650
              EAEWL+  L D             +CD+Q  I +  S   N K  RH+  R KS+R L
Sbjct: 994  TVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKL 1053

Query: 1651 ISHGVISLDFVRSENNIADPLTKGLARQQVLQSSRGMGLEPI 1776
             + GVI+LD++++  N+ADP TKGL+R  +  +S+ MGL P+
Sbjct: 1054 RNSGVITLDYIQTARNLADPFTKGLSRNVINNASKEMGLRPM 1095


>gb|KZV39555.1| hypothetical protein F511_13790, partial [Dorcoceras hygrometricum]
          Length = 1165

 Score =  544 bits (1401), Expect = e-177
 Identities = 265/460 (57%), Positives = 343/460 (74%), Gaps = 3/460 (0%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            +D+CD   V TRGG +YFITFIDD ++YCYVYL+ +K    + F +YK EVENQL  KIK
Sbjct: 476  TDVCDLKLVQTRGGKRYFITFIDDCTRYCYVYLLRSKDEAIEAFTKYKNEVENQLTSKIK 535

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
            ++RSDRGGEY +    +FC   GI+H+ T  YSPQSNGVAERKNRTL +M+NA+L +SGL
Sbjct: 536  MIRSDRGGEYVAP-FEEFCSNSGIIHQTTAPYSPQSNGVAERKNRTLKEMMNALLTNSGL 594

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            P+N WGEA+ +A  ILN++P+K  ++TPYELWK +KP+ K+LKVWGCLAKV IP  K+ K
Sbjct: 595  PQNLWGEAILTANHILNKIPHKGKNETPYELWKGRKPSYKYLKVWGCLAKVEIPKPKQVK 654

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLSRPV 720
            IGPKTIDCVF+GY+LNS  YRFLV  SE+ +IS   I+ESR+AVFFE  FP K+K     
Sbjct: 655  IGPKTIDCVFIGYALNSSAYRFLVHKSEISDISEGTILESRNAVFFEYKFPCKEKKE--- 711

Query: 721  GACSSSNDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTYNDAMLSLDA 900
               SS+          +E + EPRRSKR+R  K+FG +F  ++L+D+P+T  +A+ + +A
Sbjct: 712  ---SSTKSAYEITIESSETNDEPRRSKRARIEKSFGPEFLTYILDDEPQTIQEALSNPEA 768

Query: 901  PFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGF 1080
            PFWKEA+ DE++S+  N TW LTDLPPGCKP+G KWI K+K + DGSI+KYKARLV KGF
Sbjct: 769  PFWKEAIQDEIDSIMHNHTWELTDLPPGCKPLGCKWILKRKYKEDGSIDKYKARLVAKGF 828

Query: 1081 EQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEEEIYMNQPKG 1260
             QK G DFFDTYSPV++IT+IR+LIAIA++++L IHQMDVKTAFLNG+LEEEIYM QP+G
Sbjct: 829  RQKEGYDFFDTYSPVTRITSIRVLIAIAALHELEIHQMDVKTAFLNGELEEEIYMEQPEG 888

Query: 1261 FVVADEEKKIC-FPDVLEGYSDA--NWITDSEETKSTSGY 1371
            FV+  +EKK+C     L G   A   W    + T  ++G+
Sbjct: 889  FVIPGQEKKVCKLVKSLYGLKQAPKQWHEKFDSTMKSNGF 928



 Score = 96.3 bits (238), Expect = 9e-17
 Identities = 43/60 (71%), Positives = 55/60 (91%)
 Frame = +1

Query: 1294 FPDVLEGYSDANWITDSEETKSTSGYVFTLAGGAISWKSAKQTVISRSTMEAELIALDAA 1473
            +P VLEGY DANWI+D++++KSTSGYVFT+ GGA+SWKS+KQT I+RSTME++LIALD A
Sbjct: 1106 YPAVLEGYCDANWISDTKDSKSTSGYVFTIGGGAVSWKSSKQTCIARSTMESKLIALDKA 1165


>gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1289

 Score =  547 bits (1409), Expect = e-177
 Identities = 268/481 (55%), Positives = 353/481 (73%), Gaps = 12/481 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SD+C+ N VLT+GG +YF+TFIDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            PK  WGEAL ++  +LNRVP +N DKTPYE+W ++KP+L +L+ WGCLAKVN+PI KKRK
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIDRKPSLSYLRTWGCLAKVNVPITKKRK 674

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLS--- 711
            +GPKT+DCVF+GY+ +S  YRFL+  SEVP++    I+ESRDA FFE+ FPMKD  S   
Sbjct: 675  LGPKTVDCVFLGYAYHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 734

Query: 712  RPVGACSSS------NDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTY 873
            +P     SS       ++        + S  PRRSKR R AK+FGDDF ++L++D PK+ 
Sbjct: 735  QPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSI 794

Query: 874  NDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKY 1053
            ++A  S DA +WKEAV  EM+S+  N TW +T+ P GCKP+G KW+FKKKLR DG+IEKY
Sbjct: 795  SEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKY 854

Query: 1054 KARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEE 1233
            KARLV KG+ QK G DFFDTYSPV+++TTIR+L+++A+ + L +HQMDVKTAFLNG+L+E
Sbjct: 855  KARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDE 914

Query: 1234 EIYMNQPKGFVVADEEKKIC-FPDVLEGYSDA--NWITDSEETKSTSGYVFTLAGGAISW 1404
            EIYM QP GFVV  +E K+C     L G   A   W    ++T +++G+    A   + +
Sbjct: 915  EIYMYQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYY 974

Query: 1405 K 1407
            +
Sbjct: 975  R 975



 Score =  114 bits (286), Expect = 1e-22
 Identities = 53/91 (58%), Positives = 66/91 (72%)
 Frame = +1

Query: 1294 FPDVLEGYSDANWITDSEETKSTSGYVFTLAGGAISWKSAKQTVISRSTMEAELIALDAA 1473
            +P VLEGYSD+NWI+D +E K+TSGYVFTL GGA+SW+S KQT+++RSTMEAEL ALD A
Sbjct: 1141 YPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTA 1200

Query: 1474 CTEAEWLKSFLNDXXXXXXXXXXXXXHCDSQ 1566
              EAEWL+  L D             +CD+Q
Sbjct: 1201 TVEAEWLRDLLMDLPVVEKPVPAILMNCDNQ 1231


>gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1151

 Score =  543 bits (1398), Expect = e-177
 Identities = 266/481 (55%), Positives = 352/481 (73%), Gaps = 12/481 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 366  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 425

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 426  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 485

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +KP+L +L+ WGCLAKVN+PI KKRK
Sbjct: 486  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 545

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLS--- 711
            +GPKT+DCVF+GY+ +S  YRFL+  SEVP++    I+ESRDA FFE+ FPMKD  S   
Sbjct: 546  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 605

Query: 712  RPVGACSSS------NDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTY 873
            +P     SS       ++        + S  PRRSKR R AK+FGDDF ++L++D PK+ 
Sbjct: 606  QPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSI 665

Query: 874  NDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKY 1053
            ++A  S DA +WKEAV  EM+S+  N TW +T+ P GCKP+G KW+FKKKLR +G+IEKY
Sbjct: 666  SEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPNGTIEKY 725

Query: 1054 KARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEE 1233
            KARLV KG+ QK G DFFDTYSPV+++TTIR+L+++A+ + L +HQMDVKTAFLNG+L+E
Sbjct: 726  KARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDE 785

Query: 1234 EIYMNQPKGFVVADEEKKIC-FPDVLEGYSDA--NWITDSEETKSTSGYVFTLAGGAISW 1404
            EIYM+QP GFVV  +E K+C     L G   A   W    ++T +++G+    A   + +
Sbjct: 786  EIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYY 845

Query: 1405 K 1407
            +
Sbjct: 846  R 846



 Score =  114 bits (286), Expect = 1e-22
 Identities = 53/91 (58%), Positives = 66/91 (72%)
 Frame = +1

Query: 1294 FPDVLEGYSDANWITDSEETKSTSGYVFTLAGGAISWKSAKQTVISRSTMEAELIALDAA 1473
            +P VLEGYSD+NWI+D +E K+TSGYVFTL GGA+SW+S KQT+++RSTMEAEL ALD A
Sbjct: 972  YPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTA 1031

Query: 1474 CTEAEWLKSFLNDXXXXXXXXXXXXXHCDSQ 1566
              EAEWL+  L D             +CD+Q
Sbjct: 1032 TVEAEWLRDLLMDLPVVEKPVPAILMNCDNQ 1062


>gb|PHT56189.1| hypothetical protein CQW23_04675 [Capsicum baccatum]
          Length = 921

 Score =  535 bits (1379), Expect = e-177
 Identities = 256/423 (60%), Positives = 325/423 (76%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            +DICD     +RGG +YFITFIDD ++YCYVYL+N+K    D F++YK EVENQL+K+IK
Sbjct: 500  TDICDMKSTPSRGGKKYFITFIDDCTRYCYVYLLNSKDEAIDAFRQYKTEVENQLDKRIK 559

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
            ++RSDRGGEY S   A  C  +GI+H+ T  YSPQSNG+AERKNRTL +M+NA+L+SSGL
Sbjct: 560  MIRSDRGGEYESP-FAQICVENGIIHQTTAPYSPQSNGIAERKNRTLKEMMNALLISSGL 618

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            P+N WGEA+ +A  ILNRVP+  +   PYE WK +KP LK+ KVWGCLAKV +PI K+ K
Sbjct: 619  PQNLWGEAILTANRILNRVPHSKTQSIPYEKWKGRKPNLKYFKVWGCLAKVQVPIPKRVK 678

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLSRPV 720
            IGPKT+DCVF+GY+ +S   RFLV  SE  +I+ N +IES +A FFENI+P K +  +  
Sbjct: 679  IGPKTVDCVFIGYAKSSKACRFLVHKSEHSDINENTVIESDNAEFFENIYPYKTRHEQSS 738

Query: 721  GACSSSNDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTYNDAMLSLDA 900
            G      D  S   + NE +  PRRS R R + +FG DF  FLLE++P+T+ +AM S D+
Sbjct: 739  GGSKRPRDEPSE-NVHNEEN--PRRSTRQRTSTSFGSDFVTFLLENEPRTFKEAMSSSDS 795

Query: 901  PFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKYKARLVVKGF 1080
             FWKEAVN E++S+  N TW L DLPPG KP+GSKWIFK+K++ DG+I+KYKARLVVKGF
Sbjct: 796  SFWKEAVNSEIDSILSNHTWELVDLPPGNKPLGSKWIFKRKMKTDGTIDKYKARLVVKGF 855

Query: 1081 EQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEEEIYMNQPKG 1260
             QK G+D+FDTYSPV++IT+IRMLIA+A+VY L IHQMDVKTAFLNG+LEEEIYM QP+G
Sbjct: 856  NQKEGLDYFDTYSPVTRITSIRMLIALAAVYDLQIHQMDVKTAFLNGELEEEIYMEQPEG 915

Query: 1261 FVV 1269
            FVV
Sbjct: 916  FVV 918


>gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1235

 Score =  543 bits (1399), Expect = e-176
 Identities = 265/481 (55%), Positives = 354/481 (73%), Gaps = 12/481 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SD+C+ N VLT+GG +YF+TFIDD +++CYVYL+  K    D FK YKAEV+NQL++KIK
Sbjct: 428  SDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVKNQLDRKIK 487

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 488  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTTGL 547

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +KP+L +L+ WGCLAKVN+PI KKRK
Sbjct: 548  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 607

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLS--- 711
            +GPKT+DCVF+GY+ +S  YRFL+  SEVP++    I+ESRDA FFE+ FPMKD  S   
Sbjct: 608  LGPKTVDCVFLGYAYHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 667

Query: 712  RPVGACSSS----NDNNSSPTIFNEASIE--PRRSKRSRKAKNFGDDFYIFLLEDDPKTY 873
            +P     SS         +  + +E  +   PRRSKR + AK+FGDDF ++L++D PK+ 
Sbjct: 668  QPSEIIPSSITPPEQTKHTHELVSEEDVSEAPRRSKRQKTAKSFGDDFTVYLVDDTPKSI 727

Query: 874  NDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKY 1053
            ++A  S DA +WKEAV  EM+S+  N TW +T+ P GCKP+G KW+FKKKLR DG+IEKY
Sbjct: 728  SEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKY 787

Query: 1054 KARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEE 1233
            KA+LV KG+ QK G DFFDTYSPV+++TTIR+L+++A+ + L +HQMDVKTAFLNG+L+E
Sbjct: 788  KAQLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDE 847

Query: 1234 EIYMNQPKGFVVADEEKKIC-FPDVLEGYSDA--NWITDSEETKSTSGYVFTLAGGAISW 1404
            EIYM+QP GFVV  +E K+C     L G   A   W    ++T +++G+    A   + +
Sbjct: 848  EIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYY 907

Query: 1405 K 1407
            +
Sbjct: 908  R 908



 Score =  165 bits (417), Expect = 7e-39
 Identities = 81/162 (50%), Positives = 111/162 (68%), Gaps = 1/162 (0%)
 Frame = +1

Query: 1294 FPDVLEGYSDANWITDSEETKSTSGYVFTLAGGAISWKSAKQTVISRSTMEAELIALDAA 1473
            +P VLEGYSD+NWI+D +E K+TSGYVFTL GGA+SW+S KQT+++RSTMEAEL ALD A
Sbjct: 1074 YPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTA 1133

Query: 1474 CTEAEWLKSFLNDXXXXXXXXXXXXXHCDSQVAIARAKSKNYNEK-RRHLTVRHKSIRHL 1650
              EAEWL+  L +             +CD+Q  I +  S   N K  RH+  R KS+R L
Sbjct: 1134 TVEAEWLRDLLMNLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKL 1193

Query: 1651 ISHGVISLDFVRSENNIADPLTKGLARQQVLQSSRGMGLEPI 1776
             + GVI+LD++++  N+ADP T+GL+R  +  +S+ MGL P+
Sbjct: 1194 RNSGVITLDYIQTARNLADPFTEGLSRNVIDNASKEMGLRPM 1235


>gb|AAS01934.1| putative Integrase core domain containing protein [Oryza sativa
            Japonica Group]
          Length = 1180

 Score =  541 bits (1395), Expect = e-176
 Identities = 265/481 (55%), Positives = 352/481 (73%), Gaps = 12/481 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 373  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 432

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             LRSDRGGE+ S+E   FC+ HGI+HE +P YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 433  RLRSDRGGEFFSNEFDLFCEEHGIIHERSPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 492

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +KP+L +L+ WGCLAKVN+PI KKRK
Sbjct: 493  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 552

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLS--- 711
            +GPKT+DCVF+GY+ +S  YRFL+  SEVP++    I+ESRDA FFE+ FPMKD  S   
Sbjct: 553  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 612

Query: 712  RPVGACSSS------NDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTY 873
            +P     SS       ++        + S  PR+SKR R AK+FGDDF ++L++D PK+ 
Sbjct: 613  QPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRKSKRQRTAKSFGDDFTVYLVDDTPKSI 672

Query: 874  NDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKY 1053
            ++A  S DA +WKEAV  EM+S+  N TW +T+ P GCKP+G KW+FKKKLR DG+IEKY
Sbjct: 673  SEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKY 732

Query: 1054 KARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEE 1233
            KARLV KG+ QK G DFFDTYSPV+++TTIR+L+++A+ + L +HQMDVKTAFLNG+L+E
Sbjct: 733  KARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDE 792

Query: 1234 EIYMNQPKGFVVADEEKKIC-FPDVLEGYSDA--NWITDSEETKSTSGYVFTLAGGAISW 1404
            EIYM+QP GFVV  +E K+C     L G   A   W    ++T +++G+    A   + +
Sbjct: 793  EIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTFTSAGFAVNEADKCVYY 852

Query: 1405 K 1407
            +
Sbjct: 853  R 853



 Score =  167 bits (423), Expect = 1e-39
 Identities = 82/162 (50%), Positives = 110/162 (67%), Gaps = 1/162 (0%)
 Frame = +1

Query: 1294 FPDVLEGYSDANWITDSEETKSTSGYVFTLAGGAISWKSAKQTVISRSTMEAELIALDAA 1473
            +P VLEGYSD+NWI+D +E K+TSGYVFTL GGA+SW+S KQT+++RSTME EL ALD A
Sbjct: 1019 YPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEVELTALDTA 1078

Query: 1474 CTEAEWLKSFLNDXXXXXXXXXXXXXHCDSQVAIARAKSKNYNEK-RRHLTVRHKSIRHL 1650
              EAEWL+  L D             +CD+Q  I +  S   N K  RH+  R KS+R L
Sbjct: 1079 TVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKL 1138

Query: 1651 ISHGVISLDFVRSENNIADPLTKGLARQQVLQSSRGMGLEPI 1776
             + GVI+LD++++  N+ADP TKGL+R  +  +S+ MGL P+
Sbjct: 1139 RNSGVITLDYIQTARNLADPFTKGLSRNVINNASKEMGLRPM 1180


>gb|KZV26201.1| hypothetical protein F511_28547 [Dorcoceras hygrometricum]
          Length = 979

 Score =  535 bits (1379), Expect = e-176
 Identities = 260/443 (58%), Positives = 327/443 (73%), Gaps = 12/443 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SDICD   V TRGG +YF+TFIDD ++YCYVYL+  K    + F+ YKAEVENQL+++IK
Sbjct: 505  SDICDLKFVQTRGGKKYFVTFIDDCTRYCYVYLLRGKDEALEAFQNYKAEVENQLDQRIK 564

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             +RSDRGGEY +    D+C   GI+H+ T  YSPQSNGVAERKNRTL +M+NA+L++SGL
Sbjct: 565  NIRSDRGGEYGAP-FDDYCVKSGIIHQTTAPYSPQSNGVAERKNRTLKEMMNALLINSGL 623

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            P+N WGEA+ SA  ILN++P K  DKTPYELWK  KP+ K+LKVWGCLAKV +P  K+ K
Sbjct: 624  PQNLWGEAILSANHILNKIPQKKKDKTPYELWKGHKPSYKYLKVWGCLAKVEVPKPKQVK 683

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKD---KLS 711
            IGPKT D +F+GY+ NS  YRFLV  S++P I  +  IESR+A+FFEN+FP K+   K  
Sbjct: 684  IGPKTFDGIFIGYANNSSAYRFLVHKSDIPSIHEDTTIESRNAIFFENVFPRKEGNNKER 743

Query: 712  RPVGACSSSNDNNSSPTIFNEASIE---------PRRSKRSRKAKNFGDDFYIFLLEDDP 864
              +     SN+N  S    N+ SIE         PRRSKR+R  K+FG DF  ++LE++P
Sbjct: 744  NEIQRNEGSNENEKSEPSCNKRSIEDVDDQDHDEPRRSKRARIEKSFGPDFISYVLENEP 803

Query: 865  KTYNDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSI 1044
            +T  +A+ S DAP WKEAVN E+ S+  N TW L DLPPG KP+G KWI K K + DG+I
Sbjct: 804  RTLKEALSSPDAPLWKEAVNSEIESIMHNHTWELVDLPPGTKPLGRKWILKCKYKADGTI 863

Query: 1045 EKYKARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGD 1224
            +KYKARLV KGF QK GID+FDTYSPV++IT+IRM IAIA+++ L IHQMDVKTAFLNG+
Sbjct: 864  DKYKARLVAKGFRQKEGIDYFDTYSPVTRITSIRMFIAIAALHDLEIHQMDVKTAFLNGE 923

Query: 1225 LEEEIYMNQPKGFVVADEEKKIC 1293
            LEEEIYM QP+GFV   +EK +C
Sbjct: 924  LEEEIYMEQPEGFVAPGQEKNVC 946


>gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1308

 Score =  545 bits (1403), Expect = e-176
 Identities = 267/481 (55%), Positives = 352/481 (73%), Gaps = 12/481 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +KP+L +L+ WGCLAKVN+PI KKRK
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 674

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLS--- 711
            +GPKT+DCVF+GY+ +S  YRFL+  SEVP++    I+ESRDA FFE+ FPMKD  S   
Sbjct: 675  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 734

Query: 712  RPVGACSSS------NDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTY 873
            +P     SS       ++        + S  PRRSKR R AK+FGDDF ++L++D PK+ 
Sbjct: 735  QPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSI 794

Query: 874  NDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKY 1053
            ++A  S DA +WKEAV  EM+S+  N TW +T+ P GCKP+G KW+FKKKLR DG+IEKY
Sbjct: 795  SEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKY 854

Query: 1054 KARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEE 1233
            KARLV KG+ QK G DFFDTYSPV+++TTIR+L+++A+ + L +HQMDVKTAFLNG+L+E
Sbjct: 855  KARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDE 914

Query: 1234 EIYMNQPKGFVVADEEKKIC-FPDVLEGYSDA--NWITDSEETKSTSGYVFTLAGGAISW 1404
            EIYM+QP GFVV  +E K+C     L G   A   W    ++T +++G+    A   + +
Sbjct: 915  EIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYY 974

Query: 1405 K 1407
            +
Sbjct: 975  R 975



 Score =  111 bits (277), Expect = 2e-21
 Identities = 50/73 (68%), Positives = 61/73 (83%)
 Frame = +1

Query: 1294 FPDVLEGYSDANWITDSEETKSTSGYVFTLAGGAISWKSAKQTVISRSTMEAELIALDAA 1473
            +P VLEGYSD+NWI+D +E K+TSGYVFTL GGA+SW+S KQT+++RSTMEAEL ALD A
Sbjct: 1141 YPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTA 1200

Query: 1474 CTEAEWLKSFLND 1512
              EAEWL+  L D
Sbjct: 1201 TVEAEWLRDLLMD 1213


>gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1197

 Score =  541 bits (1395), Expect = e-176
 Identities = 265/481 (55%), Positives = 352/481 (73%), Gaps = 12/481 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 390  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 449

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             LRSDRGGE+ S+E   FC+ HGI+HE +P YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 450  RLRSDRGGEFFSNEFDLFCEEHGIIHERSPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 509

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +KP+L +L+ WGCLAKVN+PI KKRK
Sbjct: 510  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 569

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLS--- 711
            +GPKT+DCVF+GY+ +S  YRFL+  SEVP++    I+ESRDA FFE+ FPMKD  S   
Sbjct: 570  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 629

Query: 712  RPVGACSSS------NDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTY 873
            +P     SS       ++        + S  PR+SKR R AK+FGDDF ++L++D PK+ 
Sbjct: 630  QPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRKSKRQRTAKSFGDDFTVYLVDDTPKSI 689

Query: 874  NDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKY 1053
            ++A  S DA +WKEAV  EM+S+  N TW +T+ P GCKP+G KW+FKKKLR DG+IEKY
Sbjct: 690  SEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKY 749

Query: 1054 KARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEE 1233
            KARLV KG+ QK G DFFDTYSPV+++TTIR+L+++A+ + L +HQMDVKTAFLNG+L+E
Sbjct: 750  KARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDE 809

Query: 1234 EIYMNQPKGFVVADEEKKIC-FPDVLEGYSDA--NWITDSEETKSTSGYVFTLAGGAISW 1404
            EIYM+QP GFVV  +E K+C     L G   A   W    ++T +++G+    A   + +
Sbjct: 810  EIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTFTSAGFAVNEADKCVYY 869

Query: 1405 K 1407
            +
Sbjct: 870  R 870



 Score =  167 bits (423), Expect = 1e-39
 Identities = 82/162 (50%), Positives = 110/162 (67%), Gaps = 1/162 (0%)
 Frame = +1

Query: 1294 FPDVLEGYSDANWITDSEETKSTSGYVFTLAGGAISWKSAKQTVISRSTMEAELIALDAA 1473
            +P VLEGYSD+NWI+D +E K+TSGYVFTL GGA+SW+S KQT+++RSTME EL ALD A
Sbjct: 1036 YPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEVELTALDTA 1095

Query: 1474 CTEAEWLKSFLNDXXXXXXXXXXXXXHCDSQVAIARAKSKNYNEK-RRHLTVRHKSIRHL 1650
              EAEWL+  L D             +CD+Q  I +  S   N K  RH+  R KS+R L
Sbjct: 1096 TVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKL 1155

Query: 1651 ISHGVISLDFVRSENNIADPLTKGLARQQVLQSSRGMGLEPI 1776
             + GVI+LD++++  N+ADP TKGL+R  +  +S+ MGL P+
Sbjct: 1156 RNSGVITLDYIQTARNLADPFTKGLSRNVINNASKEMGLRPM 1197


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  545 bits (1403), Expect = e-176
 Identities = 267/481 (55%), Positives = 352/481 (73%), Gaps = 12/481 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +KP+L +L+ WGCLAKVN+PI KKRK
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 674

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLS--- 711
            +GPKT+DCVF+GY+ +S  YRFL+  SEVP++    I+ESRDA FFE+ FPMKD  S   
Sbjct: 675  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 734

Query: 712  RPVGACSSS------NDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTY 873
            +P     SS       ++        + S  PRRSKR R AK+FGDDF ++L++D PK+ 
Sbjct: 735  QPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSI 794

Query: 874  NDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKY 1053
            ++A  S DA +WKEAV  EM+S+  N TW +T+ P GCKP+G KW+FKKKLR DG+IEKY
Sbjct: 795  SEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKY 854

Query: 1054 KARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEE 1233
            KARLV KG+ QK G DFFDTYSPV+++TTIR+L+++A+ + L +HQMDVKTAFLNG+L+E
Sbjct: 855  KARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDE 914

Query: 1234 EIYMNQPKGFVVADEEKKIC-FPDVLEGYSDA--NWITDSEETKSTSGYVFTLAGGAISW 1404
            EIYM+QP GFVV  +E K+C     L G   A   W    ++T +++G+    A   + +
Sbjct: 915  EIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYY 974

Query: 1405 K 1407
            +
Sbjct: 975  R 975



 Score =  169 bits (429), Expect = 2e-40
 Identities = 84/162 (51%), Positives = 111/162 (68%), Gaps = 1/162 (0%)
 Frame = +1

Query: 1294 FPDVLEGYSDANWITDSEETKSTSGYVFTLAGGAISWKSAKQTVISRSTMEAELIALDAA 1473
            +P VLEGYSD+NWI+D +E K+TSGYVFTL GGA+SW+S KQT+++RSTMEAEL ALD A
Sbjct: 1141 YPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTA 1200

Query: 1474 CTEAEWLKSFLNDXXXXXXXXXXXXXHCDSQVAIARAKSKNYNEK-RRHLTVRHKSIRHL 1650
              EAEWL+  L D             +CD+Q  I +  S   N K  RH+  R KS+R L
Sbjct: 1201 TVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKL 1260

Query: 1651 ISHGVISLDFVRSENNIADPLTKGLARQQVLQSSRGMGLEPI 1776
             + GVI+LD++++  N+ADP TKGL+R  +  +S+ MGL PI
Sbjct: 1261 RNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPI 1302


>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  545 bits (1403), Expect = e-176
 Identities = 267/481 (55%), Positives = 352/481 (73%), Gaps = 12/481 (2%)
 Frame = +1

Query: 1    SDICDSNHVLTRGGNQYFITFIDDFSKYCYVYLINAKSNLFDKFKEYKAEVENQLEKKIK 180
            SD+C+ N VLT+GG +YF+T IDD +++CYVYL+  K    D FK YKAEVENQL++KIK
Sbjct: 495  SDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIK 554

Query: 181  ILRSDRGGEYASDEMADFCKLHGIVHEVTPSYSPQSNGVAERKNRTLLDMVNAMLLSSGL 360
             LRSDRGGE+ S+E   FC+ HGI+HE TP YSP+SNG+AERKNRTL D+VNAML ++GL
Sbjct: 555  RLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614

Query: 361  PKNCWGEALYSACLILNRVPYKNSDKTPYELWKNKKPTLKFLKVWGCLAKVNIPIVKKRK 540
            PK  WGEAL ++  +LNRVP +N DKTPYE+W  +KP+L +L+ WGCLAKVN+PI KKRK
Sbjct: 615  PKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRK 674

Query: 541  IGPKTIDCVFVGYSLNSPTYRFLVFNSEVPEISNNIIIESRDAVFFENIFPMKDKLS--- 711
            +GPKT+DCVF+GY+ +S  YRFL+  SEVP++    I+ESRDA FFE+ FPMKD  S   
Sbjct: 675  LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSN 734

Query: 712  RPVGACSSS------NDNNSSPTIFNEASIEPRRSKRSRKAKNFGDDFYIFLLEDDPKTY 873
            +P     SS       ++        + S  PRRSKR R AK+FGDDF ++L++D PK+ 
Sbjct: 735  QPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFTVYLVDDTPKSI 794

Query: 874  NDAMLSLDAPFWKEAVNDEMNSLFINKTWVLTDLPPGCKPIGSKWIFKKKLRIDGSIEKY 1053
            ++A  S DA +WKEAV  EM+S+  N TW +T+ P GCKP+G KW+FKKKLR DG+IEKY
Sbjct: 795  SEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKY 854

Query: 1054 KARLVVKGFEQKPGIDFFDTYSPVSKITTIRMLIAIASVYKLGIHQMDVKTAFLNGDLEE 1233
            KARLV KG+ QK G DFFDTYSPV+++TTIR+L+++A+ + L +HQMDVKTAFLNG+L+E
Sbjct: 855  KARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDE 914

Query: 1234 EIYMNQPKGFVVADEEKKIC-FPDVLEGYSDA--NWITDSEETKSTSGYVFTLAGGAISW 1404
            EIYM+QP GFVV  +E K+C     L G   A   W    ++T +++G+    A   + +
Sbjct: 915  EIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYY 974

Query: 1405 K 1407
            +
Sbjct: 975  R 975



 Score =  114 bits (286), Expect = 1e-22
 Identities = 53/91 (58%), Positives = 66/91 (72%)
 Frame = +1

Query: 1294 FPDVLEGYSDANWITDSEETKSTSGYVFTLAGGAISWKSAKQTVISRSTMEAELIALDAA 1473
            +P VLEGYSD+NWI+D +E K+TSGYVFTL GGA+SW+S KQT+++RSTMEAEL ALD A
Sbjct: 1141 YPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTA 1200

Query: 1474 CTEAEWLKSFLNDXXXXXXXXXXXXXHCDSQ 1566
              EAEWL+  L D             +CD+Q
Sbjct: 1201 TVEAEWLRDLLMDLPVVEKPVPAILMNCDNQ 1231