BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00009654
         (2290 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011099942.1| DNA repair protein RAD4 isoform X2 [Sesamum ...  1013   0.0  
ref|XP_011099941.1| DNA repair protein RAD4 isoform X1 [Sesamum ...  1013   0.0  
gb|PIM98418.1| Nucleotide excision repair complex XPC-HR23B, sub...   970   0.0  
ref|XP_022884611.1| DNA repair protein RAD4 isoform X2 [Olea eur...   914   0.0  
ref|XP_022884610.1| DNA repair protein RAD4 isoform X1 [Olea eur...   905   0.0  
ref|XP_019182670.1| PREDICTED: DNA repair protein RAD4 [Ipomoea ...   798   0.0  
ref|XP_009589685.1| PREDICTED: DNA repair protein RAD4 isoform X...   786   0.0  
ref|XP_016499274.1| PREDICTED: DNA repair protein RAD4-like isof...   785   0.0  
ref|XP_009589684.1| PREDICTED: DNA repair protein RAD4 isoform X...   786   0.0  
ref|XP_016499273.1| PREDICTED: DNA repair protein RAD4-like isof...   785   0.0  
ref|XP_011007252.1| PREDICTED: DNA repair protein complementing ...   777   0.0  
ref|XP_011007251.1| PREDICTED: DNA repair protein complementing ...   777   0.0  
ref|XP_024037763.1| DNA repair protein RAD4 isoform X2 [Citrus c...   776   0.0  
ref|XP_006430573.1| DNA repair protein RAD4 isoform X1 [Citrus c...   776   0.0  
dbj|GAY43724.1| hypothetical protein CUMW_076680 [Citrus unshiu]      774   0.0  
ref|XP_006482097.1| PREDICTED: DNA repair protein RAD4 isoform X...   773   0.0  
ref|XP_006482096.1| PREDICTED: DNA repair protein RAD4 isoform X...   773   0.0  
ref|XP_016457355.1| PREDICTED: DNA repair protein RAD4-like [Nic...   769   0.0  
gb|EOY03915.1| DNA repair protein xp-C / rad4, putative isoform ...   768   0.0  
ref|XP_009789278.1| PREDICTED: DNA repair protein complementing ...   769   0.0  

>ref|XP_011099942.1| DNA repair protein RAD4 isoform X2 [Sesamum indicum]
          Length = 949

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 526/730 (72%), Positives = 579/730 (79%), Gaps = 8/730 (1%)
 Frame = +2

Query: 2    VAEKSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESS 181
            VAEKSCH ALASTLETREG+PEAVAALSVALFRALNLTTRFVSILDV+SLKPD D SE  
Sbjct: 223  VAEKSCHSALASTLETREGTPEAVAALSVALFRALNLTTRFVSILDVVSLKPDGDISEHI 282

Query: 182  VADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHE 361
            +    K  RDIFSSSTLMVAGPSCSSA T K    VE   SQ+A  GAGR KADKS+K+ 
Sbjct: 283  MEVCSKRGRDIFSSSTLMVAGPSCSSASTSKSPTGVEHGISQSAAGGAGRHKADKSKKNG 342

Query: 362  LQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGLKRKGDLEFQMQLEMALSATAV 541
            LQ QDSL  DKP DKMS+V+V E P D SEPCLVKS+GLKRKGDLEFQMQLEMALSATA+
Sbjct: 343  LQCQDSLTIDKPKDKMSDVAVPETPIDISEPCLVKSDGLKRKGDLEFQMQLEMALSATAI 402

Query: 542  VNSHVSMASDAXXXXXXXXXXXXX-KRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAE 718
             +S +SMAS A              KRM+KI+KEESQT S+GISTAIGSKKVGAPLYWAE
Sbjct: 403  GSSKISMASSASESPSRSSTLTPPSKRMRKIKKEESQTSSDGISTAIGSKKVGAPLYWAE 462

Query: 719  VFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTK 898
            VFC GENLTGKWVHVDA+N I+DGEHKVEAAA ACKKSLRYVVAFAG GAKDVTRRYCTK
Sbjct: 463  VFCCGENLTGKWVHVDAINGIVDGEHKVEAAALACKKSLRYVVAFAGQGAKDVTRRYCTK 522

Query: 899  WYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEASCQKKVEVSQVEPS------- 1057
            WYKVAA+R+NS+WWDAVL PL+ELESGATGG V++E EAS  +K E SQV  S       
Sbjct: 523  WYKVAAKRVNSSWWDAVLAPLRELESGATGGGVNLEYEASSHEKNEESQVANSNHGCSID 582

Query: 1058 MSNSCGASMDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYV 1237
             ++SCGA  +  EK+   S MR SFASTR SLEDMELETRAL EPLPTNQQAYRNH LYV
Sbjct: 583  KNHSCGACKECSEKQVEGSSMRKSFASTRSSLEDMELETRALTEPLPTNQQAYRNHQLYV 642

Query: 1238 IERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKR 1417
            IERWL K ++LYPKGPVLGFCSGH+VYPRTCV+TL TKERW REGLQVKAGEVP KVLKR
Sbjct: 643  IERWLNKNQVLYPKGPVLGFCSGHAVYPRTCVRTLRTKERWFREGLQVKAGEVPAKVLKR 702

Query: 1418 SMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKC 1597
            S+K  KEEA DDN+Y + DHQ IT+LYG+WQTEPL LPRAVNGIVPKNERG+VDVWSEKC
Sbjct: 703  SLKRGKEEAADDNNYTDGDHQDITALYGRWQTEPLHLPRAVNGIVPKNERGRVDVWSEKC 762

Query: 1598 LPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXX 1777
            LPPGT+HLRLPRVA VA+RLDID+A AMVGF+FRNGRS PLFEGIVVCTEFKDAIL    
Sbjct: 763  LPPGTVHLRLPRVAAVAKRLDIDYAHAMVGFEFRNGRSAPLFEGIVVCTEFKDAILQAYL 822

Query: 1778 XXXXXXXXXXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYN 1957
                             ALSRWYQLLSSIITR+RLN CYG GAL Q S EIPKS DKC  
Sbjct: 823  EEEERREAEEKRRNEALALSRWYQLLSSIITRQRLNSCYGAGALSQPSSEIPKSDDKC-- 880

Query: 1958 SSATATATQKTEASPECQQVNIPEKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCH 2137
             S +AT  Q+  ASP CQQ +  EK     SMP ENHEHEF+LD++   E G T++KRC 
Sbjct: 881  -STSATRAQEIVASPRCQQDDTSEKPYVLPSMPEENHEHEFVLDKEVFGEEGPTQVKRCR 939

Query: 2138 CGFSIQFEEL 2167
            CGF +QFE +
Sbjct: 940  CGFLVQFETI 949


>ref|XP_011099941.1| DNA repair protein RAD4 isoform X1 [Sesamum indicum]
          Length = 967

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 526/730 (72%), Positives = 579/730 (79%), Gaps = 8/730 (1%)
 Frame = +2

Query: 2    VAEKSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESS 181
            VAEKSCH ALASTLETREG+PEAVAALSVALFRALNLTTRFVSILDV+SLKPD D SE  
Sbjct: 241  VAEKSCHSALASTLETREGTPEAVAALSVALFRALNLTTRFVSILDVVSLKPDGDISEHI 300

Query: 182  VADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHE 361
            +    K  RDIFSSSTLMVAGPSCSSA T K    VE   SQ+A  GAGR KADKS+K+ 
Sbjct: 301  MEVCSKRGRDIFSSSTLMVAGPSCSSASTSKSPTGVEHGISQSAAGGAGRHKADKSKKNG 360

Query: 362  LQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGLKRKGDLEFQMQLEMALSATAV 541
            LQ QDSL  DKP DKMS+V+V E P D SEPCLVKS+GLKRKGDLEFQMQLEMALSATA+
Sbjct: 361  LQCQDSLTIDKPKDKMSDVAVPETPIDISEPCLVKSDGLKRKGDLEFQMQLEMALSATAI 420

Query: 542  VNSHVSMASDAXXXXXXXXXXXXX-KRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAE 718
             +S +SMAS A              KRM+KI+KEESQT S+GISTAIGSKKVGAPLYWAE
Sbjct: 421  GSSKISMASSASESPSRSSTLTPPSKRMRKIKKEESQTSSDGISTAIGSKKVGAPLYWAE 480

Query: 719  VFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTK 898
            VFC GENLTGKWVHVDA+N I+DGEHKVEAAA ACKKSLRYVVAFAG GAKDVTRRYCTK
Sbjct: 481  VFCCGENLTGKWVHVDAINGIVDGEHKVEAAALACKKSLRYVVAFAGQGAKDVTRRYCTK 540

Query: 899  WYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEASCQKKVEVSQVEPS------- 1057
            WYKVAA+R+NS+WWDAVL PL+ELESGATGG V++E EAS  +K E SQV  S       
Sbjct: 541  WYKVAAKRVNSSWWDAVLAPLRELESGATGGGVNLEYEASSHEKNEESQVANSNHGCSID 600

Query: 1058 MSNSCGASMDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYV 1237
             ++SCGA  +  EK+   S MR SFASTR SLEDMELETRAL EPLPTNQQAYRNH LYV
Sbjct: 601  KNHSCGACKECSEKQVEGSSMRKSFASTRSSLEDMELETRALTEPLPTNQQAYRNHQLYV 660

Query: 1238 IERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKR 1417
            IERWL K ++LYPKGPVLGFCSGH+VYPRTCV+TL TKERW REGLQVKAGEVP KVLKR
Sbjct: 661  IERWLNKNQVLYPKGPVLGFCSGHAVYPRTCVRTLRTKERWFREGLQVKAGEVPAKVLKR 720

Query: 1418 SMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKC 1597
            S+K  KEEA DDN+Y + DHQ IT+LYG+WQTEPL LPRAVNGIVPKNERG+VDVWSEKC
Sbjct: 721  SLKRGKEEAADDNNYTDGDHQDITALYGRWQTEPLHLPRAVNGIVPKNERGRVDVWSEKC 780

Query: 1598 LPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXX 1777
            LPPGT+HLRLPRVA VA+RLDID+A AMVGF+FRNGRS PLFEGIVVCTEFKDAIL    
Sbjct: 781  LPPGTVHLRLPRVAAVAKRLDIDYAHAMVGFEFRNGRSAPLFEGIVVCTEFKDAILQAYL 840

Query: 1778 XXXXXXXXXXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYN 1957
                             ALSRWYQLLSSIITR+RLN CYG GAL Q S EIPKS DKC  
Sbjct: 841  EEEERREAEEKRRNEALALSRWYQLLSSIITRQRLNSCYGAGALSQPSSEIPKSDDKC-- 898

Query: 1958 SSATATATQKTEASPECQQVNIPEKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCH 2137
             S +AT  Q+  ASP CQQ +  EK     SMP ENHEHEF+LD++   E G T++KRC 
Sbjct: 899  -STSATRAQEIVASPRCQQDDTSEKPYVLPSMPEENHEHEFVLDKEVFGEEGPTQVKRCR 957

Query: 2138 CGFSIQFEEL 2167
            CGF +QFE +
Sbjct: 958  CGFLVQFETI 967


>gb|PIM98418.1| Nucleotide excision repair complex XPC-HR23B, subunit XPC/DPB11
            [Handroanthus impetiginosus]
          Length = 647

 Score =  970 bits (2507), Expect = 0.0
 Identities = 499/654 (76%), Positives = 532/654 (81%), Gaps = 9/654 (1%)
 Frame = +2

Query: 233  MVAGPSCSSAYTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMS 412
            MVAGPSCSS+ TVK SP +EQ SSQTA+RGAGR KADK RKHEL++Q S   D+P DKMS
Sbjct: 1    MVAGPSCSSSCTVKSSPEIEQGSSQTAVRGAGRVKADKPRKHELEAQGSRTIDEPKDKMS 60

Query: 413  EVSVSEVPTDTSEPCLVKSEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXX 592
            + SVSE PTD  EP LVK E LKRKGDLEFQMQLEMALSATA+ +S +SMAS+A      
Sbjct: 61   DKSVSEAPTDILEPRLVKYEALKRKGDLEFQMQLEMALSATAIGSSKISMASNASESPST 120

Query: 593  XXXXXXX-KRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDA 769
                    K+ KKI KEESQ+ S+GISTAIGSKKVGAPLYWAEVFC GENLTGKWVHVD 
Sbjct: 121  SSILAPPSKKFKKITKEESQSSSHGISTAIGSKKVGAPLYWAEVFCSGENLTGKWVHVDV 180

Query: 770  VNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAV 949
            VNAIIDGEHKVEAAAAACKK LRYVVAFAGHGAKDVTRRYCTKWYKVAAQRIN TWWDAV
Sbjct: 181  VNAIIDGEHKVEAAAAACKKPLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINLTWWDAV 240

Query: 950  LEPLKELESGATGGVVSVECEASCQKKVEVSQVEP-------SMSNSCGASMDSCEKKAT 1108
            L PLKELESGATGGVV +EC+ S  +K+E SQV          ++NS GAS +  EK A 
Sbjct: 241  LAPLKELESGATGGVVQLECKDSGHEKIEASQVADLNHGCLLDVNNSFGASEECREKNAV 300

Query: 1109 ESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPV 1288
            ES MRNSFASTR SLEDMELETRAL EPLPTNQQAYR HHLYVIERWLKKYEILYPKGPV
Sbjct: 301  ESSMRNSFASTRSSLEDMELETRALTEPLPTNQQAYRTHHLYVIERWLKKYEILYPKGPV 360

Query: 1289 LGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAE 1468
            LGFCSGH VYPR CVQTLHTKERWLREGLQVKAGEVP KVLKRS+K SKEEA DDNDYA+
Sbjct: 361  LGFCSGHPVYPRACVQTLHTKERWLREGLQVKAGEVPAKVLKRSLKRSKEEAEDDNDYAD 420

Query: 1469 VDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVA 1648
             DHQGIT+LYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGT+HLR PR+A+VA
Sbjct: 421  GDHQGITALYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTVHLRFPRIASVA 480

Query: 1649 RRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXXQ 1828
            +RLDIDFAPAMVGFDFRNGR VPLFEGIVVCTEF DAIL                     
Sbjct: 481  KRLDIDFAPAMVGFDFRNGRCVPLFEGIVVCTEFTDAILEAYLEEEERREAEEKRKNEAL 540

Query: 1829 ALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQKTEASPEC 2008
            ALSRWYQLLSSIITR+RLN CYGDG L QSSIEI K  D+C       +  QK EASP  
Sbjct: 541  ALSRWYQLLSSIITRQRLNNCYGDGTLSQSSIEILKLDDQC-------SKPQKGEASPGR 593

Query: 2009 QQVNIPEKLNAPSSMPTENHEHEFILDEKKVDE-GGLTRIKRCHCGFSIQFEEL 2167
            QQVN PEK + P SMPTENHEHEFILDEK +DE GG TRIKRCHCGFSIQFEEL
Sbjct: 594  QQVNTPEKCDVPPSMPTENHEHEFILDEKVLDENGGQTRIKRCHCGFSIQFEEL 647


>ref|XP_022884611.1| DNA repair protein RAD4 isoform X2 [Olea europaea var. sylvestris]
          Length = 977

 Score =  914 bits (2362), Expect = 0.0
 Identities = 477/732 (65%), Positives = 549/732 (75%), Gaps = 11/732 (1%)
 Frame = +2

Query: 5    AEKSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSV 184
            AEKSCH ALAS LETREG+ E VAALSVALFRA+NLTTRFVSILDV S+KPDA K  S+ 
Sbjct: 251  AEKSCHLALASALETREGTAEEVAALSVALFRAMNLTTRFVSILDVASMKPDAYKCSSTN 310

Query: 185  ADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVE-QDSSQTAIRGAGRQKADKSRKHE 361
            +   K  + IF+SSTLMVAGPSC      K S + + Q  SQ  +RG+G   A+KS KHE
Sbjct: 311  SGVSKGGKGIFNSSTLMVAGPSCLFDSPSKLSSFDDMQKGSQCPVRGSGESMAEKSMKHE 370

Query: 362  LQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGLKRKGDLEFQMQLEMALSATAV 541
             QS    +TDK TD  S+ S +E  T  S P L++SEGLKRKGDLEF+MQL++ALSATA+
Sbjct: 371  FQSHGIFVTDKSTDGKSD-SFTEAGTAASVPDLMESEGLKRKGDLEFEMQLKIALSATAI 429

Query: 542  VNSHVSMA-SDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAE 718
             +S  +MA S               KRMKKI  E S + SNGIST+IGSKKVGAPLYWAE
Sbjct: 430  ESSKSTMAPSVVDSPSNSSTITPPYKRMKKIMTEGSSSSSNGISTSIGSKKVGAPLYWAE 489

Query: 719  VFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTK 898
            VFC GENLTGKWVHVDAVNAIIDGE KVEAAA+ACKKSLRYVVAFAGHGAKDVTRRYCTK
Sbjct: 490  VFCNGENLTGKWVHVDAVNAIIDGEQKVEAAASACKKSLRYVVAFAGHGAKDVTRRYCTK 549

Query: 899  WYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEASCQKKVEVSQVEPSMSNSC-- 1072
            WYK+A+QRINSTWWD VL PLKELESGAT GV+++E EAS  +++E  +        C  
Sbjct: 550  WYKIASQRINSTWWDRVLAPLKELESGATSGVINLEQEASVGEEMEALRGADQSGRECLL 609

Query: 1073 ------GASMDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLY 1234
                  G S + C  KA  S M+NS  ++R SLEDMELETRAL EPLPTNQQAY+NHHLY
Sbjct: 610  KTKQLCGES-EECSDKAAVSLMKNSVEASRSSLEDMELETRALTEPLPTNQQAYKNHHLY 668

Query: 1235 VIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLK 1414
             IERWLKKYEI+YPKGPVLGFCSGH VYPRTCVQTLHTKERWLREGLQVK  E+P KVLK
Sbjct: 669  AIERWLKKYEIMYPKGPVLGFCSGHPVYPRTCVQTLHTKERWLREGLQVKVDELPAKVLK 728

Query: 1415 RSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEK 1594
            RS+  SKE+A  D++Y+EVD +G  SLYGKWQT+ LCLP+A+NGIVPKNERG+VDVWSEK
Sbjct: 729  RSLNRSKEQAHVDDEYSEVDPEGTVSLYGKWQTKKLCLPQAINGIVPKNERGRVDVWSEK 788

Query: 1595 CLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXX 1774
            CLPPGT+HLRLPRV  VA+RLDID+APAMVGF+FRNGRS P+ EGIVVC E+KDAIL   
Sbjct: 789  CLPPGTVHLRLPRVGLVAKRLDIDYAPAMVGFEFRNGRSFPVVEGIVVCAEYKDAILEAY 848

Query: 1775 XXXXXXXXXXXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCY 1954
                              ALSRWYQLLSSIITR+RL  CYGDG   Q SI+IP   +K  
Sbjct: 849  AEEEERRMAEEKRRNEALALSRWYQLLSSIITRQRLKNCYGDGDSSQPSIDIPIPNNK-- 906

Query: 1955 NSSATATATQKTEASPECQQVNIP-EKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKR 2131
             S    + T +   SP C QVN P EK NAP+++PT+NHEHEFI+D++  DE    R+K+
Sbjct: 907  -SCIPPSRTNQKNVSPRCHQVNTPDEKHNAPATVPTQNHEHEFIMDDQTFDEESSLRVKK 965

Query: 2132 CHCGFSIQFEEL 2167
            C CGFSIQFEEL
Sbjct: 966  CWCGFSIQFEEL 977


>ref|XP_022884610.1| DNA repair protein RAD4 isoform X1 [Olea europaea var. sylvestris]
          Length = 990

 Score =  905 bits (2338), Expect = 0.0
 Identities = 477/745 (64%), Positives = 549/745 (73%), Gaps = 24/745 (3%)
 Frame = +2

Query: 5    AEKSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSV 184
            AEKSCH ALAS LETREG+ E VAALSVALFRA+NLTTRFVSILDV S+KPDA K  S+ 
Sbjct: 251  AEKSCHLALASALETREGTAEEVAALSVALFRAMNLTTRFVSILDVASMKPDAYKCSSTN 310

Query: 185  ADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVE-QDSSQTAIRGAGRQKADKSRKHE 361
            +   K  + IF+SSTLMVAGPSC      K S + + Q  SQ  +RG+G   A+KS KHE
Sbjct: 311  SGVSKGGKGIFNSSTLMVAGPSCLFDSPSKLSSFDDMQKGSQCPVRGSGESMAEKSMKHE 370

Query: 362  LQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGLKRKGDLEFQMQLEMALSATAV 541
             QS    +TDK TD  S+ S +E  T  S P L++SEGLKRKGDLEF+MQL++ALSATA+
Sbjct: 371  FQSHGIFVTDKSTDGKSD-SFTEAGTAASVPDLMESEGLKRKGDLEFEMQLKIALSATAI 429

Query: 542  VNSHVSMA-SDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAE 718
             +S  +MA S               KRMKKI  E S + SNGIST+IGSKKVGAPLYWAE
Sbjct: 430  ESSKSTMAPSVVDSPSNSSTITPPYKRMKKIMTEGSSSSSNGISTSIGSKKVGAPLYWAE 489

Query: 719  VFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRR---- 886
            VFC GENLTGKWVHVDAVNAIIDGE KVEAAA+ACKKSLRYVVAFAGHGAKDVTRR    
Sbjct: 490  VFCNGENLTGKWVHVDAVNAIIDGEQKVEAAASACKKSLRYVVAFAGHGAKDVTRRFQIF 549

Query: 887  ---------YCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEASCQKKVEV 1039
                     YCTKWYK+A+QRINSTWWD VL PLKELESGAT GV+++E EAS  +++E 
Sbjct: 550  DLIFAMLFWYCTKWYKIASQRINSTWWDRVLAPLKELESGATSGVINLEQEASVGEEMEA 609

Query: 1040 SQVEPSMSNSC--------GASMDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPL 1195
             +        C        G S + C  KA  S M+NS  ++R SLEDMELETRAL EPL
Sbjct: 610  LRGADQSGRECLLKTKQLCGES-EECSDKAAVSLMKNSVEASRSSLEDMELETRALTEPL 668

Query: 1196 PTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGL 1375
            PTNQQAY+NHHLY IERWLKKYEI+YPKGPVLGFCSGH VYPRTCVQTLHTKERWLREGL
Sbjct: 669  PTNQQAYKNHHLYAIERWLKKYEIMYPKGPVLGFCSGHPVYPRTCVQTLHTKERWLREGL 728

Query: 1376 QVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVP 1555
            QVK  E+P KVLKRS+  SKE+A  D++Y+EVD +G  SLYGKWQT+ LCLP+A+NGIVP
Sbjct: 729  QVKVDELPAKVLKRSLNRSKEQAHVDDEYSEVDPEGTVSLYGKWQTKKLCLPQAINGIVP 788

Query: 1556 KNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIV 1735
            KNERG+VDVWSEKCLPPGT+HLRLPRV  VA+RLDID+APAMVGF+FRNGRS P+ EGIV
Sbjct: 789  KNERGRVDVWSEKCLPPGTVHLRLPRVGLVAKRLDIDYAPAMVGFEFRNGRSFPVVEGIV 848

Query: 1736 VCTEFKDAILXXXXXXXXXXXXXXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQ 1915
            VC E+KDAIL                     ALSRWYQLLSSIITR+RL  CYGDG   Q
Sbjct: 849  VCAEYKDAILEAYAEEEERRMAEEKRRNEALALSRWYQLLSSIITRQRLKNCYGDGDSSQ 908

Query: 1916 SSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIP-EKLNAPSSMPTENHEHEFILDE 2092
             SI+IP   +K   S    + T +   SP C QVN P EK NAP+++PT+NHEHEFI+D+
Sbjct: 909  PSIDIPIPNNK---SCIPPSRTNQKNVSPRCHQVNTPDEKHNAPATVPTQNHEHEFIMDD 965

Query: 2093 KKVDEGGLTRIKRCHCGFSIQFEEL 2167
            +  DE    R+K+C CGFSIQFEEL
Sbjct: 966  QTFDEESSLRVKKCWCGFSIQFEEL 990


>ref|XP_019182670.1| PREDICTED: DNA repair protein RAD4 [Ipomoea nil]
 ref|XP_019182671.1| PREDICTED: DNA repair protein RAD4 [Ipomoea nil]
 ref|XP_019182672.1| PREDICTED: DNA repair protein RAD4 [Ipomoea nil]
          Length = 984

 Score =  798 bits (2061), Expect = 0.0
 Identities = 428/743 (57%), Positives = 516/743 (69%), Gaps = 23/743 (3%)
 Frame = +2

Query: 8    EKSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADK---SES 178
            EKS H A+ STLE++EGSPE VAALSVALFRALN+T RFVSILDV SLKP  DK   S+ 
Sbjct: 257  EKSIHSAMRSTLESQEGSPEVVAALSVALFRALNITARFVSILDVASLKPGVDKPDLSDQ 316

Query: 179  SVADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQDSSQTAIRG----AGRQKADK 346
               D  +  RDIF++STLMVAG   SS     P  ++      +  +     A + K+ K
Sbjct: 317  GHQDPRRKGRDIFNTSTLMVAG---SSHPPESPEGHLASSDKGSVCKSPSSDAKKTKSGK 373

Query: 347  SRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGLKRKGDLEFQMQLEMAL 526
            S +   +S DS + D    ++ ++S SE   ++S+ C ++ E  KRKGD+EF+MQLEMAL
Sbjct: 374  SLRKTSKSSDSSLADTLKHRVLDLSTSEAQNNSSDTCPMQREQPKRKGDVEFEMQLEMAL 433

Query: 527  SATAVVNSHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPL 706
            SATA+ +S  +   +              KRMKKI+ EE    S+GISTAIGSKK+GAPL
Sbjct: 434  SATAMESSRENFVPNVVEAHGTSSNHSPHKRMKKIKAEECAASSHGISTAIGSKKIGAPL 493

Query: 707  YWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRR 886
            YWAEV+C  ENLTGKWVHVDAVNA++DGE  VEAAAAACK  LRYV+AFAG+GAKDVTRR
Sbjct: 494  YWAEVYCSSENLTGKWVHVDAVNALVDGEQNVEAAAAACKIPLRYVIAFAGNGAKDVTRR 553

Query: 887  YCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEAS------------CQKK 1030
            YCTKWYK+ ++R+NS WWDAVLEPLK+LE+GA   +   + E S            C  K
Sbjct: 554  YCTKWYKIVSKRVNSLWWDAVLEPLKKLEAGAVDDLSHFKHEGSNGTESIKPLNGTCHPK 613

Query: 1031 VEV---SQVEPSMSNSCGASMDSC-EKKATESFMRNSFASTRGSLEDMELETRALIEPLP 1198
             E    S   P   NS   +++ C EK+ ++S  R S A++R  LEDMELETRAL EPLP
Sbjct: 614  REQPLESTTLPLKFNS--EALEECSEKRYSQSSSRASVAASRSDLEDMELETRALTEPLP 671

Query: 1199 TNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQ 1378
            TNQQAYR H LY IERWL KY+ILYPKGPVLGFCSGH VYPRTCVQTLHTKERWLR+GLQ
Sbjct: 672  TNQQAYRTHQLYAIERWLNKYQILYPKGPVLGFCSGHPVYPRTCVQTLHTKERWLRDGLQ 731

Query: 1379 VKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPK 1558
            VKA E+PVKVLKRS K SKE  G+D++ A  D  G T+LYG+WQTEPLCLP AVNGIVPK
Sbjct: 732  VKANELPVKVLKRSQKQSKELVGEDDESAAGDPSGTTALYGRWQTEPLCLPPAVNGIVPK 791

Query: 1559 NERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVV 1738
            NERGQVDVWSEKCLPPGT+HLRLPR+  VA+RL+ID+APAMVGFDFRNGRSVP+FEGIVV
Sbjct: 792  NERGQVDVWSEKCLPPGTVHLRLPRIFVVAKRLEIDYAPAMVGFDFRNGRSVPVFEGIVV 851

Query: 1739 CTEFKDAILXXXXXXXXXXXXXXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQS 1918
            CTEFKDAIL                    QALSRWYQLLSSIITR+RLN CY +G   QS
Sbjct: 852  CTEFKDAILEAYAEEEERRQAEENRKAEAQALSRWYQLLSSIITRQRLNNCYANGGPSQS 911

Query: 1919 SIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEKLNAPSSMPTENHEHEFILDEKK 2098
            +I+   S      +    ++++  + SPE +Q    E         T++H+H F+LD++ 
Sbjct: 912  TIDSESS------AKPGGSSSENQKMSPERKQ----ESKAGAVPAETDHHQHLFLLDDQT 961

Query: 2099 VDEGGLTRIKRCHCGFSIQFEEL 2167
             DE   TR KRC CGFSIQFEE+
Sbjct: 962  FDEESSTRTKRCRCGFSIQFEEM 984


>ref|XP_009589685.1| PREDICTED: DNA repair protein RAD4 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 858

 Score =  786 bits (2030), Expect = 0.0
 Identities = 427/724 (58%), Positives = 502/724 (69%), Gaps = 3/724 (0%)
 Frame = +2

Query: 5    AEKSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSV 184
            +EKS H ALASTLE++EG+PE VAALSVALFRALNLTTRFVSILDV SLKP+ +K   S 
Sbjct: 190  SEKSFHSALASTLESQEGTPEEVAALSVALFRALNLTTRFVSILDVASLKPEIEKPYPSG 249

Query: 185  ADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHEL 364
                K    IF+SSTLMVA P  S     K                 G+   DKSR    
Sbjct: 250  QSPSKAGSGIFNSSTLMVAAPKYSPLSPAKSL-------------ADGKHYNDKSR---- 292

Query: 365  QSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGLKRKGDLEFQMQLEMALSATAVV 544
                + ITDK   +MS  S S+   D ++ C++K E  KRKGDLEF+MQLEMALS+TAV 
Sbjct: 293  ----ATITDKSNKRMSP-STSDALRDANDACIMKREQPKRKGDLEFEMQLEMALSSTAVE 347

Query: 545  NSHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVF 724
                +M S+              K+ KKI+ EE  T S+G+STA+GS+KVGAPLYWAEV+
Sbjct: 348  IVRNTMVSEVADVQSTSSNVSPFKK-KKIKAEECSTSSHGLSTAVGSRKVGAPLYWAEVY 406

Query: 725  CGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWY 904
            C GENLTGKWVHVD VNAI DGE  VEAAAAACK  LRYVVAFAG+GAKDVTRRYCTKWY
Sbjct: 407  CSGENLTGKWVHVDVVNAITDGELNVEAAAAACKSHLRYVVAFAGNGAKDVTRRYCTKWY 466

Query: 905  KVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEASCQ-KKVEVSQVEPSMSNSCGAS 1081
            K+A++R+NS WWDAVL PLKELES AT  VV +  E S + KK EV+Q            
Sbjct: 467  KIASERVNSIWWDAVLAPLKELESVATSDVVHLRQETSDESKKTEVAQS----------- 515

Query: 1082 MDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKY 1261
                              +TR SLEDMELETRAL EPLPTNQQAYRNHHLY+IERWL KY
Sbjct: 516  -----------------TATRSSLEDMELETRALTEPLPTNQQAYRNHHLYIIERWLNKY 558

Query: 1262 EILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEE 1441
            +ILYPKGPVLGFCSGH VYPR+CVQTL  KE+WLREGLQVKA E+P KVLK S K +KE+
Sbjct: 559  QILYPKGPVLGFCSGHPVYPRSCVQTLKRKEKWLREGLQVKANEIPAKVLKHSGKQNKEQ 618

Query: 1442 AGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHL 1621
               D+DY E D  G  +LYG+WQTEPL LP AVNGIVPKNERGQVDVWSEKCLPPGT+HL
Sbjct: 619  DVKDDDYGEEDCGGTVALYGQWQTEPLFLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHL 678

Query: 1622 RLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXX 1801
            RLPR+  VA+RL+IDFAPAMVGF+FRNGRS+P++EGIVVC EFKDAIL            
Sbjct: 679  RLPRLVPVAKRLEIDFAPAMVGFEFRNGRSLPVYEGIVVCIEFKDAILETYAEEEERRQA 738

Query: 1802 XXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATAT 1981
                    +ALSRWYQLL+S+ITR+RL+ CY DGA  QS+I    S DK   SS  A  T
Sbjct: 739  NERKRSEAEALSRWYQLLASLITRQRLHNCYADGASSQSAINFATSNDK---SSLLARGT 795

Query: 1982 QKTEASPECQQ--VNIPEKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQ 2155
            + T+ +PE QQ    I + + +PS++  E+HEH F+++++ VDE   TR KRC CGFS+Q
Sbjct: 796  EDTKTTPEYQQEKSEIAQSI-SPSTVLAEDHEHVFLVEDQTVDEESSTRTKRCRCGFSVQ 854

Query: 2156 FEEL 2167
            +EEL
Sbjct: 855  YEEL 858


>ref|XP_016499274.1| PREDICTED: DNA repair protein RAD4-like isoform X2 [Nicotiana
            tabacum]
          Length = 858

 Score =  785 bits (2027), Expect = 0.0
 Identities = 427/724 (58%), Positives = 501/724 (69%), Gaps = 3/724 (0%)
 Frame = +2

Query: 5    AEKSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSV 184
            +EKS H ALASTLE++EG+PE VAALSVALFRALNLTTRFVSILDV SLKP+ +K   S 
Sbjct: 190  SEKSFHSALASTLESQEGTPEEVAALSVALFRALNLTTRFVSILDVASLKPEIEKPYPSG 249

Query: 185  ADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHEL 364
                K    IF+SSTLMVA P  S     K                 G+   DKSR    
Sbjct: 250  QSPSKAGSGIFNSSTLMVAAPKYSPLSPAKSL-------------ADGKHYNDKSR---- 292

Query: 365  QSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGLKRKGDLEFQMQLEMALSATAVV 544
                + ITDK   +MS  S S+   D ++ C++K E  KRKGDLEF+MQLEMALS+TAV 
Sbjct: 293  ----ATITDKSNKRMSP-STSDALRDANDACIMKREQPKRKGDLEFEMQLEMALSSTAVE 347

Query: 545  NSHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVF 724
                +M S+              K+ KKI+ EE  T S+G+STA+GS+KVGAPLYWAEV+
Sbjct: 348  IVRNTMVSEVADVQSTSSNVSPFKK-KKIKAEECSTSSHGLSTAVGSRKVGAPLYWAEVY 406

Query: 725  CGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWY 904
            C GENLTGKWVHVD VNAI DGE  VEAAAAACK  LRYVVAFAG+GAKDVTRRYCTKWY
Sbjct: 407  CSGENLTGKWVHVDVVNAITDGELNVEAAAAACKSHLRYVVAFAGNGAKDVTRRYCTKWY 466

Query: 905  KVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEASCQ-KKVEVSQVEPSMSNSCGAS 1081
            K+A++R+NS WWDAVL PLKELES AT  VV +  E S + KK EV+Q            
Sbjct: 467  KIASERVNSIWWDAVLAPLKELESVATSDVVHLRQETSDESKKTEVAQS----------- 515

Query: 1082 MDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKY 1261
                              +TR SLEDMELETRAL EPLPTNQQAYRNHHLY+IERWL KY
Sbjct: 516  -----------------TATRSSLEDMELETRALTEPLPTNQQAYRNHHLYIIERWLNKY 558

Query: 1262 EILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEE 1441
            +ILYPKGPVLGFCSGH VYPR+CVQTL  KE+WLREGLQVKA E+P KVLK S K  KE+
Sbjct: 559  QILYPKGPVLGFCSGHPVYPRSCVQTLKRKEKWLREGLQVKANEIPAKVLKHSGKQKKEQ 618

Query: 1442 AGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHL 1621
               D+DY E D  G  +LYG+WQTEPL LP AVNGIVPKNERGQVDVWSEKCLPPGT+HL
Sbjct: 619  DVKDDDYGEEDCGGTVALYGQWQTEPLFLPPAVNGIVPKNERGQVDVWSEKCLPPGTVHL 678

Query: 1622 RLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXX 1801
            RLPR+  VA+RL+IDFAPAMVGF+FRNGRS+P++EGIVVC EFKDAIL            
Sbjct: 679  RLPRLVPVAKRLEIDFAPAMVGFEFRNGRSLPVYEGIVVCIEFKDAILETYAEEEERRQA 738

Query: 1802 XXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATAT 1981
                    +ALSRWYQLL+S+ITR+RL+ CY DGA  QS+I    S DK   SS  A  T
Sbjct: 739  NERKRSEAEALSRWYQLLASLITRQRLHNCYADGASSQSAINFATSNDK---SSLLARGT 795

Query: 1982 QKTEASPECQQ--VNIPEKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQ 2155
            + T+ +PE QQ    I + + +PS++  E+HEH F+++++ VDE   TR KRC CGFS+Q
Sbjct: 796  EDTKTTPEYQQEKSEIAQSI-SPSTVLAEDHEHVFLVEDQTVDEESSTRTKRCRCGFSVQ 854

Query: 2156 FEEL 2167
            +EEL
Sbjct: 855  YEEL 858


>ref|XP_009589684.1| PREDICTED: DNA repair protein RAD4 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 932

 Score =  786 bits (2030), Expect = 0.0
 Identities = 427/724 (58%), Positives = 502/724 (69%), Gaps = 3/724 (0%)
 Frame = +2

Query: 5    AEKSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSV 184
            +EKS H ALASTLE++EG+PE VAALSVALFRALNLTTRFVSILDV SLKP+ +K   S 
Sbjct: 264  SEKSFHSALASTLESQEGTPEEVAALSVALFRALNLTTRFVSILDVASLKPEIEKPYPSG 323

Query: 185  ADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHEL 364
                K    IF+SSTLMVA P  S     K                 G+   DKSR    
Sbjct: 324  QSPSKAGSGIFNSSTLMVAAPKYSPLSPAKSL-------------ADGKHYNDKSR---- 366

Query: 365  QSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGLKRKGDLEFQMQLEMALSATAVV 544
                + ITDK   +MS  S S+   D ++ C++K E  KRKGDLEF+MQLEMALS+TAV 
Sbjct: 367  ----ATITDKSNKRMSP-STSDALRDANDACIMKREQPKRKGDLEFEMQLEMALSSTAVE 421

Query: 545  NSHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVF 724
                +M S+              K+ KKI+ EE  T S+G+STA+GS+KVGAPLYWAEV+
Sbjct: 422  IVRNTMVSEVADVQSTSSNVSPFKK-KKIKAEECSTSSHGLSTAVGSRKVGAPLYWAEVY 480

Query: 725  CGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWY 904
            C GENLTGKWVHVD VNAI DGE  VEAAAAACK  LRYVVAFAG+GAKDVTRRYCTKWY
Sbjct: 481  CSGENLTGKWVHVDVVNAITDGELNVEAAAAACKSHLRYVVAFAGNGAKDVTRRYCTKWY 540

Query: 905  KVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEASCQ-KKVEVSQVEPSMSNSCGAS 1081
            K+A++R+NS WWDAVL PLKELES AT  VV +  E S + KK EV+Q            
Sbjct: 541  KIASERVNSIWWDAVLAPLKELESVATSDVVHLRQETSDESKKTEVAQS----------- 589

Query: 1082 MDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKY 1261
                              +TR SLEDMELETRAL EPLPTNQQAYRNHHLY+IERWL KY
Sbjct: 590  -----------------TATRSSLEDMELETRALTEPLPTNQQAYRNHHLYIIERWLNKY 632

Query: 1262 EILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEE 1441
            +ILYPKGPVLGFCSGH VYPR+CVQTL  KE+WLREGLQVKA E+P KVLK S K +KE+
Sbjct: 633  QILYPKGPVLGFCSGHPVYPRSCVQTLKRKEKWLREGLQVKANEIPAKVLKHSGKQNKEQ 692

Query: 1442 AGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHL 1621
               D+DY E D  G  +LYG+WQTEPL LP AVNGIVPKNERGQVDVWSEKCLPPGT+HL
Sbjct: 693  DVKDDDYGEEDCGGTVALYGQWQTEPLFLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHL 752

Query: 1622 RLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXX 1801
            RLPR+  VA+RL+IDFAPAMVGF+FRNGRS+P++EGIVVC EFKDAIL            
Sbjct: 753  RLPRLVPVAKRLEIDFAPAMVGFEFRNGRSLPVYEGIVVCIEFKDAILETYAEEEERRQA 812

Query: 1802 XXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATAT 1981
                    +ALSRWYQLL+S+ITR+RL+ CY DGA  QS+I    S DK   SS  A  T
Sbjct: 813  NERKRSEAEALSRWYQLLASLITRQRLHNCYADGASSQSAINFATSNDK---SSLLARGT 869

Query: 1982 QKTEASPECQQ--VNIPEKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQ 2155
            + T+ +PE QQ    I + + +PS++  E+HEH F+++++ VDE   TR KRC CGFS+Q
Sbjct: 870  EDTKTTPEYQQEKSEIAQSI-SPSTVLAEDHEHVFLVEDQTVDEESSTRTKRCRCGFSVQ 928

Query: 2156 FEEL 2167
            +EEL
Sbjct: 929  YEEL 932


>ref|XP_016499273.1| PREDICTED: DNA repair protein RAD4-like isoform X1 [Nicotiana
            tabacum]
          Length = 932

 Score =  785 bits (2027), Expect = 0.0
 Identities = 427/724 (58%), Positives = 501/724 (69%), Gaps = 3/724 (0%)
 Frame = +2

Query: 5    AEKSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSV 184
            +EKS H ALASTLE++EG+PE VAALSVALFRALNLTTRFVSILDV SLKP+ +K   S 
Sbjct: 264  SEKSFHSALASTLESQEGTPEEVAALSVALFRALNLTTRFVSILDVASLKPEIEKPYPSG 323

Query: 185  ADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHEL 364
                K    IF+SSTLMVA P  S     K                 G+   DKSR    
Sbjct: 324  QSPSKAGSGIFNSSTLMVAAPKYSPLSPAKSL-------------ADGKHYNDKSR---- 366

Query: 365  QSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGLKRKGDLEFQMQLEMALSATAVV 544
                + ITDK   +MS  S S+   D ++ C++K E  KRKGDLEF+MQLEMALS+TAV 
Sbjct: 367  ----ATITDKSNKRMSP-STSDALRDANDACIMKREQPKRKGDLEFEMQLEMALSSTAVE 421

Query: 545  NSHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVF 724
                +M S+              K+ KKI+ EE  T S+G+STA+GS+KVGAPLYWAEV+
Sbjct: 422  IVRNTMVSEVADVQSTSSNVSPFKK-KKIKAEECSTSSHGLSTAVGSRKVGAPLYWAEVY 480

Query: 725  CGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWY 904
            C GENLTGKWVHVD VNAI DGE  VEAAAAACK  LRYVVAFAG+GAKDVTRRYCTKWY
Sbjct: 481  CSGENLTGKWVHVDVVNAITDGELNVEAAAAACKSHLRYVVAFAGNGAKDVTRRYCTKWY 540

Query: 905  KVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEASCQ-KKVEVSQVEPSMSNSCGAS 1081
            K+A++R+NS WWDAVL PLKELES AT  VV +  E S + KK EV+Q            
Sbjct: 541  KIASERVNSIWWDAVLAPLKELESVATSDVVHLRQETSDESKKTEVAQS----------- 589

Query: 1082 MDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKY 1261
                              +TR SLEDMELETRAL EPLPTNQQAYRNHHLY+IERWL KY
Sbjct: 590  -----------------TATRSSLEDMELETRALTEPLPTNQQAYRNHHLYIIERWLNKY 632

Query: 1262 EILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEE 1441
            +ILYPKGPVLGFCSGH VYPR+CVQTL  KE+WLREGLQVKA E+P KVLK S K  KE+
Sbjct: 633  QILYPKGPVLGFCSGHPVYPRSCVQTLKRKEKWLREGLQVKANEIPAKVLKHSGKQKKEQ 692

Query: 1442 AGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHL 1621
               D+DY E D  G  +LYG+WQTEPL LP AVNGIVPKNERGQVDVWSEKCLPPGT+HL
Sbjct: 693  DVKDDDYGEEDCGGTVALYGQWQTEPLFLPPAVNGIVPKNERGQVDVWSEKCLPPGTVHL 752

Query: 1622 RLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXX 1801
            RLPR+  VA+RL+IDFAPAMVGF+FRNGRS+P++EGIVVC EFKDAIL            
Sbjct: 753  RLPRLVPVAKRLEIDFAPAMVGFEFRNGRSLPVYEGIVVCIEFKDAILETYAEEEERRQA 812

Query: 1802 XXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATAT 1981
                    +ALSRWYQLL+S+ITR+RL+ CY DGA  QS+I    S DK   SS  A  T
Sbjct: 813  NERKRSEAEALSRWYQLLASLITRQRLHNCYADGASSQSAINFATSNDK---SSLLARGT 869

Query: 1982 QKTEASPECQQ--VNIPEKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQ 2155
            + T+ +PE QQ    I + + +PS++  E+HEH F+++++ VDE   TR KRC CGFS+Q
Sbjct: 870  EDTKTTPEYQQEKSEIAQSI-SPSTVLAEDHEHVFLVEDQTVDEESSTRTKRCRCGFSVQ 928

Query: 2156 FEEL 2167
            +EEL
Sbjct: 929  YEEL 932


>ref|XP_011007252.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X2 [Populus euphratica]
          Length = 847

 Score =  777 bits (2007), Expect = 0.0
 Identities = 419/730 (57%), Positives = 510/730 (69%), Gaps = 10/730 (1%)
 Frame = +2

Query: 8    EKSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSVA 187
            ++S H AL+  LETREG+ E +AALSVALFRAL LTTRFVSILDV S+KPDADK ES   
Sbjct: 128  KRSFHSALSCALETREGTLEELAALSVALFRALKLTTRFVSILDVASIKPDADKYESLNQ 187

Query: 188  DGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQ 367
            D  K  R IFS+STLMV  P         PS   +++ ++T+ + + + K + SR  ++Q
Sbjct: 188  DTSKMRRGIFSTSTLMVDRPKEVFIPPKSPSCSEKKNVAETSSKASCKSKDNCSRSKKIQ 247

Query: 368  SQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVK-SEGLKRKGDLEFQMQLEMALSATAVV 544
            S DS    +  DKM +V   EV  +TSE C+ K S+G KRKGDLEF+MQL+MA+SATAV 
Sbjct: 248  SNDSPPAVELKDKMVDVFPCEVQNNTSEECVTKKSQGSKRKGDLEFEMQLQMAMSATAVA 307

Query: 545  NSHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVF 724
                                   KR++K   EES   S GISTA+GS+K+G+PLYWAEV+
Sbjct: 308  TQSNKELDVKESNSNSSDVSSPFKRIRKNANEESS--SQGISTALGSRKIGSPLYWAEVY 365

Query: 725  CGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWY 904
            C GENLTGKWVHVDAV+ I+DGE KVEAAA ACK SLRYVVAFAG GAKDVTRRYC KWY
Sbjct: 366  CSGENLTGKWVHVDAVHDIVDGEQKVEAAADACKTSLRYVVAFAGLGAKDVTRRYCMKWY 425

Query: 905  KVAAQRINSTWWDAVLEPLKELESGATGGVVSVE---CEASCQKKVEVSQ--VEPSMSNS 1069
            K+A+QR+NS WWDAVL PL+ELESGATGG+  +E     AS + +  ++    +  M N 
Sbjct: 426  KIASQRVNSHWWDAVLAPLRELESGATGGMAHLEKPHANASNEHENVIASGLSDLPMPNE 485

Query: 1070 CGASMD----SCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYV 1237
              +++D    S  K   ES  RNSFA+TR ++EDMELETRAL EPLPTNQQAY+NH LY 
Sbjct: 486  LPSNVDLPKESGRKNDVESSGRNSFAATRNTIEDMELETRALTEPLPTNQQAYKNHSLYA 545

Query: 1238 IERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKR 1417
            IE+WL K +IL+PKGP+LGFCSGH VYPR CVQTL TKERWLREG+QVKA E+P KV+K+
Sbjct: 546  IEKWLTKCQILHPKGPILGFCSGHPVYPRACVQTLRTKERWLREGMQVKAKELPAKVVKQ 605

Query: 1418 SMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKC 1597
            S K  K +  +D+DY E D  G+  LYG WQ EPL LP AVNGIVPKNERGQVDVWSEKC
Sbjct: 606  SGKLKKVQFSEDDDYGETD-SGVVELYGMWQLEPLQLPHAVNGIVPKNERGQVDVWSEKC 664

Query: 1598 LPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXX 1777
            LPPGT+HLRLPRV  VA+RL+ID+APAMVGF+FRNGRSVP+F+GIVVC EFKDAIL    
Sbjct: 665  LPPGTVHLRLPRVFYVAKRLEIDYAPAMVGFEFRNGRSVPVFDGIVVCNEFKDAILEAYA 724

Query: 1778 XXXXXXXXXXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYN 1957
                            QA+SRWYQLLSSIITR+RLN  YG+G LPQ    +  + ++   
Sbjct: 725  EEEERRDAEEKKRNEAQAISRWYQLLSSIITRQRLNNSYGNGLLPQMPSNVENTNNQ--- 781

Query: 1958 SSATATATQKTEASPECQQVNIPEKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCH 2137
                  +TQ     P  Q+ +   KLNAPS   T++HEH F+++++  DE   TR KRCH
Sbjct: 782  PDVHVGSTQ----PPGHQKDSKDRKLNAPSMTLTDDHEHVFLVEDQSFDEQTSTRTKRCH 837

Query: 2138 CGFSIQFEEL 2167
            CGFS+Q EEL
Sbjct: 838  CGFSVQVEEL 847


>ref|XP_011007251.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X1 [Populus euphratica]
          Length = 966

 Score =  777 bits (2007), Expect = 0.0
 Identities = 419/730 (57%), Positives = 510/730 (69%), Gaps = 10/730 (1%)
 Frame = +2

Query: 8    EKSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSVA 187
            ++S H AL+  LETREG+ E +AALSVALFRAL LTTRFVSILDV S+KPDADK ES   
Sbjct: 247  KRSFHSALSCALETREGTLEELAALSVALFRALKLTTRFVSILDVASIKPDADKYESLNQ 306

Query: 188  DGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQ 367
            D  K  R IFS+STLMV  P         PS   +++ ++T+ + + + K + SR  ++Q
Sbjct: 307  DTSKMRRGIFSTSTLMVDRPKEVFIPPKSPSCSEKKNVAETSSKASCKSKDNCSRSKKIQ 366

Query: 368  SQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVK-SEGLKRKGDLEFQMQLEMALSATAVV 544
            S DS    +  DKM +V   EV  +TSE C+ K S+G KRKGDLEF+MQL+MA+SATAV 
Sbjct: 367  SNDSPPAVELKDKMVDVFPCEVQNNTSEECVTKKSQGSKRKGDLEFEMQLQMAMSATAVA 426

Query: 545  NSHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVF 724
                                   KR++K   EES   S GISTA+GS+K+G+PLYWAEV+
Sbjct: 427  TQSNKELDVKESNSNSSDVSSPFKRIRKNANEESS--SQGISTALGSRKIGSPLYWAEVY 484

Query: 725  CGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWY 904
            C GENLTGKWVHVDAV+ I+DGE KVEAAA ACK SLRYVVAFAG GAKDVTRRYC KWY
Sbjct: 485  CSGENLTGKWVHVDAVHDIVDGEQKVEAAADACKTSLRYVVAFAGLGAKDVTRRYCMKWY 544

Query: 905  KVAAQRINSTWWDAVLEPLKELESGATGGVVSVE---CEASCQKKVEVSQ--VEPSMSNS 1069
            K+A+QR+NS WWDAVL PL+ELESGATGG+  +E     AS + +  ++    +  M N 
Sbjct: 545  KIASQRVNSHWWDAVLAPLRELESGATGGMAHLEKPHANASNEHENVIASGLSDLPMPNE 604

Query: 1070 CGASMD----SCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYV 1237
              +++D    S  K   ES  RNSFA+TR ++EDMELETRAL EPLPTNQQAY+NH LY 
Sbjct: 605  LPSNVDLPKESGRKNDVESSGRNSFAATRNTIEDMELETRALTEPLPTNQQAYKNHSLYA 664

Query: 1238 IERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKR 1417
            IE+WL K +IL+PKGP+LGFCSGH VYPR CVQTL TKERWLREG+QVKA E+P KV+K+
Sbjct: 665  IEKWLTKCQILHPKGPILGFCSGHPVYPRACVQTLRTKERWLREGMQVKAKELPAKVVKQ 724

Query: 1418 SMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKC 1597
            S K  K +  +D+DY E D  G+  LYG WQ EPL LP AVNGIVPKNERGQVDVWSEKC
Sbjct: 725  SGKLKKVQFSEDDDYGETD-SGVVELYGMWQLEPLQLPHAVNGIVPKNERGQVDVWSEKC 783

Query: 1598 LPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXX 1777
            LPPGT+HLRLPRV  VA+RL+ID+APAMVGF+FRNGRSVP+F+GIVVC EFKDAIL    
Sbjct: 784  LPPGTVHLRLPRVFYVAKRLEIDYAPAMVGFEFRNGRSVPVFDGIVVCNEFKDAILEAYA 843

Query: 1778 XXXXXXXXXXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYN 1957
                            QA+SRWYQLLSSIITR+RLN  YG+G LPQ    +  + ++   
Sbjct: 844  EEEERRDAEEKKRNEAQAISRWYQLLSSIITRQRLNNSYGNGLLPQMPSNVENTNNQ--- 900

Query: 1958 SSATATATQKTEASPECQQVNIPEKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCH 2137
                  +TQ     P  Q+ +   KLNAPS   T++HEH F+++++  DE   TR KRCH
Sbjct: 901  PDVHVGSTQ----PPGHQKDSKDRKLNAPSMTLTDDHEHVFLVEDQSFDEQTSTRTKRCH 956

Query: 2138 CGFSIQFEEL 2167
            CGFS+Q EEL
Sbjct: 957  CGFSVQVEEL 966


>ref|XP_024037763.1| DNA repair protein RAD4 isoform X2 [Citrus clementina]
          Length = 954

 Score =  776 bits (2004), Expect = 0.0
 Identities = 418/731 (57%), Positives = 501/731 (68%), Gaps = 12/731 (1%)
 Frame = +2

Query: 11   KSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSVAD 190
            +S H ALA  LE+REG+PE +AALSVALFRAL LTTRFVSILDV SLKP+ADK+ SS  D
Sbjct: 232  RSFHSALAHALESREGTPEEIAALSVALFRALKLTTRFVSILDVASLKPEADKNVSSNQD 291

Query: 191  GCKNERDIFSSSTLMVAGPSCSSAYTVKP-SPYVEQDSSQTAIRGAGRQKADKSRKHELQ 367
              +    IF++ TLMVA P    A  VK  S   +++  +T+ +G    K    + +  Q
Sbjct: 292  SSRVGGGIFNAPTLMVAKPEEVLASPVKSFSCDKKENVCETSSKGLPECKYSSPKSNNTQ 351

Query: 368  SQDSLITDKPTDKMSEVSVSEVPTDTSEPC--LVKSEGLKRKGDLEFQMQLEMALSATAV 541
            S+ S ++ + + +  + S S   +D SE C    KS+ LKRKGDLEF+MQLEMALSAT V
Sbjct: 352  SKKSPVSCELSSRNLDPSSSMACSDISEACHPKEKSQALKRKGDLEFEMQLEMALSATNV 411

Query: 542  VNSHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEV 721
              S  ++ SD              KR+KKI   ES T   GISTA+GS+KVGAPLYWAEV
Sbjct: 412  ATSKSNICSDVKDLNSNSSTVLSVKRLKKIESGESSTSCLGISTAVGSRKVGAPLYWAEV 471

Query: 722  FCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKW 901
            +C GENLTGKWVHVDA NAIIDGE KVEAAAAACK SLRY+VAFAG GAKDVTRRYC KW
Sbjct: 472  YCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRYCMKW 531

Query: 902  YKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEASCQKKVEVSQVEPSMSNSCGAS 1081
            Y++A +R+NS WWDAVL PL+ELESGATGG+  +E     ++ V  S +  ++  S    
Sbjct: 532  YRIAPKRVNSAWWDAVLAPLRELESGATGGMTQME-----KRHVNASNILEALKTSNYPY 586

Query: 1082 MDSCEKKAT---------ESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLY 1234
             DS     +         ES  ++SF + R SLEDMELETRAL EPLPTNQQAY+NH LY
Sbjct: 587  RDSFPNHVSLYGDSDLNVESSAKDSFVADRNSLEDMELETRALTEPLPTNQQAYKNHQLY 646

Query: 1235 VIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLK 1414
            VIERWL KY+ILYPKGP+LGFCSGH+VYPR+CVQTL TKERWLRE LQVKA EVPVKV+K
Sbjct: 647  VIERWLNKYQILYPKGPILGFCSGHAVYPRSCVQTLKTKERWLREALQVKANEVPVKVIK 706

Query: 1415 RSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEK 1594
             S K  K +  +  DY EVD +G   LYGKWQ EPL LP AVNGIVP+NERGQVDVWSEK
Sbjct: 707  NSSKSKKGQDFEPEDYDEVDARGNIELYGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEK 766

Query: 1595 CLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXX 1774
            CLPPGT+HLRLPRV +VA+RL+ID APAMVGF+FRNGRS P+F+GIVVC EFKD IL   
Sbjct: 767  CLPPGTVHLRLPRVYSVAKRLEIDSAPAMVGFEFRNGRSTPVFDGIVVCAEFKDTILEAY 826

Query: 1775 XXXXXXXXXXXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCY 1954
                             QA SRWYQLLSSI+TR+RLN CYG+ +  QSS        K  
Sbjct: 827  AEEEEKREAEEKKRREAQATSRWYQLLSSIVTRQRLNNCYGNNSTSQSSSNF--QNVKKT 884

Query: 1955 NSSATATATQKTEASPECQQVNIPEKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRC 2134
            NS+    ++Q    SP  Q      KL+APS   +E HEH ++++++  DE      KRC
Sbjct: 885  NSNVGVDSSQNDWQSPN-QVDRGDTKLHAPSPFQSEEHEHVYLIEDQSFDEENSVTTKRC 943

Query: 2135 HCGFSIQFEEL 2167
            HCGF+IQ EEL
Sbjct: 944  HCGFTIQVEEL 954


>ref|XP_006430573.1| DNA repair protein RAD4 isoform X1 [Citrus clementina]
 gb|ESR43813.1| hypothetical protein CICLE_v10010990mg [Citrus clementina]
          Length = 974

 Score =  776 bits (2004), Expect = 0.0
 Identities = 418/731 (57%), Positives = 501/731 (68%), Gaps = 12/731 (1%)
 Frame = +2

Query: 11   KSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSVAD 190
            +S H ALA  LE+REG+PE +AALSVALFRAL LTTRFVSILDV SLKP+ADK+ SS  D
Sbjct: 252  RSFHSALAHALESREGTPEEIAALSVALFRALKLTTRFVSILDVASLKPEADKNVSSNQD 311

Query: 191  GCKNERDIFSSSTLMVAGPSCSSAYTVKP-SPYVEQDSSQTAIRGAGRQKADKSRKHELQ 367
              +    IF++ TLMVA P    A  VK  S   +++  +T+ +G    K    + +  Q
Sbjct: 312  SSRVGGGIFNAPTLMVAKPEEVLASPVKSFSCDKKENVCETSSKGLPECKYSSPKSNNTQ 371

Query: 368  SQDSLITDKPTDKMSEVSVSEVPTDTSEPC--LVKSEGLKRKGDLEFQMQLEMALSATAV 541
            S+ S ++ + + +  + S S   +D SE C    KS+ LKRKGDLEF+MQLEMALSAT V
Sbjct: 372  SKKSPVSCELSSRNLDPSSSMACSDISEACHPKEKSQALKRKGDLEFEMQLEMALSATNV 431

Query: 542  VNSHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEV 721
              S  ++ SD              KR+KKI   ES T   GISTA+GS+KVGAPLYWAEV
Sbjct: 432  ATSKSNICSDVKDLNSNSSTVLSVKRLKKIESGESSTSCLGISTAVGSRKVGAPLYWAEV 491

Query: 722  FCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKW 901
            +C GENLTGKWVHVDA NAIIDGE KVEAAAAACK SLRY+VAFAG GAKDVTRRYC KW
Sbjct: 492  YCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRYCMKW 551

Query: 902  YKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEASCQKKVEVSQVEPSMSNSCGAS 1081
            Y++A +R+NS WWDAVL PL+ELESGATGG+  +E     ++ V  S +  ++  S    
Sbjct: 552  YRIAPKRVNSAWWDAVLAPLRELESGATGGMTQME-----KRHVNASNILEALKTSNYPY 606

Query: 1082 MDSCEKKAT---------ESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLY 1234
             DS     +         ES  ++SF + R SLEDMELETRAL EPLPTNQQAY+NH LY
Sbjct: 607  RDSFPNHVSLYGDSDLNVESSAKDSFVADRNSLEDMELETRALTEPLPTNQQAYKNHQLY 666

Query: 1235 VIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLK 1414
            VIERWL KY+ILYPKGP+LGFCSGH+VYPR+CVQTL TKERWLRE LQVKA EVPVKV+K
Sbjct: 667  VIERWLNKYQILYPKGPILGFCSGHAVYPRSCVQTLKTKERWLREALQVKANEVPVKVIK 726

Query: 1415 RSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEK 1594
             S K  K +  +  DY EVD +G   LYGKWQ EPL LP AVNGIVP+NERGQVDVWSEK
Sbjct: 727  NSSKSKKGQDFEPEDYDEVDARGNIELYGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEK 786

Query: 1595 CLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXX 1774
            CLPPGT+HLRLPRV +VA+RL+ID APAMVGF+FRNGRS P+F+GIVVC EFKD IL   
Sbjct: 787  CLPPGTVHLRLPRVYSVAKRLEIDSAPAMVGFEFRNGRSTPVFDGIVVCAEFKDTILEAY 846

Query: 1775 XXXXXXXXXXXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCY 1954
                             QA SRWYQLLSSI+TR+RLN CYG+ +  QSS        K  
Sbjct: 847  AEEEEKREAEEKKRREAQATSRWYQLLSSIVTRQRLNNCYGNNSTSQSSSNF--QNVKKT 904

Query: 1955 NSSATATATQKTEASPECQQVNIPEKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRC 2134
            NS+    ++Q    SP  Q      KL+APS   +E HEH ++++++  DE      KRC
Sbjct: 905  NSNVGVDSSQNDWQSPN-QVDRGDTKLHAPSPFQSEEHEHVYLIEDQSFDEENSVTTKRC 963

Query: 2135 HCGFSIQFEEL 2167
            HCGF+IQ EEL
Sbjct: 964  HCGFTIQVEEL 974


>dbj|GAY43724.1| hypothetical protein CUMW_076680 [Citrus unshiu]
          Length = 974

 Score =  774 bits (1999), Expect = 0.0
 Identities = 418/728 (57%), Positives = 502/728 (68%), Gaps = 9/728 (1%)
 Frame = +2

Query: 11   KSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSVAD 190
            +S H ALA  LE+REG+PE +AALSVALFRAL LTTRFVSILDV SLKP+ADK+ SS  D
Sbjct: 252  RSFHSALAHALESREGTPEEIAALSVALFRALKLTTRFVSILDVASLKPEADKNVSSNQD 311

Query: 191  GCKNERDIFSSSTLMVAGPSCSSAYTVKP-SPYVEQDSSQTAIRGAGRQKADKSRKHELQ 367
              +    IF++ TLMVA P    A  VK  S   +++  +T+ +G+   K    + +  Q
Sbjct: 312  SSRVGGGIFNAPTLMVAKPEEVLASPVKSFSCDKKENVCETSSKGSPEYKYSSPKSNNTQ 371

Query: 368  SQDSLITDKPTDKMSEVSVSEVPTDTSEPC--LVKSEGLKRKGDLEFQMQLEMALSATAV 541
            S+ S ++ + + +  + S S   +D SE C    KS+ LKRKGDLEF+MQLEMALSAT V
Sbjct: 372  SKKSPVSRELSSRNLDPSSSMAYSDISEACHPKEKSQALKRKGDLEFEMQLEMALSATNV 431

Query: 542  VNSHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEV 721
              S  ++ SD              KR+KKI   ES T   GISTA+GS+KVGAPLYWAEV
Sbjct: 432  GTSKSNICSDVKDLNSNSSTVLPVKRLKKIESGESSTSCLGISTAVGSRKVGAPLYWAEV 491

Query: 722  FCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKW 901
            +C GENLTGKWVHVDA NAIIDGE KVEAAAAACK SLRY+VAFAG GAKDVTRRYC KW
Sbjct: 492  YCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRYCMKW 551

Query: 902  YKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECE-ASCQKKVEVSQVE-----PSMS 1063
            Y++A++R+NS WWDAVL PL+ELESGATGG+  +E    +    +E  +        S  
Sbjct: 552  YRIASKRVNSAWWDAVLAPLRELESGATGGMTQMEMRHVNASNTLEALKTSNYPYRDSFP 611

Query: 1064 NSCGASMDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIE 1243
            N    S DS      ES  ++SF + R SLEDMELETRAL EPLPTNQQAY+NH LYVIE
Sbjct: 612  NHVSLSGDS--DLNVESSAKDSFVADRNSLEDMELETRALTEPLPTNQQAYKNHQLYVIE 669

Query: 1244 RWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSM 1423
            RWL KY+ILYPKGP+LGFCSGH+VYPR+CVQTL TKERWLRE LQVKA EVPVKV+K S 
Sbjct: 670  RWLNKYQILYPKGPILGFCSGHAVYPRSCVQTLKTKERWLREALQVKATEVPVKVIKNSS 729

Query: 1424 KCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLP 1603
            K ++ +  +  DY EVD +G   LYGKWQ EPL LP AVNGIVP+NERGQVDVWSEKCLP
Sbjct: 730  KSNRGQDFEPEDYDEVDARGNIELYGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEKCLP 789

Query: 1604 PGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXX 1783
            PGT+HLRLPRV +VA+RL+ID APAMVGF+FRNGRS P+F+GIVVC EFKD IL      
Sbjct: 790  PGTVHLRLPRVYSVAKRLEIDSAPAMVGFEFRNGRSTPVFDGIVVCAEFKDTILEAYAEE 849

Query: 1784 XXXXXXXXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSS 1963
                          QA SRWYQLLSSI+TR+RLN CYG+ +  QSS        K  NS+
Sbjct: 850  EEKREAEEKKRREAQATSRWYQLLSSIVTRQRLNNCYGNNSTSQSSSNF--QNVKKTNSN 907

Query: 1964 ATATATQKTEASPECQQVNIPEKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCG 2143
                ++Q    SP  Q      KL+APS   +E HEH ++++++  DE      KRCHCG
Sbjct: 908  VGVDSSQNDWQSPN-QIDKGDTKLHAPSPAQSEEHEHVYLIEDQSFDEENSVTTKRCHCG 966

Query: 2144 FSIQFEEL 2167
            F+IQ EEL
Sbjct: 967  FTIQVEEL 974


>ref|XP_006482097.1| PREDICTED: DNA repair protein RAD4 isoform X2 [Citrus sinensis]
          Length = 954

 Score =  773 bits (1995), Expect = 0.0
 Identities = 417/728 (57%), Positives = 502/728 (68%), Gaps = 9/728 (1%)
 Frame = +2

Query: 11   KSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSVAD 190
            +S H ALA  LE+REG+PE +AALSVALFRAL LTTRFVSILDV SLKP+ADK+ SS  D
Sbjct: 232  RSFHSALAHALESREGTPEEIAALSVALFRALKLTTRFVSILDVASLKPEADKNVSSNQD 291

Query: 191  GCKNERDIFSSSTLMVAGPSCSSAYTVKP-SPYVEQDSSQTAIRGAGRQKADKSRKHELQ 367
              +    IF++ TLMVA P    A  VK  S   +++  +T+ +G+   K    + +  Q
Sbjct: 292  SSRVGGGIFNAPTLMVAKPEEVLASPVKSFSCDKKENVCETSSKGSPEYKYSSPKSNNTQ 351

Query: 368  SQDSLITDKPTDKMSEVSVSEVPTDTSEPC--LVKSEGLKRKGDLEFQMQLEMALSATAV 541
            S+ S ++ + + +  + S S   +D SE C    KS+ LKRKGDLEF+MQLEMALSAT V
Sbjct: 352  SKKSPVSRELSSRNLDPSSSMACSDISEACHPKEKSQALKRKGDLEFEMQLEMALSATNV 411

Query: 542  VNSHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEV 721
              S  ++ SD              KR+KKI   ES T   GISTA+GS+KVGAPLYWAEV
Sbjct: 412  GTSKSNICSDVKDLNSNSSTVLPVKRLKKIESGESSTSCLGISTAVGSRKVGAPLYWAEV 471

Query: 722  FCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKW 901
            +C GENLTGKWVHVDA NAIIDGE KVEAAAAACK SLRY+VAFAG GAKDVTRRYC KW
Sbjct: 472  YCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRYCMKW 531

Query: 902  YKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECE-ASCQKKVEVSQVE-----PSMS 1063
            Y++A++R+NS WWDAVL PL+ELESGATGG+  +E    +    +E  +        S  
Sbjct: 532  YRIASKRVNSAWWDAVLAPLRELESGATGGMTQMEMRHVNASNTLEALKTSNYPYRDSFP 591

Query: 1064 NSCGASMDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIE 1243
            N    S DS      ES  ++SF + R SLEDMELETRAL EPLPTNQQAY+NH LYVIE
Sbjct: 592  NHVSLSGDS--DLNVESSAKDSFVADRNSLEDMELETRALTEPLPTNQQAYKNHQLYVIE 649

Query: 1244 RWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSM 1423
            RWL KY+ILYPKGP+LGFCSGH+VYPR+CVQTL TKERWL+E LQVKA EVPVKV+K S 
Sbjct: 650  RWLNKYQILYPKGPILGFCSGHAVYPRSCVQTLKTKERWLQEALQVKATEVPVKVIKNSS 709

Query: 1424 KCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLP 1603
            K ++ +  +  DY EVD +G   LYGKWQ EPL LP AVNGIVP+NERGQVDVWSEKCLP
Sbjct: 710  KSNRGQDFEPEDYDEVDARGNIELYGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEKCLP 769

Query: 1604 PGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXX 1783
            PGT+HLRLPRV +VA+RL+ID APAMVGF+FRNGRS P+F+GIVVC EFKD IL      
Sbjct: 770  PGTVHLRLPRVYSVAKRLEIDSAPAMVGFEFRNGRSTPVFDGIVVCVEFKDTILEAYAEE 829

Query: 1784 XXXXXXXXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSS 1963
                          QA SRWYQLLSSI+TR+RLN CYG+ +  QSS        K  NS+
Sbjct: 830  EEKREAEEKKRREAQATSRWYQLLSSIVTRQRLNNCYGNNSTSQSSSNF--QNVKKTNSN 887

Query: 1964 ATATATQKTEASPECQQVNIPEKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCG 2143
                ++Q    SP  Q      KL+APS   +E HEH ++++++  DE      KRCHCG
Sbjct: 888  VGVDSSQNDWQSPN-QIDKGDTKLHAPSPAQSEEHEHVYLIEDQSFDEENSVTTKRCHCG 946

Query: 2144 FSIQFEEL 2167
            F+IQ EEL
Sbjct: 947  FTIQVEEL 954


>ref|XP_006482096.1| PREDICTED: DNA repair protein RAD4 isoform X1 [Citrus sinensis]
          Length = 974

 Score =  773 bits (1995), Expect = 0.0
 Identities = 417/728 (57%), Positives = 502/728 (68%), Gaps = 9/728 (1%)
 Frame = +2

Query: 11   KSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSVAD 190
            +S H ALA  LE+REG+PE +AALSVALFRAL LTTRFVSILDV SLKP+ADK+ SS  D
Sbjct: 252  RSFHSALAHALESREGTPEEIAALSVALFRALKLTTRFVSILDVASLKPEADKNVSSNQD 311

Query: 191  GCKNERDIFSSSTLMVAGPSCSSAYTVKP-SPYVEQDSSQTAIRGAGRQKADKSRKHELQ 367
              +    IF++ TLMVA P    A  VK  S   +++  +T+ +G+   K    + +  Q
Sbjct: 312  SSRVGGGIFNAPTLMVAKPEEVLASPVKSFSCDKKENVCETSSKGSPEYKYSSPKSNNTQ 371

Query: 368  SQDSLITDKPTDKMSEVSVSEVPTDTSEPC--LVKSEGLKRKGDLEFQMQLEMALSATAV 541
            S+ S ++ + + +  + S S   +D SE C    KS+ LKRKGDLEF+MQLEMALSAT V
Sbjct: 372  SKKSPVSRELSSRNLDPSSSMACSDISEACHPKEKSQALKRKGDLEFEMQLEMALSATNV 431

Query: 542  VNSHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEV 721
              S  ++ SD              KR+KKI   ES T   GISTA+GS+KVGAPLYWAEV
Sbjct: 432  GTSKSNICSDVKDLNSNSSTVLPVKRLKKIESGESSTSCLGISTAVGSRKVGAPLYWAEV 491

Query: 722  FCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKW 901
            +C GENLTGKWVHVDA NAIIDGE KVEAAAAACK SLRY+VAFAG GAKDVTRRYC KW
Sbjct: 492  YCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRYCMKW 551

Query: 902  YKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECE-ASCQKKVEVSQVE-----PSMS 1063
            Y++A++R+NS WWDAVL PL+ELESGATGG+  +E    +    +E  +        S  
Sbjct: 552  YRIASKRVNSAWWDAVLAPLRELESGATGGMTQMEMRHVNASNTLEALKTSNYPYRDSFP 611

Query: 1064 NSCGASMDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIE 1243
            N    S DS      ES  ++SF + R SLEDMELETRAL EPLPTNQQAY+NH LYVIE
Sbjct: 612  NHVSLSGDS--DLNVESSAKDSFVADRNSLEDMELETRALTEPLPTNQQAYKNHQLYVIE 669

Query: 1244 RWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSM 1423
            RWL KY+ILYPKGP+LGFCSGH+VYPR+CVQTL TKERWL+E LQVKA EVPVKV+K S 
Sbjct: 670  RWLNKYQILYPKGPILGFCSGHAVYPRSCVQTLKTKERWLQEALQVKATEVPVKVIKNSS 729

Query: 1424 KCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLP 1603
            K ++ +  +  DY EVD +G   LYGKWQ EPL LP AVNGIVP+NERGQVDVWSEKCLP
Sbjct: 730  KSNRGQDFEPEDYDEVDARGNIELYGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEKCLP 789

Query: 1604 PGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXX 1783
            PGT+HLRLPRV +VA+RL+ID APAMVGF+FRNGRS P+F+GIVVC EFKD IL      
Sbjct: 790  PGTVHLRLPRVYSVAKRLEIDSAPAMVGFEFRNGRSTPVFDGIVVCVEFKDTILEAYAEE 849

Query: 1784 XXXXXXXXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSS 1963
                          QA SRWYQLLSSI+TR+RLN CYG+ +  QSS        K  NS+
Sbjct: 850  EEKREAEEKKRREAQATSRWYQLLSSIVTRQRLNNCYGNNSTSQSSSNF--QNVKKTNSN 907

Query: 1964 ATATATQKTEASPECQQVNIPEKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCG 2143
                ++Q    SP  Q      KL+APS   +E HEH ++++++  DE      KRCHCG
Sbjct: 908  VGVDSSQNDWQSPN-QIDKGDTKLHAPSPAQSEEHEHVYLIEDQSFDEENSVTTKRCHCG 966

Query: 2144 FSIQFEEL 2167
            F+IQ EEL
Sbjct: 967  FTIQVEEL 974


>ref|XP_016457355.1| PREDICTED: DNA repair protein RAD4-like [Nicotiana tabacum]
          Length = 907

 Score =  769 bits (1986), Expect = 0.0
 Identities = 420/722 (58%), Positives = 494/722 (68%), Gaps = 2/722 (0%)
 Frame = +2

Query: 8    EKSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSVA 187
            EKS H ALASTLE++EG+ E VAALSVALFRALNLTTRFVSILDV SLKP+ +K   S  
Sbjct: 240  EKSFHSALASTLESQEGTSEEVAALSVALFRALNLTTRFVSILDVASLKPEIEKLYPSGQ 299

Query: 188  DGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQ 367
               K    IF+SSTLMVA P  S     K                 G+    KSR     
Sbjct: 300  SPSKAGSGIFNSSTLMVAAPKYSPLSPAKSL-------------ADGKHNNGKSR----- 341

Query: 368  SQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGLKRKGDLEFQMQLEMALSATAVVN 547
               + ITDK +DK    S S+   D ++ C++KSE  KRKGDLEF+MQLEMALS+TAV  
Sbjct: 342  ---ATITDK-SDKRMSPSTSDAQRDANDECIMKSERPKRKGDLEFEMQLEMALSSTAVEI 397

Query: 548  SHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFC 727
               +M S+              K+ KKI+ EE  T S+GISTA+GS+KVGAPLYWAEV+C
Sbjct: 398  VRNTMVSELADVQSTSSNVSPFKK-KKIKAEECSTSSHGISTAVGSRKVGAPLYWAEVYC 456

Query: 728  GGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYK 907
             GENLTGKWVHVD VNAI DGE  VEAAAAACK  LRYVVAFAG+GAKDVTRRYCTKWYK
Sbjct: 457  SGENLTGKWVHVDVVNAITDGEQNVEAAAAACKLHLRYVVAFAGNGAKDVTRRYCTKWYK 516

Query: 908  VAAQRINSTWWDAVLEPLKELESGATGGVVSVECEASCQ-KKVEVSQVEPSMSNSCGASM 1084
            +A++R+NS WWDAVL PLKELES AT  VV +  E S + KK EV+Q             
Sbjct: 517  IASERVNSIWWDAVLAPLKELESVATSDVVHLRRETSDESKKREVAQS------------ 564

Query: 1085 DSCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYE 1264
                             +TR SLEDMELETRAL EPLPTNQQAYRNH LY+IERWL KY+
Sbjct: 565  ----------------TATRSSLEDMELETRALTEPLPTNQQAYRNHRLYIIERWLNKYQ 608

Query: 1265 ILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEA 1444
            ILYPKGPVLGFCSGH VYPR+CVQTL  KE+W REGLQVKA E+P KVLK S K +KE+ 
Sbjct: 609  ILYPKGPVLGFCSGHPVYPRSCVQTLKRKEKWFREGLQVKANEIPAKVLKHSGKQNKEQD 668

Query: 1445 GDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLR 1624
              D+DY E D  G  +LYG+WQTEPL LP AVNGIVPKN RGQVDVWSEKCLPPGT+HLR
Sbjct: 669  VKDDDYGEEDCGGTVALYGQWQTEPLFLPPAVNGIVPKNGRGQVDVWSEKCLPPGTVHLR 728

Query: 1625 LPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXX 1804
            LPR+  VA+RL+IDFAPAMVGF+FRNGRS+P++EGIVVCTEFKDAIL             
Sbjct: 729  LPRLVPVAKRLEIDFAPAMVGFEFRNGRSLPVYEGIVVCTEFKDAILETYAEEEERRQAK 788

Query: 1805 XXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQ 1984
                   +ALSRWYQLL+S+ITR+RL+ CY DGA  QS++    S DK   SS  A   +
Sbjct: 789  ERKRSEAEALSRWYQLLASLITRQRLHNCYVDGASSQSAVNFATSNDK---SSLLARDAE 845

Query: 1985 KTEASPECQQVNIP-EKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFE 2161
             T+ +PE QQ      + ++P ++  E+H H F+++++ VDE   TR KRC CGFS+Q+E
Sbjct: 846  DTKKTPEYQQEKSEIAQSDSPPTVLAEDHAHVFVVEDQTVDEESSTRTKRCRCGFSVQYE 905

Query: 2162 EL 2167
            EL
Sbjct: 906  EL 907


>gb|EOY03915.1| DNA repair protein xp-C / rad4, putative isoform 2 [Theobroma cacao]
          Length = 908

 Score =  768 bits (1984), Expect = 0.0
 Identities = 415/746 (55%), Positives = 508/746 (68%), Gaps = 25/746 (3%)
 Frame = +2

Query: 5    AEKSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSV 184
            AE+S H ALA  LETREG+PE +AALSVALFRAL  T RFVSILDV SLKP+ADK E S 
Sbjct: 166  AERSFHTALAFALETREGTPEEIAALSVALFRALKFTARFVSILDVASLKPEADKCEPSS 225

Query: 185  ADGCKNERDIFSSSTLMVAGPS--CSSAYTVKPSPYVEQDSS-QTAIRGAGRQKADKSRK 355
             +  +    IFS+STLMVA P    SS+Y VK     E+D   + ++R + + K      
Sbjct: 226  QEANRVGGGIFSTSTLMVANPKEVSSSSYPVKSFSCSEKDGHCENSLRSSCKSKGGCPTS 285

Query: 356  HELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCL-VKSEGLKRKGDLEFQMQLEMALSA 532
            ++ QS+ S   D+ TD+ S +   +   DT   C   KS+GLKRKGDLEF+MQL MA+SA
Sbjct: 286  NDTQSRYSTAVDEVTDRTSNLFACQAQLDTYGQCAPTKSQGLKRKGDLEFEMQLAMAISA 345

Query: 533  TAV---VNSHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAP 703
            T V    NS  S+                 KR KKI + ES T S G+STA+GS+KVG+P
Sbjct: 346  TTVGTLENSAGSLDVSNFNGNNSLDASTPSKRWKKIHRVESATSSQGLSTALGSRKVGSP 405

Query: 704  LYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTR 883
            L+WAEV+CGGENLTGKWVHVDA+NAIIDGE KVE AAAACK +LRYVVAFAG GAKDVTR
Sbjct: 406  LFWAEVYCGGENLTGKWVHVDALNAIIDGEQKVEDAAAACKTALRYVVAFAGRGAKDVTR 465

Query: 884  RYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVEC----EASCQKKVEVSQVE 1051
            RYC KWYK+A +R+NS WWDAVL PL+ELESGATGG +++E      ++ Q+K++ S + 
Sbjct: 466  RYCMKWYKIAPKRVNSIWWDAVLAPLRELESGATGGTINMEKLHNNASNEQEKIKASGMS 525

Query: 1052 P-----SMSNSC--------GASMDSCEKKATESFMRNSFASTRGSLEDMELETRALIEP 1192
                  S SN           A  +   K   ES  ++S  +TR SLEDMELETRAL EP
Sbjct: 526  EYPGTDSPSNHVILPEKSGQEAFKEYGSKSEVESSTKHSLVATRNSLEDMELETRALTEP 585

Query: 1193 LPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREG 1372
            LPTNQQAY+NH LY +ERWL K +IL+P+GP+LG+CSGH VYPRTCVQTL  +ERWLREG
Sbjct: 586  LPTNQQAYKNHALYALERWLTKCQILHPRGPILGYCSGHPVYPRTCVQTLKPRERWLREG 645

Query: 1373 LQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIV 1552
            LQVK  E+P KVLKRS K  K +  +++DY E+D +G   LYGKWQ EPLCLP AV+GIV
Sbjct: 646  LQVKGNEIPAKVLKRSAKLKKVQVSEEDDYEEIDSKGTIELYGKWQLEPLCLPHAVDGIV 705

Query: 1553 PKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGI 1732
            PKNERGQVDVWSEKCLPPGT+HLRLPRV +VA+RL+ID+APAMVGF+FRNGR+ P+F+GI
Sbjct: 706  PKNERGQVDVWSEKCLPPGTVHLRLPRVFSVAKRLEIDYAPAMVGFEFRNGRAAPIFDGI 765

Query: 1733 VVCTEFKDAILXXXXXXXXXXXXXXXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALP 1912
            VVC+EFKDAIL                    QA+SRWYQLLSSIITR++L   YGDG+  
Sbjct: 766  VVCSEFKDAILEAYAEEEERRVAEEKKRNEAQAISRWYQLLSSIITRQKLKSYYGDGSSS 825

Query: 1913 QSSIEIPKSGDKCYNSSATATATQKTEASPECQQVNIPEKL-NAPSSMPTENHEHEFILD 2089
            Q+S  I    DK    +A   +++    S    + +  + L N PS    E+HEH F+ +
Sbjct: 826  QASRNIQ---DKNNEINAPDESSKDDRQSTGLWKGDGEDTLCNIPSGTLVEDHEHVFLRE 882

Query: 2090 EKKVDEGGLTRIKRCHCGFSIQFEEL 2167
             +  D     R KRCHCGFSIQ EEL
Sbjct: 883  NESFDAENSVRTKRCHCGFSIQVEEL 908


>ref|XP_009789278.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            [Nicotiana sylvestris]
          Length = 932

 Score =  769 bits (1986), Expect = 0.0
 Identities = 420/722 (58%), Positives = 494/722 (68%), Gaps = 2/722 (0%)
 Frame = +2

Query: 8    EKSCHFALASTLETREGSPEAVAALSVALFRALNLTTRFVSILDVISLKPDADKSESSVA 187
            EKS H ALASTLE++EG+ E VAALSVALFRALNLTTRFVSILDV SLKP+ +K   S  
Sbjct: 265  EKSFHSALASTLESQEGTSEEVAALSVALFRALNLTTRFVSILDVASLKPEIEKLYPSGQ 324

Query: 188  DGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQ 367
               K    IF+SSTLMVA P  S     K                 G+    KSR     
Sbjct: 325  SPSKAGSGIFNSSTLMVAAPKYSPLSPAKSL-------------ADGKHNNGKSR----- 366

Query: 368  SQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGLKRKGDLEFQMQLEMALSATAVVN 547
               + ITDK +DK    S S+   D ++ C++KSE  KRKGDLEF+MQLEMALS+TAV  
Sbjct: 367  ---ATITDK-SDKRMSPSTSDAQRDANDECIMKSERPKRKGDLEFEMQLEMALSSTAVEI 422

Query: 548  SHVSMASDAXXXXXXXXXXXXXKRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFC 727
               +M S+              K+ KKI+ EE  T S+GISTA+GS+KVGAPLYWAEV+C
Sbjct: 423  VRNTMVSELADVQSTSSNVSPFKK-KKIKAEECSTSSHGISTAVGSRKVGAPLYWAEVYC 481

Query: 728  GGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYK 907
             GENLTGKWVHVD VNAI DGE  VEAAAAACK  LRYVVAFAG+GAKDVTRRYCTKWYK
Sbjct: 482  SGENLTGKWVHVDVVNAITDGEQNVEAAAAACKLHLRYVVAFAGNGAKDVTRRYCTKWYK 541

Query: 908  VAAQRINSTWWDAVLEPLKELESGATGGVVSVECEASCQ-KKVEVSQVEPSMSNSCGASM 1084
            +A++R+NS WWDAVL PLKELES AT  VV +  E S + KK EV+Q             
Sbjct: 542  IASERVNSIWWDAVLAPLKELESVATSDVVHLRRETSDESKKREVAQS------------ 589

Query: 1085 DSCEKKATESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYE 1264
                             +TR SLEDMELETRAL EPLPTNQQAYRNH LY+IERWL KY+
Sbjct: 590  ----------------TATRSSLEDMELETRALTEPLPTNQQAYRNHRLYIIERWLNKYQ 633

Query: 1265 ILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEA 1444
            ILYPKGPVLGFCSGH VYPR+CVQTL  KE+W REGLQVKA E+P KVLK S K +KE+ 
Sbjct: 634  ILYPKGPVLGFCSGHPVYPRSCVQTLKRKEKWFREGLQVKANEIPAKVLKHSGKQNKEQD 693

Query: 1445 GDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLR 1624
              D+DY E D  G  +LYG+WQTEPL LP AVNGIVPKN RGQVDVWSEKCLPPGT+HLR
Sbjct: 694  VKDDDYGEEDCGGTVALYGQWQTEPLFLPPAVNGIVPKNGRGQVDVWSEKCLPPGTVHLR 753

Query: 1625 LPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXX 1804
            LPR+  VA+RL+IDFAPAMVGF+FRNGRS+P++EGIVVCTEFKDAIL             
Sbjct: 754  LPRLVPVAKRLEIDFAPAMVGFEFRNGRSLPVYEGIVVCTEFKDAILETYAEEEERRQAK 813

Query: 1805 XXXXXXXQALSRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNSSATATATQ 1984
                   +ALSRWYQLL+S+ITR+RL+ CY DGA  QS++    S DK   SS  A   +
Sbjct: 814  ERKRSEAEALSRWYQLLASLITRQRLHNCYVDGASSQSAVNFATSNDK---SSLLARDAE 870

Query: 1985 KTEASPECQQVNIP-EKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFE 2161
             T+ +PE QQ      + ++P ++  E+H H F+++++ VDE   TR KRC CGFS+Q+E
Sbjct: 871  DTKKTPEYQQEKSEIAQSDSPPTVLAEDHAHVFVVEDQTVDEESSTRTKRCRCGFSVQYE 930

Query: 2162 EL 2167
            EL
Sbjct: 931  EL 932