BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00007516
         (2122 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011086680.1| RNA polymerase sigma factor sigB [Sesamum in...   842   0.0  
gb|PIN25165.1| hypothetical protein CDL12_02108 [Handroanthus im...   819   0.0  
ref|XP_012849681.1| PREDICTED: RNA polymerase sigma factor sigB ...   739   0.0  
ref|XP_022859059.1| RNA polymerase sigma factor sigB-like [Olea ...   707   0.0  
ref|XP_022896521.1| RNA polymerase sigma factor sigB-like [Olea ...   699   0.0  
ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-...   652   0.0  
ref|XP_019224549.1| PREDICTED: RNA polymerase sigma factor sigB-...   646   0.0  
ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-...   645   0.0  
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ...   641   0.0  
ref|XP_017977747.1| PREDICTED: RNA polymerase sigma factor sigB ...   639   0.0  
ref|XP_021283422.1| RNA polymerase sigma factor sigB [Herrania u...   637   0.0  
gb|PHT35925.1| RNA polymerase sigma factor sigB [Capsicum baccatum]   638   0.0  
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB ...   635   0.0  
ref|XP_017977746.1| PREDICTED: RNA polymerase sigma factor sigB ...   634   0.0  
ref|XP_015061066.1| PREDICTED: RNA polymerase sigma factor sigB ...   634   0.0  
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB ...   631   0.0  
ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB ...   629   0.0  
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-...   627   0.0  
ref|XP_012070322.1| RNA polymerase sigma factor sigB [Jatropha c...   627   0.0  
gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sin...   627   0.0  

>ref|XP_011086680.1| RNA polymerase sigma factor sigB [Sesamum indicum]
          Length = 613

 Score =  842 bits (2174), Expect = 0.0
 Identities = 454/613 (74%), Positives = 479/613 (78%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MSCLLPQFKCSPDTFAVNFKSQSH  V SSK+R + +FRTQCI             T+L+
Sbjct: 1    MSCLLPQFKCSPDTFAVNFKSQSHTSVYSSKSREATSFRTQCILSTTPPPTLTATTTVLD 60

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAYVGA 1735
            FE+L+LS LEAIPN VPADR            MLDLE LPSLDAHPI+ A NKP  YVGA
Sbjct: 61   FEKLQLSSLEAIPNQVPADRSWSTPTSSAKTAMLDLEGLPSLDAHPITTAANKPWTYVGA 120

Query: 1734 FGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPD 1555
              PPSEV LGAN D ETLLTS                          AMMVSHHK TK +
Sbjct: 121  IAPPSEVTLGANLDTETLLTSEEAVIAAAASEALALAKAAVKVAKDAAMMVSHHKPTKSN 180

Query: 1554 STTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDVEPSAE 1375
            S+ TG+  +V+T + EK+QLAHLAERV +R+ KVAE+GLGE  PA+  L ESDDVEPSAE
Sbjct: 181  SSATGMFADVNTPIFEKNQLAHLAERVDIRDAKVAEVGLGENYPAAHSLTESDDVEPSAE 240

Query: 1374 ELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYN 1195
            ELEFLEAQL+KSIAVRSKRQT              ANI               VQDVDY+
Sbjct: 241  ELEFLEAQLSKSIAVRSKRQTERRARRTRAAEKAAANIVSVKSGSSSRKKRSAVQDVDYS 300

Query: 1194 DPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGV 1015
            DP                SEEQVLS GIQVLLKLERLQ ELT+R GG PTF+QWAAAAGV
Sbjct: 301  DPLRYLRGTTSSSRLLTASEEQVLSSGIQVLLKLERLQMELTQRYGGQPTFAQWAAAAGV 360

Query: 1014 DLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 835
            D +TLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD
Sbjct: 361  DQKTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 420

Query: 834  ATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDD 655
            ATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR PDD
Sbjct: 421  ATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDD 480

Query: 654  EEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFM 475
            EEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAET+EDLLIKQFM
Sbjct: 481  EEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETAEDLLIKQFM 540

Query: 474  KQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN 295
            KQDLAKVLDSLNPREKQVV WRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN
Sbjct: 541  KQDLAKVLDSLNPREKQVVIWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN 600

Query: 294  KKRTKHLQQYVMP 256
            KKRTKHLQQYVMP
Sbjct: 601  KKRTKHLQQYVMP 613


>gb|PIN25165.1| hypothetical protein CDL12_02108 [Handroanthus impetiginosus]
          Length = 611

 Score =  819 bits (2115), Expect = 0.0
 Identities = 445/613 (72%), Positives = 476/613 (77%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MSCLLPQFKCSPDTFAVNFKSQS+  V SSK+R +INFRTQCI             T+LE
Sbjct: 1    MSCLLPQFKCSPDTFAVNFKSQSNPSVFSSKSREAINFRTQCILSTTSPPTLTAATTVLE 60

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAYVGA 1735
            +E+L+LSPLEAIPNSVP  R           ++L LEKLPSLD HPI IA +KP  YVGA
Sbjct: 61   YEKLQLSPLEAIPNSVPPGRSWTKPTSTANSSVLHLEKLPSLDTHPIPIAASKPWTYVGA 120

Query: 1734 FGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPD 1555
             GPPSEVNL  N DKE+L+TS                          AMMVSHHKS KP 
Sbjct: 121  VGPPSEVNLSTNLDKESLITSEEAVISAAASEALALAKAAVKVAKDAAMMVSHHKSIKPG 180

Query: 1554 STTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDVEPSAE 1375
            S T  IL +VDTS+ EKSQLA   +RVV   PK AEIGLGE  PAS PL+ESDDVEPSA+
Sbjct: 181  SRTRRILSDVDTSIFEKSQLADPVQRVV-GGPKAAEIGLGEKYPASYPLSESDDVEPSAK 239

Query: 1374 ELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYN 1195
            ELEFLEAQL+KSIAVRSKRQT              AN+                Q+VDY+
Sbjct: 240  ELEFLEAQLSKSIAVRSKRQTERKARRTRAAEKAAANVVSVKSGSSRKKRSAV-QEVDYS 298

Query: 1194 DPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGV 1015
            DP                SEEQVLSEGIQVLLKLERLQEEL +RCGG PTF+QWAAAA V
Sbjct: 299  DPLRYLRGTTSSSRLLTSSEEQVLSEGIQVLLKLERLQEELKQRCGGQPTFAQWAAAACV 358

Query: 1014 DLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 835
            D +TLRKQINYG LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD
Sbjct: 359  DQKTLRKQINYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 418

Query: 834  ATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDD 655
            A+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDD
Sbjct: 419  ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDD 478

Query: 654  EEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFM 475
            EEVA+ATGLSMKRLSAVMLTPKAPRSLDQK+GINQDLKPS+VIADP+AETSEDLLIKQFM
Sbjct: 479  EEVAQATGLSMKRLSAVMLTPKAPRSLDQKVGINQDLKPSEVIADPDAETSEDLLIKQFM 538

Query: 474  KQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN 295
            KQDLAKVLDSL+PREKQV+KWRFGLEDGRMKTLQEIGE MGVSRERIRQIESCAFRKLKN
Sbjct: 539  KQDLAKVLDSLSPREKQVIKWRFGLEDGRMKTLQEIGEAMGVSRERIRQIESCAFRKLKN 598

Query: 294  KKRTKHLQQYVMP 256
            KKRTKHL QYV P
Sbjct: 599  KKRTKHLLQYVTP 611


>ref|XP_012849681.1| PREDICTED: RNA polymerase sigma factor sigB [Erythranthe guttata]
 gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Erythranthe guttata]
          Length = 589

 Score =  739 bits (1907), Expect = 0.0
 Identities = 421/614 (68%), Positives = 456/614 (74%), Gaps = 2/614 (0%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXT-ML 1918
            MSCLLPQFKCSPDTFAVNFKSQ+   V+SSK+R SINFRTQC+             T +L
Sbjct: 1    MSCLLPQFKCSPDTFAVNFKSQTLFTVHSSKSRESINFRTQCVLSTTSPPPTMAATTTLL 60

Query: 1917 EFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAYVG 1738
            EFE+L+LSPLE IPNS+PADR            +LDL+KL SL      +A NK L YVG
Sbjct: 61   EFEKLQLSPLETIPNSLPADRSWTTPRAKTS--LLDLDKLTSLP-----VASNKTLTYVG 113

Query: 1737 AFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKP 1558
            + GPPSE+NLGAN DKE L+TS                          AMMVS H+STKP
Sbjct: 114  SVGPPSEINLGANLDKEALITSDEAVITAAASEALALAKAAVKVAKDAAMMVSLHRSTKP 173

Query: 1557 DSTTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDVE-PS 1381
            D+ +     EVDTS          AERVVVRE   AEIG GE +     L ESDD E PS
Sbjct: 174  DTKS---FLEVDTS----------AERVVVRE---AEIGSGEND--DHVLGESDDSEEPS 215

Query: 1380 AEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVD 1201
            AEELE L+ QL+ SIAVRSKRQ               AN+                Q+VD
Sbjct: 216  AEELELLDLQLSSSIAVRSKRQIERKVRRGRAAEKAAANVVSVKSGSSKKKRSPV-QEVD 274

Query: 1200 YNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAA 1021
            Y+DP                SEEQVLSEGIQVLLKLERLQ EL ER GG P++SQWAAAA
Sbjct: 275  YSDPLRYLRATTSSTRLLTASEEQVLSEGIQVLLKLERLQVELIERFGGEPSYSQWAAAA 334

Query: 1020 GVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 841
            GVD +TLR+QINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK
Sbjct: 335  GVDQKTLREQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEK 394

Query: 840  FDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLP 661
            FDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR+P
Sbjct: 395  FDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRVP 454

Query: 660  DDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQ 481
            +DEEVAEATGLSMKRLSAVMLTPK PRSLDQKIG+NQDLKPS+VI+DPEAETSE+LLIKQ
Sbjct: 455  NDEEVAEATGLSMKRLSAVMLTPKPPRSLDQKIGVNQDLKPSEVISDPEAETSEELLIKQ 514

Query: 480  FMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKL 301
            FMKQDLA VLDSLNPREKQVVKWRFG+EDGRMKTLQEIGELMGVSRER+RQIESCAFRKL
Sbjct: 515  FMKQDLADVLDSLNPREKQVVKWRFGIEDGRMKTLQEIGELMGVSRERVRQIESCAFRKL 574

Query: 300  KNKKRTKHLQQYVM 259
            KNKKRTK LQQYVM
Sbjct: 575  KNKKRTKQLQQYVM 588


>ref|XP_022859059.1| RNA polymerase sigma factor sigB-like [Olea europaea var. sylvestris]
          Length = 598

 Score =  707 bits (1825), Expect = 0.0
 Identities = 396/613 (64%), Positives = 439/613 (71%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MSCLLP F+C PDTF VNFKSQ+H   + SK+R  I F+T+CI              +LE
Sbjct: 1    MSCLLPTFRCLPDTFLVNFKSQNHTATHPSKSRDPIYFQTKCILSTATAT-------ILE 53

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAYVGA 1735
             E+L+L  LEA+ NSVPADR               L KLPS D H  SIA N+P  Y+GA
Sbjct: 54   LEKLQLPSLEAMSNSVPADRSWKPTGTTSVLEFEKL-KLPSFDVHSNSIAANRPWTYIGA 112

Query: 1734 FGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPD 1555
             GPP+E N  A    ETLLTS                          A MV +  +T   
Sbjct: 113  DGPPTEANFQATLATETLLTSEEAVVVVVAAEALALAKAAVKVAKDAAKMVGNRTATSDC 172

Query: 1554 STTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDVEPSAE 1375
             TT     EVD S +EK+QLA+ AERV  RE KV EIGLGE + AS  L ESD VEPS E
Sbjct: 173  KTT-----EVDNSFMEKNQLAYFAERVDARESKVTEIGLGENDSASYLLKESD-VEPSHE 226

Query: 1374 ELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYN 1195
            ELE LEAQL+KSIAVRSKRQT              ANI                QD+DY+
Sbjct: 227  ELELLEAQLSKSIAVRSKRQTERKAKRARAAQKAAANIVSVKSGSTSRKKRVL-QDIDYS 285

Query: 1194 DPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGV 1015
            DP                +EEQ  S GIQ LLKLERLQEEL ER G   TF+QWAAAAGV
Sbjct: 286  DPLRYLRGTTSSSRLLTAAEEQKFSSGIQDLLKLERLQEELRERYGDQLTFAQWAAAAGV 345

Query: 1014 DLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 835
            D +TLR+++NYGI+CKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFD
Sbjct: 346  DQKTLRERLNYGIICKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFD 405

Query: 834  ATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDD 655
            A+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGR PDD
Sbjct: 406  ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFNENGRQPDD 465

Query: 654  EEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFM 475
            +EVAEATGLSMKRLS+V+L PKAPRSLDQKIGINQDLKPS+VIADPEAETSED+L+K+FM
Sbjct: 466  DEVAEATGLSMKRLSSVLLIPKAPRSLDQKIGINQDLKPSEVIADPEAETSEDVLMKEFM 525

Query: 474  KQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN 295
            KQDLAKVLD+LN REKQV++WRFGL DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN
Sbjct: 526  KQDLAKVLDTLNLREKQVIRWRFGLGDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN 585

Query: 294  KKRTKHLQQYVMP 256
            K+RTKHLQQYVMP
Sbjct: 586  KRRTKHLQQYVMP 598


>ref|XP_022896521.1| RNA polymerase sigma factor sigB-like [Olea europaea var. sylvestris]
          Length = 601

 Score =  699 bits (1805), Expect = 0.0
 Identities = 389/613 (63%), Positives = 444/613 (72%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MSCL+PQF+C PDTF+VNFKSQ+H+  + +K+R  I FRTQCI              +LE
Sbjct: 1    MSCLVPQFRCLPDTFSVNFKSQNHSSTHPAKSRDPIYFRTQCILSTATTT-------VLE 53

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAYVGA 1735
             E+L+L  LE I NSVPADR             LD  KLPSLD H  SIA N+   Y+ A
Sbjct: 54   LEKLQLPSLEVISNSVPADRSSKPTRSAVLD--LDKLKLPSLDVHSNSIAANRTWTYIEA 111

Query: 1734 FGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPD 1555
              PP+E NL A    ETL+T                           AMMV +  +   D
Sbjct: 112  VCPPTEANLQATLATETLITIEEAVVAAAAAEALALAKAAVKVAKDAAMMVCNRTAMMSD 171

Query: 1554 STTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDVEPSAE 1375
              TT I+PEVD  ++E++QLA+ +ERV  RE KV  +GLGE + AS  L ESD VEPS E
Sbjct: 172  CETTEIMPEVDNLLLERNQLANFSERVNGRESKVT-VGLGENHSASFLLTESD-VEPSHE 229

Query: 1374 ELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYN 1195
            ELE L+AQL++SIAVRSKRQ               AN+                QD+DY+
Sbjct: 230  ELELLKAQLSRSIAVRSKRQIERKARRTRAAQKAAANVVCVKSGSTSRKKGVL-QDIDYS 288

Query: 1194 DPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGV 1015
            DP                +EEQ LS GIQ LLKLERLQ+ELTER G   TF+QWAAAA V
Sbjct: 289  DPLRYLRGTTSSSKLLTAAEEQKLSVGIQDLLKLERLQKELTERYGDQFTFAQWAAAASV 348

Query: 1014 DLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFD 835
            D +TLR+++NYGILCKDKMIKSNIRLVISIAK YQG GMNLQDLVQEGCRGLVRGAEKFD
Sbjct: 349  DQKTLRERLNYGILCKDKMIKSNIRLVISIAKYYQGVGMNLQDLVQEGCRGLVRGAEKFD 408

Query: 834  ATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDD 655
            A+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATY+VKEARKQL++ENGR PD+
Sbjct: 409  ASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYKVKEARKQLFNENGRQPDN 468

Query: 654  EEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFM 475
            EEVAEATGLSMKRL+AV+ TPKAPRSLDQKIGINQ+LKPS++IADPEAET+EDLLIK+FM
Sbjct: 469  EEVAEATGLSMKRLNAVLFTPKAPRSLDQKIGINQNLKPSEIIADPEAETAEDLLIKEFM 528

Query: 474  KQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN 295
            KQDLAKVLD+LNPREKQV++WRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN
Sbjct: 529  KQDLAKVLDTLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKN 588

Query: 294  KKRTKHLQQYVMP 256
            KKRTKHLQQYV+P
Sbjct: 589  KKRTKHLQQYVIP 601


>ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
            sylvestris]
 ref|XP_016439073.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana tabacum]
          Length = 629

 Score =  652 bits (1682), Expect = 0.0
 Identities = 364/616 (59%), Positives = 422/616 (68%), Gaps = 5/616 (0%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MS LLPQFK  PDTF + FK+  ++ +  SK R  I+ RTQCI             T+L+
Sbjct: 13   MSYLLPQFKSLPDTFVLCFKTNQNSTIQLSKGRDHIHLRTQCILATTSAATSTATSTVLD 72

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLE--KLPSLDAHPISIAENKPLAYV 1741
             E+LKL  +E + +SV A+R            +LD+   KL S +A+P S+A ++P  Y 
Sbjct: 73   IEKLKLPSIEILSSSVAAERSWKPPSTATSA-VLDIPRLKLLSFEANPDSVAPDRPWTYT 131

Query: 1740 GAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTK 1561
            GA GPP+E N  +    E L+TS                           ++V H+    
Sbjct: 132  GAVGPPTEANTKSALATENLVTSDEAVVAAAAAEAVALAKAALKFAKDAVLLVGHNNLKN 191

Query: 1560 PDSTTTGILPEVDTSMVEKSQLAHLAERVVVR---EPKVAEIGLGEINPASDPLAESDDV 1390
             D    G L E  T+  E   LA  +E   VR   E K +E+   E +   D L +SDD+
Sbjct: 192  SDDAGRGTLSEARTTPFESVPLAQPSETGRVRVGAEFKGSEMKWSESSLFEDSLTDSDDL 251

Query: 1389 EPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQ 1210
            EPS EELE L++QL+  IAV+S RQT              AN+               VQ
Sbjct: 252  EPSPEELEILQSQLSNVIAVKSTRQTERKARRGRAAERAAANVVSVKSGSTSRKKRTSVQ 311

Query: 1209 DVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWA 1030
            +VDY+DP                SEEQ LS GIQ LLKLERL++EL  RCGG PT +QWA
Sbjct: 312  EVDYSDPLRYLRGTTGSSRLLTASEEQELSRGIQDLLKLERLEQELAARCGGQPTIAQWA 371

Query: 1029 AAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 850
            AAAGV+ +TLRK++NYGILCKDKMIKSNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRG
Sbjct: 372  AAAGVEQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRG 431

Query: 849  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 670
            AEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENG
Sbjct: 432  AEKFDAAKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFTENG 491

Query: 669  RLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLL 490
            RLP+DEEVAEATGLSMKRL+AVMLTPKAPRSLDQKIG NQ LKPS+VIADPEAETSE++L
Sbjct: 492  RLPNDEEVAEATGLSMKRLTAVMLTPKAPRSLDQKIGFNQSLKPSEVIADPEAETSEEML 551

Query: 489  IKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 310
            +KQFM+QDL KVLD+LNPREKQVVKWRFGL DGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 552  MKQFMRQDLEKVLDTLNPREKQVVKWRFGLADGRMKTLQEIGELMGVSRERIRQIESCAF 611

Query: 309  RKLKNKKRTKHLQQYV 262
            RKLKNKKRTK LQQY+
Sbjct: 612  RKLKNKKRTKFLQQYI 627


>ref|XP_019224549.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
            attenuata]
 gb|OIT33290.1| rna polymerase sigma factor sigb [Nicotiana attenuata]
          Length = 641

 Score =  646 bits (1667), Expect = 0.0
 Identities = 362/616 (58%), Positives = 422/616 (68%), Gaps = 5/616 (0%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MS LLPQFK  PDTF + FK+  ++ +  SK R  I+ RTQCI             T+L 
Sbjct: 25   MSYLLPQFKSLPDTFVLCFKTNQNSTIQLSKGRDHIHLRTQCILATTSAATSTATSTVLN 84

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLE--KLPSLDAHPISIAENKPLAYV 1741
             E+LKL  +E + +SV  +R            +LD+   KL S +A+P S+A ++P  Y 
Sbjct: 85   IEKLKLPSIEILSSSVAVERSWKPPSTATSA-VLDIPRLKLLSFEANPDSVAPDRPWTYT 143

Query: 1740 GAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTK 1561
            GA GPP+E N  +    E L+TS                           ++VS +    
Sbjct: 144  GAVGPPTEANTKSALATENLVTSDEAVVAAAAAEAVALAKAALKFAKDAVLLVSQNNLNN 203

Query: 1560 PDSTTTGILPEVDTSMVEKSQLAHLAE--RVVV-REPKVAEIGLGEINPASDPLAESDDV 1390
             D    G L E  T+  E   LA  +E  RV V  E K +E+   + +   D L +SDD+
Sbjct: 204  SDDAGRGTLSEARTTPFESVPLAQPSETGRVGVGAEFKGSEMKWSKSSLFEDSLTDSDDL 263

Query: 1389 EPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQ 1210
            EPS EELE L++QL+  IAV+S RQT              AN+               VQ
Sbjct: 264  EPSPEELEILQSQLSNVIAVKSTRQTERKARRGRAAERAAANVVSVKSGSTSRKKRTSVQ 323

Query: 1209 DVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWA 1030
            +VDY+DP                SEEQ LS GIQ LLKLERL++EL ERCGG PT +QWA
Sbjct: 324  EVDYSDPLRYLRGTTGSSRLLTASEEQELSRGIQDLLKLERLEQELAERCGGQPTIAQWA 383

Query: 1029 AAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 850
            AAAGV+ +TLRK++NYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRG
Sbjct: 384  AAAGVEQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRG 443

Query: 849  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 670
            AEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENG
Sbjct: 444  AEKFDAAKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFTENG 503

Query: 669  RLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLL 490
            RLP+DEE+AEATGLSMKRL+AVMLTPKAPRSLDQKIG NQ LKPS+VIADPEAETSE++L
Sbjct: 504  RLPNDEELAEATGLSMKRLTAVMLTPKAPRSLDQKIGFNQSLKPSEVIADPEAETSEEML 563

Query: 489  IKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 310
            +KQFM+QDL KVLD+LNPREKQVVKWRFGL DGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 564  MKQFMRQDLEKVLDTLNPREKQVVKWRFGLADGRMKTLQEIGELMGVSRERIRQIESCAF 623

Query: 309  RKLKNKKRTKHLQQYV 262
            RKLKNKKRTK LQQY+
Sbjct: 624  RKLKNKKRTKFLQQYI 639


>ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
            tomentosiformis]
 ref|XP_016487692.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana tabacum]
          Length = 641

 Score =  645 bits (1664), Expect = 0.0
 Identities = 360/616 (58%), Positives = 422/616 (68%), Gaps = 5/616 (0%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MS LLPQFK  PDTF + FK+  ++ +  SK R  I+ RTQCI             T+L+
Sbjct: 25   MSYLLPQFKSLPDTFVLCFKTNQNSTIQLSKGRDHIHLRTQCILATTSAATSTATSTVLD 84

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLE--KLPSLDAHPISIAENKPLAYV 1741
             E+LKL  +E + +SV A+R            +LD+   KL S +A+P S+A ++P  Y 
Sbjct: 85   IEKLKLPSIEILSSSVAAERSWKPPSTATSA-VLDIPRLKLLSFEANPDSVAPDRPWTYT 143

Query: 1740 GAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTK 1561
            G  GPP+E N  +    E L+TS                           ++V H+    
Sbjct: 144  GPVGPPTEANTKSVLATENLVTSDEAVVAAAAAEAVALAKAALKFAKDVVLLVGHNNLKN 203

Query: 1560 PDSTTTGILPEVDTSMVEKSQLAHLAE--RVVV-REPKVAEIGLGEINPASDPLAESDDV 1390
             D    G L E  T+  E   LA  +E  RV V  E K +E+   E +   D L +SDD+
Sbjct: 204  SDDAGRGTLSEARTTPFESVHLAQPSETGRVGVGAEFKGSEMKWSESSLLEDSLTDSDDL 263

Query: 1389 EPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQ 1210
            +PS EELE L++QL+  IAV+S RQT              AN+               VQ
Sbjct: 264  DPSPEELEILQSQLSNVIAVKSTRQTERKARRGRAAERAAANVVSVKSGSTSRKKRTSVQ 323

Query: 1209 DVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWA 1030
            +VDY+DP                SEEQ LS GIQ  LKLERL++EL +RCGG PT +QWA
Sbjct: 324  EVDYSDPLRYLRGTTGSSRLLTASEEQELSRGIQDQLKLERLEQELADRCGGQPTIAQWA 383

Query: 1029 AAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 850
            AAAGV+ +TLRK++NYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRG
Sbjct: 384  AAAGVEQKTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRG 443

Query: 849  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 670
            AEKFDA KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL++ENG
Sbjct: 444  AEKFDAAKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLFTENG 503

Query: 669  RLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLL 490
            RLP+DEEVAEATGLSMKRL+AVMLTPKAPRSLDQKIG NQ LKPS+VIADPEAETSE++L
Sbjct: 504  RLPNDEEVAEATGLSMKRLTAVMLTPKAPRSLDQKIGFNQSLKPSEVIADPEAETSEEML 563

Query: 489  IKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 310
            +KQFM+QDL +VLD+LNPREKQVVKWRFGL DGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 564  MKQFMRQDLERVLDTLNPREKQVVKWRFGLADGRMKTLQEIGELMGVSRERIRQIESCAF 623

Query: 309  RKLKNKKRTKHLQQYV 262
            RKLKNKKRTK LQQY+
Sbjct: 624  RKLKNKKRTKFLQQYI 639


>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
            grandis]
 gb|KCW76739.1| hypothetical protein EUGRSUZ_D01094 [Eucalyptus grandis]
          Length = 588

 Score =  641 bits (1654), Expect = 0.0
 Identities = 359/613 (58%), Positives = 415/613 (67%), Gaps = 2/613 (0%)
 Frame = -2

Query: 2091 SCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLEF 1912
            SCLLPQFKC PDTF++ F++      ++ KNR +  FR QC+                  
Sbjct: 15   SCLLPQFKCQPDTFSIQFRT------HAQKNRETTYFRAQCL-----------------L 51

Query: 1911 EELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKL--PSLDAHPISIAENKPLAYVG 1738
                 S L +   +V                +LD+EKL  PSL+    S   N+P  Y G
Sbjct: 52   SATSPSTLSSAATAV----------------VLDMEKLRLPSLEVLTDSPTSNRPWTYTG 95

Query: 1737 AFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKP 1558
            A GPP+EVNLGA    ETLLTS                          A+M+ +  S+  
Sbjct: 96   AVGPPAEVNLGATLATETLLTSDEAVIAAAASEAVTLAKAALKSAKHAALMIRNESSSNI 155

Query: 1557 DSTTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDVEPSA 1378
            D+    +     TS+ + ++L  L    ++ E    E GL E N       +S+D+EP+ 
Sbjct: 156  DNKLE-LSSRTSTSLSKHAELLELEHSNILTELMEPEGGLREGNVMQYSTDKSEDLEPTH 214

Query: 1377 EELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDY 1198
            EEL+ L+ QL KSIAVRS+RQT              AN+               +Q+VDY
Sbjct: 215  EELQLLQVQLFKSIAVRSRRQTERKEIRERAAEKAAANVVSVKSGSLSKKKRAALQEVDY 274

Query: 1197 NDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAG 1018
            +DP                +EE  LSEGIQ LLKLERLQ ELTERCGG P F+QWAAAAG
Sbjct: 275  SDPLRYLRGTTSSSRLLTATEETELSEGIQDLLKLERLQVELTERCGGEPAFAQWAAAAG 334

Query: 1017 VDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 838
            VD +TLRK++NYG LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG EKF
Sbjct: 335  VDQKTLRKRLNYGRLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGCEKF 394

Query: 837  DATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPD 658
            DA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR PD
Sbjct: 395  DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPD 454

Query: 657  DEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQF 478
            +EEVAEATGLSMKRL+AV++TPKAPRSLDQKIGINQ+LKPS+VIADP AETSED+L+KQF
Sbjct: 455  NEEVAEATGLSMKRLNAVLMTPKAPRSLDQKIGINQNLKPSEVIADPNAETSEDVLLKQF 514

Query: 477  MKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLK 298
            M+QDL KVLD+LNPREKQVV+WRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLK
Sbjct: 515  MRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLK 574

Query: 297  NKKRTKHLQQYVM 259
            NKKRTKHLQQYV+
Sbjct: 575  NKKRTKHLQQYVL 587


>ref|XP_017977747.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Theobroma
            cacao]
          Length = 579

 Score =  639 bits (1648), Expect = 0.0
 Identities = 354/613 (57%), Positives = 417/613 (68%), Gaps = 1/613 (0%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MSCLLPQFKC PDTF++ F++      + SK++  I FRTQC+              +L+
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHS---HHSKHKEHICFRTQCVLSTTSSSTSTTATAVLD 57

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAYVGA 1735
             E+L+L                                 PS +AHP S+A ++P  Y+GA
Sbjct: 58   VEKLRL---------------------------------PSFEAHPNSVAVDRPWTYIGA 84

Query: 1734 FGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPD 1555
             GPPSE +LGA    + LLTS                          A+M  ++   K +
Sbjct: 85   TGPPSEASLGATLATDNLLTSDEAIIAAAAAEAVALARAAVKVAKDAALMAENYNYAKTE 144

Query: 1554 STTTGILPEVDTSMVEKSQLAHLAERV-VVREPKVAEIGLGEINPASDPLAESDDVEPSA 1378
              + G+    D S   K  L   AER  ++ +    E  + E +   +   ESD++EP+ 
Sbjct: 145  MKS-GVSFATD-SFTSKWALFTEAERAGIIGDSPTDESEMEEDDSEQNSTTESDELEPTN 202

Query: 1377 EELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDY 1198
            EELE LE QL++SIAVRS+RQT              AN+               +QDVDY
Sbjct: 203  EELERLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDVDY 262

Query: 1197 NDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAG 1018
            +DP                +EE  LSEGIQ LLKLERLQEEL ERCGG PTF+QWAAAAG
Sbjct: 263  SDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAG 322

Query: 1017 VDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 838
            VD +TLR ++NYG+ CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF
Sbjct: 323  VDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 382

Query: 837  DATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPD 658
            DA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR PD
Sbjct: 383  DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPD 442

Query: 657  DEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQF 478
            +EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIGINQ+LKPS+VIADPEAET+ED+LIKQF
Sbjct: 443  NEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDMLIKQF 502

Query: 477  MKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLK 298
            M++DL KVLDSL+ RE+QV++WRFG+EDGRMKTLQEIGELMGVSRERIRQIESCAFRKLK
Sbjct: 503  MRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLK 562

Query: 297  NKKRTKHLQQYVM 259
            NKKRTKHLQQY++
Sbjct: 563  NKKRTKHLQQYLL 575


>ref|XP_021283422.1| RNA polymerase sigma factor sigB [Herrania umbratica]
          Length = 579

 Score =  637 bits (1642), Expect = 0.0
 Identities = 349/613 (56%), Positives = 414/613 (67%), Gaps = 1/613 (0%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MSCLLPQFKC PDTF++ F++      + SK++  I FRTQC+              +L+
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHS---HHSKHKEHICFRTQCVLSTTSSSTSAMTTAVLD 57

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAYVGA 1735
             E+L+L                                 PS +AHP S+A ++P  Y+GA
Sbjct: 58   VEKLRL---------------------------------PSFEAHPNSVAADRPWTYIGA 84

Query: 1734 FGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPD 1555
             GPPSE +L A    E LLTS                          A+M  ++   K +
Sbjct: 85   TGPPSEASLAATLATENLLTSDEAVIAAAAAESVALARAAVKVAKDAALMAKNYNYAKTE 144

Query: 1554 STTTGILPEVDTSMVEKSQLAHLAERV-VVREPKVAEIGLGEINPASDPLAESDDVEPSA 1378
              + G+    DT    K  L   AER  ++ +    E  + E +   +   ESD++EP+ 
Sbjct: 145  MKS-GVSSATDT-FTSKWALFTEAERAGIIGDSPTDESEMEEDDSEQNATTESDELEPTN 202

Query: 1377 EELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDY 1198
            EELE LE QL++SI VRS+RQT               N+               +QDVDY
Sbjct: 203  EELELLEEQLSRSIIVRSRRQTERKAKRTRAAEKAAVNVVSVKSGSTNRKKRGALQDVDY 262

Query: 1197 NDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAG 1018
            +DP                +EE  LSEGIQ LLKLERLQEEL ERCGG PTF+QWAAAAG
Sbjct: 263  SDPLHYLRVTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAG 322

Query: 1017 VDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF 838
            VD +TLR ++NYG+LCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL+RGAEKF
Sbjct: 323  VDQKTLRSRLNYGVLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLIRGAEKF 382

Query: 837  DATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPD 658
            DA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EARK LYSENGR PD
Sbjct: 383  DASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKHLYSENGRHPD 442

Query: 657  DEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQF 478
            +EEVA+ATGLSMKRL+AV+LTPKAPRSLDQKIGINQ+LKPS+VIADPEAET+ED+LIKQF
Sbjct: 443  NEEVAKATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDMLIKQF 502

Query: 477  MKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLK 298
            M++DL KVLDSL+ RE+QV++WRFG+EDGRMKTLQEIGELMGVSRERIRQIESCAFRKLK
Sbjct: 503  MRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLK 562

Query: 297  NKKRTKHLQQYVM 259
            NKKRTKHLQQY++
Sbjct: 563  NKKRTKHLQQYLL 575


>gb|PHT35925.1| RNA polymerase sigma factor sigB [Capsicum baccatum]
          Length = 613

 Score =  638 bits (1645), Expect = 0.0
 Identities = 355/616 (57%), Positives = 414/616 (67%), Gaps = 5/616 (0%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MSCLLPQFKC PDTFA++FK+  H+     K R     RTQC+              +L+
Sbjct: 1    MSCLLPQFKCLPDTFALSFKTHQHSAPQILKGRDPFQLRTQCVLSTTSTVAAT----VLD 56

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLP--SLDAHPISIAENKPLAYV 1741
             E+L+L  +E + NS+ ADR           T++D++KL   S +AH  S+A   P  Y 
Sbjct: 57   IEKLQLPSIEVLSNSIAADRAWKPPSETATTTVVDIQKLKLQSFEAHSDSVAPESPWRYS 116

Query: 1740 GAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTK 1561
                  +EVN  A    E LLT                           AM+V HH S  
Sbjct: 117  EGVSLSNEVNTKAALATENLLTGEEAVIAAAAAEAVALAKAAVKVAKDAAMLVGHHNSKY 176

Query: 1560 PDSTTTGILPEVDTSMVEKSQLAHLAE---RVVVREPKVAEIGLGEINPASDPLAESDDV 1390
             D+T  G       +++++ +L    E     +V E KV E+     N + + L +S+D+
Sbjct: 177  SDNTVAGTPSTAGITLLDRVRLVQPCETGRNNIVGELKVREMRWSGSNSSGNSLMDSEDL 236

Query: 1389 EPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQ 1210
            E + +ELE L+A+L   IAVRSKRQ               AN+               VQ
Sbjct: 237  ERTHDELELLQAELLDRIAVRSKRQIERKARRARAAERAAANVVSVKSGSTGRKKRATVQ 296

Query: 1209 DVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWA 1030
            DVDY+DP                 EE  LS+GIQ LLKLERLQ+EL ERCG  PTF QWA
Sbjct: 297  DVDYSDPLHYLRGTSTSRLLTAS-EEHKLSDGIQDLLKLERLQDELAERCGEQPTFGQWA 355

Query: 1029 AAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 850
            AAAGVD +TLRK INYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG
Sbjct: 356  AAAGVDHKTLRKCINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 415

Query: 849  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 670
            AEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFH+VEATY+VKEARKQLYSENG
Sbjct: 416  AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHLVEATYKVKEARKQLYSENG 475

Query: 669  RLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLL 490
            R PD+EE+AEATGLSMKRLSAVMLTPKAPRSLDQKIG NQ+L+PS+VIADPEAETSE+ +
Sbjct: 476  RHPDEEEIAEATGLSMKRLSAVMLTPKAPRSLDQKIGFNQNLRPSEVIADPEAETSEETM 535

Query: 489  IKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 310
            IK FMKQDL KVLD+LNPRE+QV++WRFGLEDGRMKTL EIGELMGVSRERIRQIES AF
Sbjct: 536  IKHFMKQDLQKVLDTLNPRERQVIRWRFGLEDGRMKTLHEIGELMGVSRERIRQIESSAF 595

Query: 309  RKLKNKKRTKHLQQYV 262
            RKLKNKKRT+HLQQY+
Sbjct: 596  RKLKNKKRTRHLQQYI 611


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB [Solanum lycopersicum]
          Length = 613

 Score =  635 bits (1637), Expect = 0.0
 Identities = 359/615 (58%), Positives = 411/615 (66%), Gaps = 4/615 (0%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MS LLPQF   PD F +  K+Q    +  SK+R SI+ RTQCI             T+L 
Sbjct: 1    MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDSIHLRTQCILSTTSAVTSTATSTVLG 60

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTM-LDLEKLPSLDAHPISIAENKPLAYVG 1738
             E+L+L  +E + NSV A+R              +   KLPS +A+P S+A ++P  Y G
Sbjct: 61   IEKLQLPSIEILSNSVAAERSWKSPSAATTTVPGIQKLKLPSFEANPDSVAPDRPWTYTG 120

Query: 1737 AFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKP 1558
            A GPP+E    AN   E  L S                           M+V ++     
Sbjct: 121  AVGPPAE----ANTKPEDSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLKDS 176

Query: 1557 DSTTTGILPEVDTSMVEKSQLAHLAERV---VVREPKVAEIGLGEINPASDPLAESDDVE 1387
            D+   G L E  T+  E   LA   E     V  E   +E+     +   D L +SDD+E
Sbjct: 177  DNVGRGTLSEARTAPFESVHLAQPGETRGVGVCAELNGSEMKWTGSSLFRDTLTDSDDLE 236

Query: 1386 PSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQD 1207
            PS EELE L++QL+  IAV+S RQT              AN+               VQD
Sbjct: 237  PSHEELEILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKSGSTSRKKRASVQD 296

Query: 1206 VDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAA 1027
            VDY+DP                SEEQ LS GIQ LLKLERLQ ELTERCGG PTF+QWAA
Sbjct: 297  VDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWAA 356

Query: 1026 AAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 847
            AAGVD  TLRK++NYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGA
Sbjct: 357  AAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGA 416

Query: 846  EKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR 667
            EKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL +ENGR
Sbjct: 417  EKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLTENGR 476

Query: 666  LPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLI 487
             P+D EVAEATGLSMKRL+AVMLTPKAPRSLDQK+G N+ LKPS+V+ADP+AETSE++L 
Sbjct: 477  HPNDAEVAEATGLSMKRLAAVMLTPKAPRSLDQKVGFNESLKPSEVLADPDAETSEEILT 536

Query: 486  KQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR 307
            KQFM+QDL KVLD+LNPREKQVV+WRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR
Sbjct: 537  KQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR 596

Query: 306  KLKNKKRTKHLQQYV 262
            KLKNKKRTK LQQY+
Sbjct: 597  KLKNKKRTKFLQQYI 611


>ref|XP_017977746.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Theobroma
            cacao]
          Length = 586

 Score =  634 bits (1634), Expect = 0.0
 Identities = 355/620 (57%), Positives = 418/620 (67%), Gaps = 8/620 (1%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MSCLLPQFKC PDTF++ F++      + SK++  I FRTQC+              +L+
Sbjct: 1    MSCLLPQFKCQPDTFSIQFRTHHS---HHSKHKEHICFRTQCVLSTTSSSTSTTATAVLD 57

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAYVGA 1735
             E+L+L                                 PS +AHP S+A ++P  Y+GA
Sbjct: 58   VEKLRL---------------------------------PSFEAHPNSVAVDRPWTYIGA 84

Query: 1734 FGPPSEVNL-------GANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSH 1576
             GPPSEV+L       GA    + LLTS                          A+M  +
Sbjct: 85   TGPPSEVSLLRLRASLGATLATDNLLTSDEAIIAAAAAEAVALARAAVKVAKDAALMAEN 144

Query: 1575 HKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERV-VVREPKVAEIGLGEINPASDPLAES 1399
            +   K +  + G+    D S   K  L   AER  ++ +    E  + E +   +   ES
Sbjct: 145  YNYAKTEMKS-GVSFATD-SFTSKWALFTEAERAGIIGDSPTDESEMEEDDSEQNSTTES 202

Query: 1398 DDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXX 1219
            D++EP+ EELE LE QL++SIAVRS+RQT              AN+              
Sbjct: 203  DELEPTNEELERLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRG 262

Query: 1218 XVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFS 1039
             +QDVDY+DP                +EE  LSEGIQ LLKLERLQEEL ERCGG PTF+
Sbjct: 263  ALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFA 322

Query: 1038 QWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL 859
            QWAAAAGVD +TLR ++NYG+ CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL
Sbjct: 323  QWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL 382

Query: 858  VRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS 679
            VRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS
Sbjct: 383  VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS 442

Query: 678  ENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSE 499
            ENGR PD+EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIGINQ+LKPS+VIADPEAET+E
Sbjct: 443  ENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEVIADPEAETAE 502

Query: 498  DLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIES 319
            D+LIKQFM++DL KVLDSL+ RE+QV++WRFG+EDGRMKTLQEIGELMGVSRERIRQIES
Sbjct: 503  DMLIKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIES 562

Query: 318  CAFRKLKNKKRTKHLQQYVM 259
            CAFRKLKNKKRTKHLQQY++
Sbjct: 563  CAFRKLKNKKRTKHLQQYLL 582


>ref|XP_015061066.1| PREDICTED: RNA polymerase sigma factor sigB [Solanum pennellii]
          Length = 613

 Score =  634 bits (1635), Expect = 0.0
 Identities = 359/616 (58%), Positives = 414/616 (67%), Gaps = 5/616 (0%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MS LLPQF   PD F +  K+Q    +  SK+R +I+ RTQCI             T+L 
Sbjct: 1    MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDNIHLRTQCILSTTSAVTSTATSTVLG 60

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKL--PSLDAHPISIAENKPLAYV 1741
             E+L+L  +E + NSV A+R            + D++KL  PS +A+P S+A ++P  Y 
Sbjct: 61   IEKLQLPSIEILSNSVAAERSWKSTSAATTT-VPDIQKLKLPSFEANPDSVAPDRPWTYT 119

Query: 1740 GAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTK 1561
            GA GPP+E    AN   E  L S                           M+V ++    
Sbjct: 120  GAVGPPAE----ANTKPEDSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLKD 175

Query: 1560 PDSTTTGILPEVDTSMVEKSQLAHLAERV---VVREPKVAEIGLGEINPASDPLAESDDV 1390
             D+   G L E  T+  E   LA   E     V  E   +E+     +   D L +SDD+
Sbjct: 176  SDNVGRGTLSEARTAPFESVHLAQPGETRGVGVCAELNGSEMKWTGSSLFRDTLTDSDDL 235

Query: 1389 EPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQ 1210
            EPS EELE L++QL+  IAV+S RQT              AN+               VQ
Sbjct: 236  EPSHEELEILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKSGSTSRKKRASVQ 295

Query: 1209 DVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWA 1030
            DVDY+DP                SEEQ LS GIQ LLKLERLQ ELTERCGG PTF+QWA
Sbjct: 296  DVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWA 355

Query: 1029 AAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 850
            AAAGVD  TLRK++NYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRG
Sbjct: 356  AAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRG 415

Query: 849  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 670
            AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQL +ENG
Sbjct: 416  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLTENG 475

Query: 669  RLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLL 490
            R P+D EVAEATGLSMKRL+AVMLTPKAPRSLDQK+G N+ LKPS+V+ADP+AETSE++L
Sbjct: 476  RHPNDAEVAEATGLSMKRLAAVMLTPKAPRSLDQKVGFNESLKPSEVLADPDAETSEEIL 535

Query: 489  IKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 310
             KQFM+QDL KVLD+LNPREKQVV+WRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 536  TKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 595

Query: 309  RKLKNKKRTKHLQQYV 262
            RKLKNKKRTK LQQY+
Sbjct: 596  RKLKNKKRTKFLQQYI 611


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB [Solanum tuberosum]
          Length = 613

 Score =  631 bits (1627), Expect = 0.0
 Identities = 360/616 (58%), Positives = 413/616 (67%), Gaps = 5/616 (0%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MS LLPQF   PD F +  K+Q    +  SK+R  I+ RTQCI             T+L 
Sbjct: 1    MSYLLPQFLSLPDAFVICAKTQQQTTIQLSKSRDHIHLRTQCILSTTSAVTSTATSTVLG 60

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKL--PSLDAHPISIAENKPLAYV 1741
             E+L+L  +E + NSV A+R            + D++KL  PS +A+P S+A ++P  Y 
Sbjct: 61   IEKLQLPSIEILSNSVAAERSWKSPSAATTT-VPDIQKLKLPSFEANPDSVAPDRPWTYT 119

Query: 1740 GAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTK 1561
            GA GPP+E    AN   E  L S                           M+V ++    
Sbjct: 120  GAVGPPAE----ANTKPENSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNNLND 175

Query: 1560 PDSTTTGILPEVDTSMVEKSQLAHLAE--RV-VVREPKVAEIGLGEINPASDPLAESDDV 1390
             D+   G L E  T+  E   LA   E  RV V  E   +E+     +   + L +SDD+
Sbjct: 176  SDNVGRGTLSEARTAPFESVHLAQPGETRRVGVCAELNGSEMKWTGSSLFRETLTDSDDL 235

Query: 1389 EPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQ 1210
            EPS EELE L++QL+  IAV+S RQT              AN+               VQ
Sbjct: 236  EPSPEELEILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKSGSTSRKKRASVQ 295

Query: 1209 DVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWA 1030
            DVDY+DP                SEEQ LS GIQ LLKLERLQ ELTERCGG PTF+QWA
Sbjct: 296  DVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTFTQWA 355

Query: 1029 AAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 850
            AAAGVD  TLRK++NYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRG
Sbjct: 356  AAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRG 415

Query: 849  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 670
            AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSR IRLPFHMVEATYRVKEARKQL +ENG
Sbjct: 416  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLLTENG 475

Query: 669  RLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLL 490
            R P+D EVAEA GLSMKRL+AVMLTPKAPRSLDQKIG N+ LKPS+V+ADPEAETSE++L
Sbjct: 476  RHPNDAEVAEAAGLSMKRLAAVMLTPKAPRSLDQKIGFNESLKPSEVLADPEAETSEEIL 535

Query: 489  IKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 310
             KQFM+QDL KVLD+LNPREKQVV+WRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF
Sbjct: 536  TKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 595

Query: 309  RKLKNKKRTKHLQQYV 262
            RKLKNKKRTK LQQY+
Sbjct: 596  RKLKNKKRTKFLQQYI 611


>ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB [Ziziphus jujuba]
          Length = 573

 Score =  629 bits (1621), Expect = 0.0
 Identities = 351/615 (57%), Positives = 418/615 (67%), Gaps = 3/615 (0%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLE 1915
            MSCLLPQFKC PDTF+++F++      +  K R SI+    CI             T+L 
Sbjct: 1    MSCLLPQFKCQPDTFSIHFRT------HLPKPRDSISSWPHCILSTSSPSTSMATTTVLN 54

Query: 1914 FEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAYVGA 1735
             E+L+L                                 PSLDA+  S+  N+P  Y GA
Sbjct: 55   LEKLRL---------------------------------PSLDANSDSVTANRPWTYTGA 81

Query: 1734 FGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPD 1555
             GPP++ NL A    ETLLTS                           ++++++  T+ +
Sbjct: 82   IGPPAKANLEATLATETLLTSEEAVIAAAAAEAVTLAKAAVKVAKDATLLINNNPCTRAE 141

Query: 1554 STTTGILPEVDTSMVEKSQLAHLAERVVVRE---PKVAEIGLGEINPASDPLAESDDVEP 1384
            ST+    PE D   ++  Q     + V + +   PK A++    +  A   + E+DD+EP
Sbjct: 142  STSL-FSPEDDALHLKWPQHMKTGQPVRLGDSMGPKTAQLDDYSMQCA---IKEADDLEP 197

Query: 1383 SAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDV 1204
            + EELE L++QL+  IAVRS+RQT              A +               +QD+
Sbjct: 198  THEELELLQSQLSNGIAVRSRRQTERKARRTRAAEKAAATVVSVKSGSTVRKKRASLQDI 257

Query: 1203 DYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAA 1024
            D++DP                +EE  LSEGIQ LLKLE+LQEELTERCG  PTF+QWAAA
Sbjct: 258  DHSDPLRYLRATTSTSRLLTATEEIELSEGIQDLLKLEKLQEELTERCGSQPTFAQWAAA 317

Query: 1023 AGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 844
            AGVD +TLR++INYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE
Sbjct: 318  AGVDQKTLRRRINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 377

Query: 843  KFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRL 664
            KFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS+NGR 
Sbjct: 378  KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSKNGRH 437

Query: 663  PDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIK 484
            PDDEEVAEATGLSMKRL+AV+LTPKAPRSL+QKIGINQ+LKPS+VIADP+AETSED+LI+
Sbjct: 438  PDDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEVIADPDAETSEDVLIR 497

Query: 483  QFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRK 304
            +FMKQDL KVLDSLNPREKQV++WRFG+EDGRMKTLQEIGELMGVSRERIRQIESCAFRK
Sbjct: 498  KFMKQDLDKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRK 557

Query: 303  LKNKKRTKHLQQYVM 259
            LKNKKRTKHLQQY++
Sbjct: 558  LKNKKRTKHLQQYLV 572


>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
          Length = 572

 Score =  627 bits (1618), Expect = 0.0
 Identities = 354/616 (57%), Positives = 415/616 (67%), Gaps = 4/616 (0%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKSQSHA--FVNSS--KNRVSINFRTQCIXXXXXXXXXXXXX 1927
            M+CLLPQFKCSPDT +++FK+  H   + N+S  K R  + FRTQCI             
Sbjct: 1    MACLLPQFKCSPDTLSIHFKTHQHQHHYSNNSQLKARDLLCFRTQCI------------- 47

Query: 1926 TMLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLA 1747
                     LS   A   +   D                  ++PSL+AH IS+  ++PL 
Sbjct: 48   ---------LSTTTATMTTTVVDDEKL--------------RMPSLEAHLISVPADRPLT 84

Query: 1746 YVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKS 1567
            Y+GA  PP++    A    E L+T                           A+MVS + S
Sbjct: 85   YIGAIDPPTKAKFEATLATEPLITGDEALIAAAAVEAVALAKAAVEIAKDAALMVSTNPS 144

Query: 1566 TKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDVE 1387
            +K D     I  E+DT   E +QL  + +  +V     AE         S P  +SD ++
Sbjct: 145  SKSDKWPPDIPSELDTYWHETAQLNEIEQVDMVHHSLGAE---------SRPKEDSDYLD 195

Query: 1386 PSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQD 1207
            P+ EEL+ L+ QL+KSIAVRS RQT              AN+               +QD
Sbjct: 196  PTDEELKLLQMQLSKSIAVRSGRQTERRARRARAAEKVAANVVAVKSGSSSRKKRSALQD 255

Query: 1206 VDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAA 1027
            VDY+DP                +EE   SEGIQ LLKLE+L EEL ER GG PTF+QWAA
Sbjct: 256  VDYSDPLRYLRGTTSTSRLLTATEELEFSEGIQDLLKLEKLYEELAERYGGQPTFAQWAA 315

Query: 1026 AAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 847
            AAG+D +TLRK++NYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA
Sbjct: 316  AAGIDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGA 375

Query: 846  EKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR 667
            EKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRV+EARKQLYSENGR
Sbjct: 376  EKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVREARKQLYSENGR 435

Query: 666  LPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLI 487
             PD+EEVAEATGLSMKRL+AV+LTPKAPRSLDQKIGINQ+LKPS+VIADP+AET+E+LL+
Sbjct: 436  HPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETTEELLM 495

Query: 486  KQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR 307
            K+FMKQDL KVLDSLNPREKQV++WRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR
Sbjct: 496  KKFMKQDLEKVLDSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFR 555

Query: 306  KLKNKKRTKHLQQYVM 259
            KLKNKKRTK+LQQY++
Sbjct: 556  KLKNKKRTKNLQQYLI 571


>ref|XP_012070322.1| RNA polymerase sigma factor sigB [Jatropha curcas]
 gb|KDP39610.1| hypothetical protein JCGZ_02630 [Jatropha curcas]
          Length = 577

 Score =  627 bits (1616), Expect = 0.0
 Identities = 350/617 (56%), Positives = 408/617 (66%), Gaps = 5/617 (0%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKS---QSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXT 1924
            MSCLLPQFKC PDTF+++F++   Q+  F  S+K+R  + FR QCI              
Sbjct: 1    MSCLLPQFKCQPDTFSIHFRTHYLQNSNFCQSAKSREPVCFRAQCILSTTS--------- 51

Query: 1923 MLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKL--PSLDAHPISIAENKPL 1750
                           P++  A              +LDLEKL  PS +AHP S+  N P 
Sbjct: 52   ---------------PSTSTA--------------VLDLEKLRLPSFEAHPDSLVANSPW 82

Query: 1749 AYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHK 1570
             YVG+ GPP E   G+    ETL+T                           A++V    
Sbjct: 83   TYVGSIGPPKET-FGSTLATETLITGDDAVIAAAAAEAVALARAAAKVAKDAAILVKSFP 141

Query: 1569 STKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDV 1390
            S++ +S     +P +        Q        ++ +   AE G  E +P   P  ESD +
Sbjct: 142  SSEAESKLE--IPSIADVSSRWPQFTETDRARIIGDSVTAETGSREEHPMQHPTKESDHL 199

Query: 1389 EPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQ 1210
            EP+ EELE L+ QL++ IAVRS+RQT              AN+               +Q
Sbjct: 200  EPTHEELELLQKQLSEGIAVRSRRQTERKERRTRAAEKAAANVMSWKSGSTSKKKRGPLQ 259

Query: 1209 DVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWA 1030
            +VDY+DP                +EE  LSEGIQ LLKLERL EEL ERCGG PTF QWA
Sbjct: 260  EVDYSDPLRYLRGTTSTSKLLTATEELELSEGIQDLLKLERLHEELAERCGGQPTFQQWA 319

Query: 1029 AAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 850
            AAAGVD +TLR ++NYGI CKD+MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG
Sbjct: 320  AAAGVDQKTLRTRLNYGISCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRG 379

Query: 849  AEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 670
            AEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG
Sbjct: 380  AEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENG 439

Query: 669  RLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLL 490
            R PDDEEVAEATGLSMKRLSAV+LTPKAPRSLDQKIGIN DLKPS++IADP+AET+EDLL
Sbjct: 440  RYPDDEEVAEATGLSMKRLSAVLLTPKAPRSLDQKIGINMDLKPSEIIADPDAETAEDLL 499

Query: 489  IKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAF 310
            +KQFMKQDL KVLDSL+PRE QV++WRFGLEDGR+KTLQEIGE+MGVSRERIRQIES AF
Sbjct: 500  MKQFMKQDLEKVLDSLSPRENQVIRWRFGLEDGRIKTLQEIGEIMGVSRERIRQIESSAF 559

Query: 309  RKLKNKKRTKHLQQYVM 259
            RKLK KKRTK L+QY++
Sbjct: 560  RKLKKKKRTKQLKQYLV 576


>gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sinensis]
          Length = 605

 Score =  627 bits (1617), Expect = 0.0
 Identities = 352/615 (57%), Positives = 411/615 (66%), Gaps = 3/615 (0%)
 Frame = -2

Query: 2094 MSCLLPQFKCSPDTFAVNFKS---QSHAFVNSSKNRVSINFRTQCIXXXXXXXXXXXXXT 1924
            MSCLLPQFKC PDTF+++F++     H   + SK++  I FRT C+             T
Sbjct: 24   MSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTAMTT 83

Query: 1923 MLEFEELKLSPLEAIPNSVPADRXXXXXXXXXXXTMLDLEKLPSLDAHPISIAENKPLAY 1744
            +L+ E+L+L                                 PSL+AH  ++A N+   Y
Sbjct: 84   VLDVEKLRL---------------------------------PSLEAHSNAVAANRQWTY 110

Query: 1743 VGAFGPPSEVNLGANFDKETLLTSXXXXXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKST 1564
             GA GP +E NLG +   ETL TS                          A+MV+HH S 
Sbjct: 111  FGAVGPSTEENLGTSLATETL-TSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHNSA 169

Query: 1563 KPDSTTTGILPEVDTSMVEKSQLAHLAERVVVREPKVAEIGLGEINPASDPLAESDDVEP 1384
            KP S    I    DT+    +QL       ++ +  + E    E      PL +S D+EP
Sbjct: 170  KPKSKPA-ISSSADTNTSMWAQLTERERASIIGDSVIVEAAPEEEYSEQQPLNKSADLEP 228

Query: 1383 SAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDV 1204
            + EEL+ LE Q+++SIAVRS+RQT              AN+               VQ+V
Sbjct: 229  THEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEV 288

Query: 1203 DYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAA 1024
            DY+DP                +EE  LS GIQ LLKLE L+E L+ERCGG PTF+QWAAA
Sbjct: 289  DYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAA 348

Query: 1023 AGVDLRTLRKQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 844
            AGVD R LR+++NYGILCKDKMI SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE
Sbjct: 349  AGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 408

Query: 843  KFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRL 664
            KFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGR 
Sbjct: 409  KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRH 468

Query: 663  PDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIK 484
            P++EEVAEATGLSMKRL AV+L+PKAPRSLDQKIGINQ+LKPS+VIADPEAET+EDLLIK
Sbjct: 469  PNNEEVAEATGLSMKRLHAVLLSPKAPRSLDQKIGINQNLKPSEVIADPEAETAEDLLIK 528

Query: 483  QFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRK 304
            +FMK+DL KVLD+LNPRE+QVV+WRFGLEDGRMKTLQEIGELMGVSRERIRQIES AFRK
Sbjct: 529  KFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRK 588

Query: 303  LKNKKRTKHLQQYVM 259
            LKNKKRTKHL QY +
Sbjct: 589  LKNKKRTKHLMQYAI 603