BLASTX nr result
ID: Rehmannia31_contig00008199
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00008199
(766 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIN25012.1| hypothetical protein CDL12_02248 [Handroanthus im... 134 6e-52
gb|PIM98792.1| hypothetical protein CDL12_28721 [Handroanthus im... 133 1e-49
ref|XP_022888230.1| probable mediator of RNA polymerase II trans... 134 1e-42
ref|XP_022888231.1| probable mediator of RNA polymerase II trans... 128 1e-40
ref|XP_011075463.1| probable mediator of RNA polymerase II trans... 145 7e-37
ref|XP_009613484.1| PREDICTED: probable mediator of RNA polymera... 122 1e-34
gb|EYU18603.1| hypothetical protein MIMGU_mgv1a006753mg [Erythra... 137 3e-34
ref|XP_012828170.1| PREDICTED: probable mediator of RNA polymera... 137 4e-34
emb|CDP19596.1| unnamed protein product [Coffea canephora] 118 1e-33
ref|XP_009790095.1| PREDICTED: probable mediator of RNA polymera... 121 1e-33
ref|XP_022852371.1| probable mediator of RNA polymerase II trans... 136 1e-33
ref|XP_011079079.1| probable mediator of RNA polymerase II trans... 135 3e-33
ref|XP_015088875.1| PREDICTED: probable mediator of RNA polymera... 119 3e-33
ref|XP_006339256.1| PREDICTED: probable mediator of RNA polymera... 119 3e-32
ref|XP_018810566.1| PREDICTED: probable mediator of RNA polymera... 123 3e-31
ref|XP_018810567.1| PREDICTED: probable mediator of RNA polymera... 123 3e-31
ref|XP_018853209.1| PREDICTED: probable mediator of RNA polymera... 125 4e-31
ref|XP_018853210.1| PREDICTED: probable mediator of RNA polymera... 125 4e-31
dbj|GAY43676.1| hypothetical protein CUMW_076320 [Citrus unshiu] 120 4e-31
ref|XP_023925776.1| probable mediator of RNA polymerase II trans... 125 5e-31
>gb|PIN25012.1| hypothetical protein CDL12_02248 [Handroanthus impetiginosus]
Length = 469
Score = 134 bits (337), Expect(2) = 6e-52
Identities = 71/90 (78%), Positives = 75/90 (83%)
Frame = -2
Query: 477 EQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQERYQEAENAKRQRTIQVVE 298
EQKSDK TIQKK +P Q EK NN+ SVRM LEAAKRKLQERYQEAENAK+QRTIQVVE
Sbjct: 381 EQKSDKSTIQKKQMPPQVEKSRGNNDGSVRMNLEAAKRKLQERYQEAENAKKQRTIQVVE 440
Query: 297 LHDLPKQSLAQRNQQTRPGNQHRQRANGRR 208
LHDLPKQSLA RNQ RPGN +R ANGRR
Sbjct: 441 LHDLPKQSLA-RNQHMRPGNHNRNWANGRR 469
Score = 99.4 bits (246), Expect(2) = 6e-52
Identities = 53/93 (56%), Positives = 59/93 (63%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRP 587
NKNRE+GRK EK D E PDDS AP K E +RN E L+KQAPP KPNRP
Sbjct: 286 NKNRESGRKPSFEKKDTRNWKVESPDDSRAPPKG-KKIEQRRNLEPTLKKQAPPPKPNRP 344
Query: 586 PKIESGPLKPKPPSDESGTRRPKPVVQLKAKNE 488
ESGP +PKP S ESG RPKP ++ KA NE
Sbjct: 345 SGGESGPGRPKPLSSESGPGRPKPAIKPKANNE 377
>gb|PIM98792.1| hypothetical protein CDL12_28721 [Handroanthus impetiginosus]
Length = 422
Score = 133 bits (335), Expect(2) = 1e-49
Identities = 71/90 (78%), Positives = 75/90 (83%)
Frame = -2
Query: 477 EQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQERYQEAENAKRQRTIQVVE 298
EQKSDK TIQKK +P Q EK NN+ SVRM LEAAKRKLQERYQEAENAK+QRTIQVVE
Sbjct: 334 EQKSDKSTIQKKLMPPQVEKSRGNNDGSVRMNLEAAKRKLQERYQEAENAKKQRTIQVVE 393
Query: 297 LHDLPKQSLAQRNQQTRPGNQHRQRANGRR 208
LHDLPKQSLA RNQ RPGN +R ANGRR
Sbjct: 394 LHDLPKQSLA-RNQHMRPGNHNRNWANGRR 422
Score = 92.0 bits (227), Expect(2) = 1e-49
Identities = 50/92 (54%), Positives = 56/92 (60%)
Frame = -1
Query: 763 KNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRPP 584
KNRE+GRK EK D E P DS AP K E +RN E L+KQ PP KPNRP
Sbjct: 240 KNRESGRKPSFEKKDTRNWKVESPVDSRAPPKG-KKIEQRRNLEPTLKKQVPPPKPNRPS 298
Query: 583 KIESGPLKPKPPSDESGTRRPKPVVQLKAKNE 488
ESGP +PKP S ESG RPKP ++ KA NE
Sbjct: 299 GGESGPGRPKPLSSESGPGRPKPAIKPKANNE 330
>ref|XP_022888230.1| probable mediator of RNA polymerase II transcription subunit 26b
isoform X1 [Olea europaea var. sylvestris]
Length = 485
Score = 134 bits (338), Expect(2) = 1e-42
Identities = 68/98 (69%), Positives = 79/98 (80%)
Frame = -2
Query: 501 RLKTRLLAEQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQERYQEAENAKR 322
++K +QK KG IQKKP P QQ+KL NNEAS+++KLEAAKRKL ERYQEA+NAK+
Sbjct: 388 KVKNDTKDQQKPVKGMIQKKPTPPQQDKLRGNNEASMQVKLEAAKRKLHERYQEAKNAKK 447
Query: 321 QRTIQVVELHDLPKQSLAQRNQQTRPGNQHRQRANGRR 208
QRT+QVVE DLPKQSLAQ NQ RPGN +RQRANGRR
Sbjct: 448 QRTVQVVEFCDLPKQSLAQSNQNMRPGNHNRQRANGRR 485
Score = 67.8 bits (164), Expect(2) = 1e-42
Identities = 37/93 (39%), Positives = 52/93 (55%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRP 587
NKN E+ RK EK+ +P+ + PDDS D+K E KR+ E++++KQ P KPN
Sbjct: 313 NKNHESSRKVTLEKSSIPKWKDQAPDDS-CTRPKDTKVEQKRDLEAVVKKQTPVRKPN-- 369
Query: 586 PKIESGPLKPKPPSDESGTRRPKPVVQLKAKNE 488
KPPS +G R P+P +Q K KN+
Sbjct: 370 ----------KPPSSGTGPRMPRPTLQNKVKND 392
>ref|XP_022888231.1| probable mediator of RNA polymerase II transcription subunit 26b
isoform X2 [Olea europaea var. sylvestris]
Length = 484
Score = 128 bits (321), Expect(2) = 1e-40
Identities = 67/98 (68%), Positives = 78/98 (79%)
Frame = -2
Query: 501 RLKTRLLAEQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQERYQEAENAKR 322
++K +QK KG IQKKP P QQ+ L NNEAS+++KLEAAKRKL ERYQEA+NAK+
Sbjct: 388 KVKNDTKDQQKPVKGMIQKKPTPPQQD-LRGNNEASMQVKLEAAKRKLHERYQEAKNAKK 446
Query: 321 QRTIQVVELHDLPKQSLAQRNQQTRPGNQHRQRANGRR 208
QRT+QVVE DLPKQSLAQ NQ RPGN +RQRANGRR
Sbjct: 447 QRTVQVVEFCDLPKQSLAQSNQNMRPGNHNRQRANGRR 484
Score = 67.8 bits (164), Expect(2) = 1e-40
Identities = 37/93 (39%), Positives = 52/93 (55%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRP 587
NKN E+ RK EK+ +P+ + PDDS D+K E KR+ E++++KQ P KPN
Sbjct: 313 NKNHESSRKVTLEKSSIPKWKDQAPDDS-CTRPKDTKVEQKRDLEAVVKKQTPVRKPN-- 369
Query: 586 PKIESGPLKPKPPSDESGTRRPKPVVQLKAKNE 488
KPPS +G R P+P +Q K KN+
Sbjct: 370 ----------KPPSSGTGPRMPRPTLQNKVKND 392
>ref|XP_011075463.1| probable mediator of RNA polymerase II transcription subunit 26b
[Sesamum indicum]
Length = 471
Score = 145 bits (365), Expect = 7e-37
Identities = 77/108 (71%), Positives = 84/108 (77%)
Frame = -2
Query: 531 PGDQNQSCN*RLKTRLLAEQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQE 352
PG + + + +QKSD GTIQKKP+P QQEK N NNEASVRMKLEAAKRKLQE
Sbjct: 365 PGRPRPAVRPKPNNEIKVQQKSDTGTIQKKPMP-QQEKSNGNNEASVRMKLEAAKRKLQE 423
Query: 351 RYQEAENAKRQRTIQVVELHDLPKQSLAQRNQQTRPGNQHRQRANGRR 208
RYQEAENAK+QRTIQVVEL DLPKQSL QRNQ RPGN +R ANGRR
Sbjct: 424 RYQEAENAKKQRTIQVVELRDLPKQSLVQRNQHMRPGNYNRNWANGRR 471
Score = 106 bits (265), Expect = 9e-23
Identities = 54/94 (57%), Positives = 63/94 (67%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRP 587
NKNRE+GRK EK + E PDDS L + +AE RN E +LRKQAPPSKPNRP
Sbjct: 287 NKNRESGRKLNLEKINNRNWKVESPDDSRPLLPKEKRAEQMRNVEPILRKQAPPSKPNRP 346
Query: 586 PKIESGPLKPKPPSDESGTRRPKPVVQLKAKNEI 485
P ESGP +P+PPS ESG RP+P V+ K NEI
Sbjct: 347 PGGESGPGRPRPPSSESGPGRPRPAVRPKPNNEI 380
>ref|XP_009613484.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Nicotiana tomentosiformis]
ref|XP_016512360.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Nicotiana tabacum]
Length = 461
Score = 122 bits (306), Expect(2) = 1e-34
Identities = 61/95 (64%), Positives = 75/95 (78%), Gaps = 5/95 (5%)
Frame = -2
Query: 477 EQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQERYQEAENAKRQRTIQVVE 298
+QKSDKGT+QK+PVP Q KL ++E +V++KLEA KRKLQERYQEAENAKRQRTIQV+E
Sbjct: 367 QQKSDKGTVQKRPVPSQLNKLRHSDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVME 426
Query: 297 LHDLPKQSLAQ-----RNQQTRPGNQHRQRANGRR 208
LHD+PKQ ++ +N RPGN +R ANGRR
Sbjct: 427 LHDIPKQGISNQGLGLKNPHMRPGNNNRHWANGRR 461
Score = 53.1 bits (126), Expect(2) = 1e-34
Identities = 30/90 (33%), Positives = 49/90 (54%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRP 587
N+NR NGRK + + P R + D +A +SK E ++ QE++++KQ P +PN+P
Sbjct: 282 NENRGNGRKLSLDNQNNPVRKKQSADFFDAA-PKESKGEQQKKQEAVIKKQTPVMRPNKP 340
Query: 586 PKIESGPLKPKPPSDESGTRRPKPVVQLKA 497
+SGP +P P E + + Q K+
Sbjct: 341 SGGDSGPGRPIKPVSEQKLKMSEMNFQQKS 370
>gb|EYU18603.1| hypothetical protein MIMGU_mgv1a006753mg [Erythranthe guttata]
Length = 433
Score = 137 bits (345), Expect = 3e-34
Identities = 71/108 (65%), Positives = 81/108 (75%)
Frame = -2
Query: 531 PGDQNQSCN*RLKTRLLAEQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQE 352
P ++S R K + Q ++ G IQ+KP+P QQEKLN NNE SVRMKLEAAKRKLQE
Sbjct: 326 PPPSSESGPGRPKPAAIKPQANNNGAIQRKPMPTQQEKLNSNNEPSVRMKLEAAKRKLQE 385
Query: 351 RYQEAENAKRQRTIQVVELHDLPKQSLAQRNQQTRPGNQHRQRANGRR 208
RYQEAENAK+QRTIQVVEL DLPKQ+ QRNQ RP NQ+R R N RR
Sbjct: 386 RYQEAENAKKQRTIQVVELRDLPKQNFGQRNQHMRPANQNRNRPNVRR 433
>ref|XP_012828170.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Erythranthe guttata]
Length = 455
Score = 137 bits (345), Expect = 4e-34
Identities = 71/108 (65%), Positives = 81/108 (75%)
Frame = -2
Query: 531 PGDQNQSCN*RLKTRLLAEQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQE 352
P ++S R K + Q ++ G IQ+KP+P QQEKLN NNE SVRMKLEAAKRKLQE
Sbjct: 348 PPPSSESGPGRPKPAAIKPQANNNGAIQRKPMPTQQEKLNSNNEPSVRMKLEAAKRKLQE 407
Query: 351 RYQEAENAKRQRTIQVVELHDLPKQSLAQRNQQTRPGNQHRQRANGRR 208
RYQEAENAK+QRTIQVVEL DLPKQ+ QRNQ RP NQ+R R N RR
Sbjct: 408 RYQEAENAKKQRTIQVVELRDLPKQNFGQRNQHMRPANQNRNRPNVRR 455
>emb|CDP19596.1| unnamed protein product [Coffea canephora]
Length = 474
Score = 118 bits (296), Expect(2) = 1e-33
Identities = 56/83 (67%), Positives = 70/83 (84%)
Frame = -2
Query: 477 EQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQERYQEAENAKRQRTIQVVE 298
+QKSDKGT QK+ +P Q KL +++A+VR+KLEA+KRKLQERYQEAENAKRQRT+QV+E
Sbjct: 387 QQKSDKGTSQKRELPSQPNKLRSSDDAAVRLKLEASKRKLQERYQEAENAKRQRTVQVME 446
Query: 297 LHDLPKQSLAQRNQQTRPGNQHR 229
LHD+PKQ+L RN RPGN +R
Sbjct: 447 LHDIPKQNLGHRNPNMRPGNFNR 469
Score = 53.9 bits (128), Expect(2) = 1e-33
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRN-------FEGPDDSNAPLNNDSKAENKRNQESMLRKQAP 608
NKNR+NGRK E VPR+ P D +A K+ QE++++KQA
Sbjct: 299 NKNRDNGRKPSLENHTVPRQKQQIRGNLISPPKDRKGEQMKKQEAVTKK-QEAVMKKQAA 357
Query: 607 PSKPNRPPKIESGPLKPKPPSDESGTRRPK 518
+KPN+P ESGP +P PS + +P+
Sbjct: 358 VAKPNKPSFGESGPGRPAKPSVDQYHMKPQ 387
>ref|XP_009790095.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Nicotiana sylvestris]
ref|XP_016462384.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Nicotiana tabacum]
Length = 457
Score = 121 bits (304), Expect(2) = 1e-33
Identities = 60/95 (63%), Positives = 75/95 (78%), Gaps = 5/95 (5%)
Frame = -2
Query: 477 EQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQERYQEAENAKRQRTIQVVE 298
+QKSD+GT+ K+PVP QQ KL ++E +V++KLEA KRKLQERYQEAENAKRQRTIQV+E
Sbjct: 363 QQKSDQGTVHKRPVPTQQNKLRRSDEDAVQVKLEATKRKLQERYQEAENAKRQRTIQVME 422
Query: 297 LHDLPKQSLAQ-----RNQQTRPGNQHRQRANGRR 208
LHD+PKQ ++ +N RPGN +R ANGRR
Sbjct: 423 LHDIPKQGISNQGLGLKNPHMRPGNNNRHWANGRR 457
Score = 50.8 bits (120), Expect(2) = 1e-33
Identities = 29/90 (32%), Positives = 49/90 (54%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRP 587
N+NR NGRK + + P R + D +A + K+E ++ QE++++KQ P +PN+P
Sbjct: 278 NENRGNGRKSSLDDQNNPVRKKQSADFFDAA-PKERKSEQQKKQETVIKKQTPVMRPNKP 336
Query: 586 PKIESGPLKPKPPSDESGTRRPKPVVQLKA 497
+SGP +P P E + + Q K+
Sbjct: 337 CGGDSGPGRPIKPVSEQKLKMSEMNFQQKS 366
>ref|XP_022852371.1| probable mediator of RNA polymerase II transcription subunit 26b
[Olea europaea var. sylvestris]
Length = 484
Score = 136 bits (343), Expect = 1e-33
Identities = 70/108 (64%), Positives = 82/108 (75%)
Frame = -2
Query: 531 PGDQNQSCN*RLKTRLLAEQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQE 352
PG + ++K + QK+DKG IQKKP+ QQ+ L N+EASVR+KLEAAKRKL E
Sbjct: 377 PGKPRLALQSKVKNEIKVLQKADKGMIQKKPMLPQQDTLRGNDEASVRVKLEAAKRKLHE 436
Query: 351 RYQEAENAKRQRTIQVVELHDLPKQSLAQRNQQTRPGNQHRQRANGRR 208
RYQEAENAK+QRT+QVVE DLPKQSLAQRNQ RPGN +R ANGRR
Sbjct: 437 RYQEAENAKKQRTVQVVEFRDLPKQSLAQRNQHMRPGNHNRHWANGRR 484
Score = 70.1 bits (170), Expect = 5e-10
Identities = 38/94 (40%), Positives = 54/94 (57%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRP 587
NKNREN R EK+ +P+R + PD S P D+K + K++ E++++KQ P KPN+P
Sbjct: 313 NKNRENVRSPILEKSSIPKRKDQTPDSSTRP--KDAKGDQKKDPEAVVKKQTPMCKPNKP 370
Query: 586 PKIESGPLKPKPPSDESGTRRPKPVVQLKAKNEI 485
P E+GP K P+ +Q K KNEI
Sbjct: 371 PSHETGPGK------------PRLALQSKVKNEI 392
>ref|XP_011079079.1| probable mediator of RNA polymerase II transcription subunit 26b
[Sesamum indicum]
Length = 441
Score = 135 bits (339), Expect = 3e-33
Identities = 72/115 (62%), Positives = 83/115 (72%), Gaps = 5/115 (4%)
Frame = -2
Query: 540 NRAPGDQNQSCN*RLKTRLLAEQKSD-----KGTIQKKPVPRQQEKLNCNNEASVRMKLE 376
NR P D+ S R K L + ++ KGT KKP P QQE +CNNEAS+++KLE
Sbjct: 328 NRLPTDE--SATRRPKPALQPKSNNETMIQQKGTKPKKPSPHQQENFDCNNEASIKIKLE 385
Query: 375 AAKRKLQERYQEAENAKRQRTIQVVELHDLPKQSLAQRNQQTRPGNQHRQRANGR 211
AAKRKL ERYQE E AK++RTIQVVELHDLPKQ+ AQRNQ RPGNQHRQ ANGR
Sbjct: 386 AAKRKLHERYQEVEKAKKRRTIQVVELHDLPKQTTAQRNQPMRPGNQHRQLANGR 440
Score = 70.9 bits (172), Expect = 2e-10
Identities = 41/94 (43%), Positives = 53/94 (56%)
Frame = -1
Query: 751 NGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRPPKIES 572
N R R + ++ FE P DS+ D K+E K NQES+L+KQAPP KPNR P
Sbjct: 277 NPRDNRALNKNQEKQKFESPSDSSTH-PKDQKSEQKTNQESILKKQAPPCKPNRLP---- 331
Query: 571 GPLKPKPPSDESGTRRPKPVVQLKAKNEIIGRTK 470
+DES TRRPKP +Q K+ NE + + K
Sbjct: 332 --------TDESATRRPKPALQPKSNNETMIQQK 357
>ref|XP_015088875.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Solanum pennellii]
Length = 455
Score = 119 bits (297), Expect(2) = 3e-33
Identities = 61/94 (64%), Positives = 73/94 (77%), Gaps = 4/94 (4%)
Frame = -2
Query: 477 EQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQERYQEAENAKRQRTIQVVE 298
+QKSDKGTIQK+PV QQ KL ++E +V++KLEA KRKLQERYQEAE AKRQRTIQV+E
Sbjct: 362 QQKSDKGTIQKRPVESQQNKLRRSDEDAVQVKLEATKRKLQERYQEAEKAKRQRTIQVME 421
Query: 297 LHDLPK----QSLAQRNQQTRPGNQHRQRANGRR 208
LHD+PK Q + +N RPGN +R ANGRR
Sbjct: 422 LHDIPKKGPNQGVGLKNAHMRPGNNNRHWANGRR 455
Score = 52.0 bits (123), Expect(2) = 3e-33
Identities = 28/76 (36%), Positives = 44/76 (57%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRP 587
N NR NGRK ++P + + D SNA ++K E ++ QE++++KQ +KP +P
Sbjct: 277 NVNRGNGRKPSLGNQNIPFQKKQSADCSNAS-PKENKGEQQKKQEAVIKKQTTVAKPTKP 335
Query: 586 PKIESGPLKPKPPSDE 539
ESGP +P P+ E
Sbjct: 336 SGGESGPGRPTKPALE 351
>ref|XP_006339256.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Solanum tuberosum]
Length = 455
Score = 119 bits (298), Expect(2) = 3e-32
Identities = 61/94 (64%), Positives = 73/94 (77%), Gaps = 4/94 (4%)
Frame = -2
Query: 477 EQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQERYQEAENAKRQRTIQVVE 298
+QKSDKGTIQK+PV QQ KL ++E +V++KLEA KRKLQERYQE ENAKRQRTIQV+E
Sbjct: 362 QQKSDKGTIQKRPVAPQQNKLRHSDEDAVQVKLEATKRKLQERYQEVENAKRQRTIQVME 421
Query: 297 LHDLPK----QSLAQRNQQTRPGNQHRQRANGRR 208
LHD+PK Q + +N RPGN +R ANGRR
Sbjct: 422 LHDIPKKGPNQGVGLKNAHMRPGNNNRHWANGRR 455
Score = 48.1 bits (113), Expect(2) = 3e-32
Identities = 27/76 (35%), Positives = 42/76 (55%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRP 587
N NR NGRK ++P + + D NA ++K E ++ QE++++KQ KP +P
Sbjct: 277 NANRGNGRKPSLGNQNIPFQKKQSADCFNAS-PKENKGEQQKKQEAVIKKQTTVVKPTKP 335
Query: 586 PKIESGPLKPKPPSDE 539
ESGP +P P+ E
Sbjct: 336 SGGESGPGRPIKPALE 351
>ref|XP_018810566.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X1 [Juglans regia]
Length = 454
Score = 123 bits (309), Expect(2) = 3e-31
Identities = 59/90 (65%), Positives = 72/90 (80%)
Frame = -2
Query: 477 EQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQERYQEAENAKRQRTIQVVE 298
+QKSDK IQK+P QQ+K C++E +V++KLEA KRKLQERYQ+AENAKRQRTIQV+E
Sbjct: 365 KQKSDKVAIQKRPAGDQQDKFKCSDEVAVQVKLEATKRKLQERYQQAENAKRQRTIQVME 424
Query: 297 LHDLPKQSLAQRNQQTRPGNQHRQRANGRR 208
LHDLPKQ L RN +PGN +R A+GRR
Sbjct: 425 LHDLPKQGLGHRNPHVKPGNHNRHWAHGRR 454
Score = 40.8 bits (94), Expect(2) = 3e-31
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRP 587
+KNR+NGRK E + ++ + P+ N L D+K+ + QE L KP++P
Sbjct: 288 SKNRDNGRKPAQECQNSTKQKLQMPNVVNV-LAKDNKSHQVKKQEVFL-------KPSKP 339
Query: 586 PKIESGPLKPKPPSDE 539
+ GP +P PS E
Sbjct: 340 SNTDYGPGRPLKPSTE 355
>ref|XP_018810567.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X2 [Juglans regia]
Length = 452
Score = 123 bits (309), Expect(2) = 3e-31
Identities = 59/90 (65%), Positives = 72/90 (80%)
Frame = -2
Query: 477 EQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQERYQEAENAKRQRTIQVVE 298
+QKSDK IQK+P QQ+K C++E +V++KLEA KRKLQERYQ+AENAKRQRTIQV+E
Sbjct: 363 KQKSDKVAIQKRPAGDQQDKFKCSDEVAVQVKLEATKRKLQERYQQAENAKRQRTIQVME 422
Query: 297 LHDLPKQSLAQRNQQTRPGNQHRQRANGRR 208
LHDLPKQ L RN +PGN +R A+GRR
Sbjct: 423 LHDLPKQGLGHRNPHVKPGNHNRHWAHGRR 452
Score = 40.8 bits (94), Expect(2) = 3e-31
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRP 587
+KNR+NGRK E + ++ + P+ N L D+K+ + QE L KP++P
Sbjct: 286 SKNRDNGRKPAQECQNSTKQKLQMPNVVNV-LAKDNKSHQVKKQEVFL-------KPSKP 337
Query: 586 PKIESGPLKPKPPSDE 539
+ GP +P PS E
Sbjct: 338 SNTDYGPGRPLKPSTE 353
>ref|XP_018853209.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X1 [Juglans regia]
ref|XP_018820815.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X1 [Juglans regia]
Length = 462
Score = 125 bits (315), Expect(2) = 4e-31
Identities = 60/88 (68%), Positives = 73/88 (82%)
Frame = -2
Query: 471 KSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQERYQEAENAKRQRTIQVVELH 292
KSDK TIQK+PV QQ+K C++E +V++KLEA KRKLQERYQ+AENAKRQRTIQV+ELH
Sbjct: 375 KSDKVTIQKRPVTGQQDKFKCSDEVAVQVKLEATKRKLQERYQQAENAKRQRTIQVMELH 434
Query: 291 DLPKQSLAQRNQQTRPGNQHRQRANGRR 208
DLPKQ L RN +PGNQ+R ++GRR
Sbjct: 435 DLPKQGLGHRNPHVKPGNQNRHWSHGRR 462
Score = 38.1 bits (87), Expect(2) = 4e-31
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRP 587
+KNR+ GRK E + +R + P+ +N L D+K+ + QE +L KPN+P
Sbjct: 296 SKNRDYGRKPMQECQNNTKRKQQTPNVANV-LAKDNKSHQVKKQEVVL-------KPNKP 347
Query: 586 PKIESGPLKPKPPSDE 539
+ GP +P S E
Sbjct: 348 SNTDYGPGRPPKISTE 363
>ref|XP_018853210.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X2 [Juglans regia]
ref|XP_018820816.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X2 [Juglans regia]
Length = 461
Score = 125 bits (315), Expect(2) = 4e-31
Identities = 60/88 (68%), Positives = 73/88 (82%)
Frame = -2
Query: 471 KSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQERYQEAENAKRQRTIQVVELH 292
KSDK TIQK+PV QQ+K C++E +V++KLEA KRKLQERYQ+AENAKRQRTIQV+ELH
Sbjct: 374 KSDKVTIQKRPVTGQQDKFKCSDEVAVQVKLEATKRKLQERYQQAENAKRQRTIQVMELH 433
Query: 291 DLPKQSLAQRNQQTRPGNQHRQRANGRR 208
DLPKQ L RN +PGNQ+R ++GRR
Sbjct: 434 DLPKQGLGHRNPHVKPGNQNRHWSHGRR 461
Score = 38.1 bits (87), Expect(2) = 4e-31
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRP 587
+KNR+ GRK E + +R + P+ +N L D+K+ + QE +L KPN+P
Sbjct: 295 SKNRDYGRKPMQECQNNTKRKQQTPNVANV-LAKDNKSHQVKKQEVVL-------KPNKP 346
Query: 586 PKIESGPLKPKPPSDE 539
+ GP +P S E
Sbjct: 347 SNTDYGPGRPPKISTE 362
>dbj|GAY43676.1| hypothetical protein CUMW_076320 [Citrus unshiu]
Length = 458
Score = 120 bits (301), Expect(2) = 4e-31
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 1/112 (0%)
Frame = -2
Query: 540 NRAPGDQ-NQSCN*RLKTRLLAEQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKR 364
N PG Q+ ++ +QKSDK TI KKP+ Q KL ++E +V++KLEA KR
Sbjct: 347 NSGPGRPLKQNMGQKVDNESKLQQKSDKATINKKPLNSQHNKLKSSDEDAVQVKLEATKR 406
Query: 363 KLQERYQEAENAKRQRTIQVVELHDLPKQSLAQRNQQTRPGNQHRQRANGRR 208
KLQE YQ AENAK+QRTIQV+ELHDLPKQ L RN Q RPGN +R ANGRR
Sbjct: 407 KLQESYQLAENAKKQRTIQVMELHDLPKQGLGNRNPQLRPGNYNRHWANGRR 458
Score = 43.5 bits (101), Expect(2) = 4e-31
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = -1
Query: 763 KNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKP-NRP 587
KNRE+GRK E ++ +R + P++ N L D+ + + QE+++R P+KP N+P
Sbjct: 289 KNRESGRKPSVENQNIAKRKQQTPNEPNV-LAKDNNSLQMKRQEAVVR----PNKPSNKP 343
Query: 586 PKIESGPLKP 557
SGP +P
Sbjct: 344 SSTNSGPGRP 353
>ref|XP_023925776.1| probable mediator of RNA polymerase II transcription subunit 26b
isoform X1 [Quercus suber]
ref|XP_023925777.1| probable mediator of RNA polymerase II transcription subunit 26b
isoform X1 [Quercus suber]
gb|POE94060.1| putative mediator of rna polymerase ii transcription subunit 26b
[Quercus suber]
Length = 463
Score = 125 bits (315), Expect(2) = 5e-31
Identities = 59/91 (64%), Positives = 76/91 (83%)
Frame = -2
Query: 480 AEQKSDKGTIQKKPVPRQQEKLNCNNEASVRMKLEAAKRKLQERYQEAENAKRQRTIQVV 301
++QKS+K +IQK+PV +Q+K C++E +V++KLEA KRKLQERYQ+AENAKRQRTIQV+
Sbjct: 373 SQQKSNKASIQKRPVTVEQDKFKCSDEVAVQVKLEATKRKLQERYQQAENAKRQRTIQVM 432
Query: 300 ELHDLPKQSLAQRNQQTRPGNQHRQRANGRR 208
ELHDLPKQ L RN +PGN +RQ A+GRR
Sbjct: 433 ELHDLPKQGLGHRNPHMKPGNHNRQWAHGRR 463
Score = 37.7 bits (86), Expect(2) = 5e-31
Identities = 26/76 (34%), Positives = 37/76 (48%)
Frame = -1
Query: 766 NKNRENGRKRRPEKTDVPRRNFEGPDDSNAPLNNDSKAENKRNQESMLRKQAPPSKPNRP 587
+KNR+ GRK E + R + + +N L D+K+ R QE ++R PN P
Sbjct: 297 SKNRDYGRKPSQESQNNMRLKQQTINAANV-LIKDNKSHQVRKQELVVR-------PNMP 348
Query: 586 PKIESGPLKPKPPSDE 539
SGP +P PS E
Sbjct: 349 SNTNSGPGRPLKPSSE 364