BLASTX nr result

ID: Rehmannia31_contig00008304 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00008304
         (407 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011072081.1| RAP domain-containing protein, chloroplastic...    82   1e-15

>ref|XP_011072081.1| RAP domain-containing protein, chloroplastic [Sesamum indicum]
          Length = 678

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 39/61 (63%), Positives = 47/61 (77%)
 Frame = -2

Query: 253 MEASGFINSVATFHVPSTKAIIAFKTLLPIVNPKVHLRSLFQKHSCINPGNSYRRSGNLV 74
           MEASG INSVATFH+PS KA   FKT LP+V P++HL SL +KH CIN G +Y R+ N+V
Sbjct: 1   MEASGLINSVATFHIPSAKAA-TFKTSLPVVGPRIHLNSLSRKHCCINSGKNYSRNDNIV 59

Query: 73  A 71
           A
Sbjct: 60  A 60


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