BLASTX nr result

ID: Rehmannia31_contig00010769 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00010769
         (370 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN05908.1| Poly(A)-specific exoribonuclease PARN [Handroanth...   216   2e-63
ref|XP_011072348.1| CRM-domain containing factor CFM3, chloropla...   213   2e-62
ref|XP_022881160.1| CRM-domain containing factor CFM3, chloropla...   206   5e-60
ref|XP_012856334.1| PREDICTED: chloroplastic group IIA intron sp...   200   1e-57
ref|XP_004235759.1| PREDICTED: CRM-domain containing factor CFM3...   194   1e-55
ref|XP_009767017.1| PREDICTED: chloroplastic group IIA intron sp...   193   5e-55
ref|XP_019243905.1| PREDICTED: CRM-domain containing factor CFM3...   193   5e-55
ref|XP_015069542.1| PREDICTED: chloroplastic group IIA intron sp...   192   6e-55
ref|XP_016503563.1| PREDICTED: CRM-domain containing factor CFM3...   192   6e-55
ref|XP_009614576.1| PREDICTED: CRM-domain containing factor CFM3...   192   7e-55
emb|CDO98426.1| unnamed protein product [Coffea canephora]            192   1e-54
gb|KVI00855.1| RNA-binding, CRM domain-containing protein [Cynar...   191   1e-54
gb|PHT47171.1| hypothetical protein CQW23_11379 [Capsicum baccatum]   191   2e-54
gb|PHU24321.1| hypothetical protein BC332_09428 [Capsicum chinense]   190   4e-54
gb|PHT61346.1| hypothetical protein T459_34808 [Capsicum annuum]      190   4e-54
ref|XP_016563130.1| PREDICTED: CRM-domain containing factor CFM3...   190   4e-54
ref|XP_006341605.1| PREDICTED: chloroplastic group IIA intron sp...   189   8e-54
ref|XP_010265125.1| PREDICTED: CRM-domain containing factor CFM3...   188   3e-53
ref|XP_010549123.1| PREDICTED: CRM-domain containing factor CFM3...   187   8e-53
ref|XP_021909174.1| CRM-domain containing factor CFM3, chloropla...   186   3e-52

>gb|PIN05908.1| Poly(A)-specific exoribonuclease PARN [Handroanthus impetiginosus]
          Length = 867

 Score =  216 bits (550), Expect = 2e-63
 Identities = 102/122 (83%), Positives = 111/122 (90%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           F+P+V+SP++SVTK+SD K  VLEK NPV+S RV SMT+EE EYN LLD LGPRFEDWWG
Sbjct: 315 FIPDVSSPDHSVTKNSDVKSPVLEKSNPVISARVKSMTKEETEYNHLLDELGPRFEDWWG 374

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGVLPVDADLLP TIPGYKTPFRLLPTGMRS LTNAEMTN+RKLAKSLPCHFALGRNRNH
Sbjct: 375 TGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALGRNRNH 434

Query: 8   QG 3
           QG
Sbjct: 435 QG 436


>ref|XP_011072348.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
           [Sesamum indicum]
          Length = 821

 Score =  213 bits (542), Expect = 2e-62
 Identities = 101/122 (82%), Positives = 108/122 (88%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVPNV+S +NSVT+ SD K  V+EK NPV+S R  SM+EEEAEYN LLDGLGPRFEDWWG
Sbjct: 319 FVPNVSSLDNSVTRTSDGKSPVIEKSNPVISARAESMSEEEAEYNRLLDGLGPRFEDWWG 378

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGVLPVDADLLP TIPGYKTPFRLLP GMR  LTNAEMTN+RKLAKSLPCHFALGRNRNH
Sbjct: 379 TGVLPVDADLLPQTIPGYKTPFRLLPAGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNH 438

Query: 8   QG 3
           QG
Sbjct: 439 QG 440


>ref|XP_022881160.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
           [Olea europaea var. sylvestris]
          Length = 759

 Score =  206 bits (523), Expect = 5e-60
 Identities = 98/122 (80%), Positives = 107/122 (87%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVPNV+SP+NSV + S+    V EK  P +SG   SMTEEEAEYN+LLDGLGPRFEDWWG
Sbjct: 316 FVPNVSSPDNSVVRSSNDISSVSEKSYPNLSGHAESMTEEEAEYNNLLDGLGPRFEDWWG 375

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGVLPVDADLLP TIPGYKTPFRLLPTGMRS LTNAEMTN+RK+AKSLPCHFALGRNR+H
Sbjct: 376 TGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRHH 435

Query: 8   QG 3
           QG
Sbjct: 436 QG 437


>ref|XP_012856334.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Erythranthe guttata]
 gb|EYU21529.1| hypothetical protein MIMGU_mgv1a001412mg [Erythranthe guttata]
          Length = 824

 Score =  200 bits (508), Expect = 1e-57
 Identities = 98/123 (79%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPV-VSGRVASMTEEEAEYNSLLDGLGPRFEDWW 192
           FVPNV+S +NSV +++DA  QVLE+ NP  +S  V   TEEEAEYN+LLDGLGPRFEDWW
Sbjct: 320 FVPNVSSSDNSVAQNTDAGSQVLERSNPAAISRTVKKTTEEEAEYNTLLDGLGPRFEDWW 379

Query: 191 GTGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRN 12
           G GVLPVDADLLP TIPGYKTPFRLLPTGMRS LTNAEMTN+RKLAKSLP HFALGRNRN
Sbjct: 380 GMGVLPVDADLLPGTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPSHFALGRNRN 439

Query: 11  HQG 3
           HQG
Sbjct: 440 HQG 442


>ref|XP_004235759.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial [Solanum lycopersicum]
 ref|XP_010318614.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial [Solanum lycopersicum]
 ref|XP_019068709.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial [Solanum lycopersicum]
          Length = 820

 Score =  194 bits (494), Expect = 1e-55
 Identities = 94/122 (77%), Positives = 106/122 (86%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVP+V+S + S+TKD+ +   V+E  N V   RV SMTEEE+E+N +LDGLGPRFEDWWG
Sbjct: 321 FVPDVSS-DKSITKDNKSFNPVIENRNQVHPNRVQSMTEEESEFNRVLDGLGPRFEDWWG 379

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGVLPVDADLLP TIPGYKTPFRLLPTGMRS LTNAEMTN+RK+AKSLPCHFALGRNRNH
Sbjct: 380 TGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNH 439

Query: 8   QG 3
           QG
Sbjct: 440 QG 441


>ref|XP_009767017.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Nicotiana sylvestris]
 ref|XP_009767027.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Nicotiana sylvestris]
 ref|XP_016479052.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial-like [Nicotiana tabacum]
 ref|XP_016479053.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial-like [Nicotiana tabacum]
          Length = 831

 Score =  193 bits (490), Expect = 5e-55
 Identities = 93/122 (76%), Positives = 104/122 (85%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVP+V+S + S+ KD  +   V+E  N V   RV SMTEEEAE+N LLDGLGPR+EDWWG
Sbjct: 330 FVPDVSS-DKSIAKDDKSSNPVIENRNQVHPHRVQSMTEEEAEFNRLLDGLGPRYEDWWG 388

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGV+PVDADLLP TIPGYKTPFRLLPTGMRS LTNAEMTN+RK+AKSLPCHFALGRNRNH
Sbjct: 389 TGVIPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNH 448

Query: 8   QG 3
           QG
Sbjct: 449 QG 450


>ref|XP_019243905.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial [Nicotiana attenuata]
 ref|XP_019243906.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial [Nicotiana attenuata]
 gb|OIT05111.1| crm-domain containing factor cfm3, chloroplasticmitochondrial
           [Nicotiana attenuata]
          Length = 833

 Score =  193 bits (490), Expect = 5e-55
 Identities = 94/122 (77%), Positives = 104/122 (85%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVP+V+S + S+ KD  +   V+E  N V   RV SMTEEEAE+N LLDGLGPR+EDWWG
Sbjct: 329 FVPDVSS-DKSIAKDIKSSNPVIENRNQVHPHRVQSMTEEEAEFNRLLDGLGPRYEDWWG 387

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGVLPVDADLLP TIPGYKTPFRLLPTGMRS LTNAEMTN+RK+AKSLPCHFALGRNRNH
Sbjct: 388 TGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNH 447

Query: 8   QG 3
           QG
Sbjct: 448 QG 449


>ref|XP_015069542.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Solanum pennellii]
 ref|XP_015069543.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Solanum pennellii]
          Length = 820

 Score =  192 bits (489), Expect = 6e-55
 Identities = 93/122 (76%), Positives = 105/122 (86%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVP+V+S + S+TKD+ +   V+E  N     RV SMTEEE+E+N +LDGLGPRFEDWWG
Sbjct: 321 FVPDVSS-DKSITKDNKSFNPVIENRNQFHPNRVQSMTEEESEFNRVLDGLGPRFEDWWG 379

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGVLPVDADLLP TIPGYKTPFRLLPTGMRS LTNAEMTN+RK+AKSLPCHFALGRNRNH
Sbjct: 380 TGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNH 439

Query: 8   QG 3
           QG
Sbjct: 440 QG 441


>ref|XP_016503563.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial-like [Nicotiana tabacum]
          Length = 832

 Score =  192 bits (489), Expect = 6e-55
 Identities = 93/122 (76%), Positives = 104/122 (85%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVP+V+S + S+ KD  +   V+E  N V   RV +MTEEEAE+N LLDGLGPR+EDWWG
Sbjct: 328 FVPDVSS-DKSIAKDGKSSNPVIENRNQVHPHRVQNMTEEEAEFNRLLDGLGPRYEDWWG 386

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGVLPVDADLLP TIPGYKTPFRLLPTGMRS LTNAEMTN+RK+AKSLPCHFALGRNRNH
Sbjct: 387 TGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNH 446

Query: 8   QG 3
           QG
Sbjct: 447 QG 448


>ref|XP_009614576.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 834

 Score =  192 bits (489), Expect = 7e-55
 Identities = 93/122 (76%), Positives = 104/122 (85%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVP+V+S + S+ KD  +   V+E  N V   RV +MTEEEAE+N LLDGLGPR+EDWWG
Sbjct: 330 FVPDVSS-DKSIAKDGKSSNPVIENRNQVHPHRVQNMTEEEAEFNRLLDGLGPRYEDWWG 388

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGVLPVDADLLP TIPGYKTPFRLLPTGMRS LTNAEMTN+RK+AKSLPCHFALGRNRNH
Sbjct: 389 TGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNH 448

Query: 8   QG 3
           QG
Sbjct: 449 QG 450


>emb|CDO98426.1| unnamed protein product [Coffea canephora]
          Length = 837

 Score =  192 bits (487), Expect = 1e-54
 Identities = 93/122 (76%), Positives = 99/122 (81%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVPNV+    S+   +     VLEK NP V+  V SMTEEE EYNSLL GLGPRFEDWWG
Sbjct: 328 FVPNVSPSGTSLATKNGIVYPVLEKSNPAVTNGVESMTEEEIEYNSLLGGLGPRFEDWWG 387

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGV PVDADLLP TIPGYKTPFRL+P GMRS LTNAEMTN+RKLAKSLPCHFALGRNRNH
Sbjct: 388 TGVHPVDADLLPQTIPGYKTPFRLIPVGMRSHLTNAEMTNLRKLAKSLPCHFALGRNRNH 447

Query: 8   QG 3
           QG
Sbjct: 448 QG 449


>gb|KVI00855.1| RNA-binding, CRM domain-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 798

 Score =  191 bits (486), Expect = 1e-54
 Identities = 88/122 (72%), Positives = 103/122 (84%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVP+V+S  N +T++ D+    L    P ++GR  SMTEEEAE++S+LDGLGPRF +WWG
Sbjct: 316 FVPDVSSANNQITRNGDSAATSLATRTPALAGRAESMTEEEAEFSSVLDGLGPRFYEWWG 375

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TG+LPVDADLLP TIPG+KTPFRLLPTGMR  LTNAEMTN+RKLAKSLPCHFALGRNRNH
Sbjct: 376 TGILPVDADLLPQTIPGFKTPFRLLPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNH 435

Query: 8   QG 3
           QG
Sbjct: 436 QG 437


>gb|PHT47171.1| hypothetical protein CQW23_11379 [Capsicum baccatum]
          Length = 827

 Score =  191 bits (486), Expect = 2e-54
 Identities = 93/122 (76%), Positives = 105/122 (86%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVP+V+S +  ++KDS +   V+E  + V   RV SMTEEEAE+N +LDGLGPRFEDWWG
Sbjct: 324 FVPDVSS-DKPISKDSKSFNPVIENRSQVHPNRVLSMTEEEAEFNRVLDGLGPRFEDWWG 382

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGVLPVDADLLP TIPGYKTPFRLLPTGMRS LTNAEMTN+RK+AKSLPCHFALGRNRNH
Sbjct: 383 TGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNH 442

Query: 8   QG 3
           QG
Sbjct: 443 QG 444


>gb|PHU24321.1| hypothetical protein BC332_09428 [Capsicum chinense]
          Length = 827

 Score =  190 bits (483), Expect = 4e-54
 Identities = 92/122 (75%), Positives = 105/122 (86%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVP+V+S +  ++KDS +   V+E  + V   RV +MTEEEAE+N +LDGLGPRFEDWWG
Sbjct: 324 FVPDVSS-DKPISKDSKSFNPVIENRSQVHPNRVLNMTEEEAEFNRVLDGLGPRFEDWWG 382

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGVLPVDADLLP TIPGYKTPFRLLPTGMRS LTNAEMTN+RK+AKSLPCHFALGRNRNH
Sbjct: 383 TGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNH 442

Query: 8   QG 3
           QG
Sbjct: 443 QG 444


>gb|PHT61346.1| hypothetical protein T459_34808 [Capsicum annuum]
          Length = 827

 Score =  190 bits (483), Expect = 4e-54
 Identities = 92/122 (75%), Positives = 105/122 (86%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVP+V+S +  ++KDS +   V+E  + V   RV +MTEEEAE+N +LDGLGPRFEDWWG
Sbjct: 324 FVPDVSS-DKPISKDSKSFNPVIENRSQVHPNRVLNMTEEEAEFNRVLDGLGPRFEDWWG 382

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGVLPVDADLLP TIPGYKTPFRLLPTGMRS LTNAEMTN+RK+AKSLPCHFALGRNRNH
Sbjct: 383 TGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNH 442

Query: 8   QG 3
           QG
Sbjct: 443 QG 444


>ref|XP_016563130.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial [Capsicum annuum]
          Length = 827

 Score =  190 bits (483), Expect = 4e-54
 Identities = 92/122 (75%), Positives = 105/122 (86%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVP+V+S +  ++KDS +   V+E  + V   RV +MTEEEAE+N +LDGLGPRFEDWWG
Sbjct: 324 FVPDVSS-DKPISKDSKSFNPVIENRSQVHPNRVLNMTEEEAEFNRVLDGLGPRFEDWWG 382

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGVLPVDADLLP TIPGYKTPFRLLPTGMRS LTNAEMTN+RK+AKSLPCHFALGRNRNH
Sbjct: 383 TGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNH 442

Query: 8   QG 3
           QG
Sbjct: 443 QG 444


>ref|XP_006341605.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Solanum tuberosum]
          Length = 824

 Score =  189 bits (481), Expect = 8e-54
 Identities = 92/122 (75%), Positives = 104/122 (85%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVASMTEEEAEYNSLLDGLGPRFEDWWG 189
           FVP+V+S + S+TKD+ +   V+E  N V    V SMT EE+E+N +LDGLGPRFEDWWG
Sbjct: 321 FVPDVSS-DKSITKDNKSFNPVIENRNQVHPNSVQSMTVEESEFNRVLDGLGPRFEDWWG 379

Query: 188 TGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNRNH 9
           TGVLPVDADLLP TIPGYKTPFRLLPTGMRS LTNAEMTN+RK+AKSLPCHFALGRNRNH
Sbjct: 380 TGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNH 439

Query: 8   QG 3
           QG
Sbjct: 440 QG 441


>ref|XP_010265125.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial [Nelumbo nucifera]
          Length = 838

 Score =  188 bits (477), Expect = 3e-53
 Identities = 92/124 (74%), Positives = 103/124 (83%), Gaps = 2/124 (1%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSG--RVASMTEEEAEYNSLLDGLGPRFEDW 195
           FVP+V+S  NS++K ++  +   EK +P V    +  SMTEEEAEYNSLLDGLGPRF DW
Sbjct: 337 FVPDVSSSANSISKINNDIMSAPEKKDPGVQNPNQAESMTEEEAEYNSLLDGLGPRFVDW 396

Query: 194 WGTGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNR 15
           WGTG+LPVDADLLP TIP YKTPFRLLPTGMR  LTNAEMTN+RKLAKSLPCHFALGRNR
Sbjct: 397 WGTGILPVDADLLPQTIPSYKTPFRLLPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNR 456

Query: 14  NHQG 3
           NHQG
Sbjct: 457 NHQG 460


>ref|XP_010549123.1| PREDICTED: CRM-domain containing factor CFM3,
           chloroplastic/mitochondrial [Tarenaya hassleriana]
          Length = 826

 Score =  187 bits (474), Expect = 8e-53
 Identities = 89/124 (71%), Positives = 101/124 (81%), Gaps = 2/124 (1%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSGRVA--SMTEEEAEYNSLLDGLGPRFEDW 195
           FVP+V+S  N   K  D +  VLE  +P+V   V   +MTEEE E+NSLLD LGPRF +W
Sbjct: 342 FVPDVSSAGNEAAKADDNRTPVLEVKDPIVKNPVPVKNMTEEEVEFNSLLDSLGPRFHEW 401

Query: 194 WGTGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNR 15
           WGTGV+PVDADLLPP IPGYKTPFRLLPTGMRS LTNAEMTN+RK+AK+LPCHFALGRNR
Sbjct: 402 WGTGVVPVDADLLPPKIPGYKTPFRLLPTGMRSNLTNAEMTNLRKVAKALPCHFALGRNR 461

Query: 14  NHQG 3
           NHQG
Sbjct: 462 NHQG 465


>ref|XP_021909174.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
           [Carica papaya]
          Length = 864

 Score =  186 bits (471), Expect = 3e-52
 Identities = 89/124 (71%), Positives = 100/124 (80%), Gaps = 2/124 (1%)
 Frame = -3

Query: 368 FVPNVTSPENSVTKDSDAKIQVLEKPNPVVSG--RVASMTEEEAEYNSLLDGLGPRFEDW 195
           FVP+V++  N++      +    EK  P +    R  +MTEEEAEYNSLLDGLGPRF +W
Sbjct: 339 FVPDVSTVGNAIMASETFETSTPEKGEPTMRNLDRTTTMTEEEAEYNSLLDGLGPRFHEW 398

Query: 194 WGTGVLPVDADLLPPTIPGYKTPFRLLPTGMRSGLTNAEMTNMRKLAKSLPCHFALGRNR 15
           WGTGVLPVDADLLPP IPGYKTPFRLLPTGMRS LTNAEMTN+RK+AKSLPCHFALGRNR
Sbjct: 399 WGTGVLPVDADLLPPKIPGYKTPFRLLPTGMRSRLTNAEMTNLRKVAKSLPCHFALGRNR 458

Query: 14  NHQG 3
           NHQG
Sbjct: 459 NHQG 462


Top