BLASTX nr result

ID: Rehmannia31_contig00007116 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00007116
         (639 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_016542632.1| PREDICTED: serine/arginine-rich splicing fac...    71   8e-11
gb|PIN08036.1| hypothetical protein CDL12_19381 [Handroanthus im...    57   1e-07
ref|XP_022888617.1| serine/arginine-rich splicing factor RS2Z32-...    60   4e-07
ref|XP_022888616.1| serine/arginine-rich splicing factor RS2Z33-...    60   4e-07

>ref|XP_016542632.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
           X1 [Capsicum annuum]
          Length = 338

 Score = 70.9 bits (172), Expect = 8e-11
 Identities = 42/76 (55%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
 Frame = -3

Query: 214 SWQLLEVFGDPFYVVFACFLEFSTIKLVFSSSWAT-----KFHELQYVSSYDGLTVSDNH 50
           S  +L  FG PFY VFA F    TI     S+W       + HEL  + S DGLTVS NH
Sbjct: 6   SCPVLGDFGGPFYNVFAYFYGIPTI-----SNWCIVHLEGQIHELPVLISNDGLTVSGNH 60

Query: 49  FRRVRDVDMKRDYAFV 2
           FRRVRDVDMK DYAFV
Sbjct: 61  FRRVRDVDMKHDYAFV 76


>gb|PIN08036.1| hypothetical protein CDL12_19381 [Handroanthus impetiginosus]
          Length = 69

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = -1

Query: 288 LVSMVGGWTLPDLVVNGERVDSVEFLGNC 202
           L  MVGGWTLPDLVVNGERVD VEFLGNC
Sbjct: 41  LCLMVGGWTLPDLVVNGERVDLVEFLGNC 69


>ref|XP_022888617.1| serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Olea
          europaea var. sylvestris]
          Length = 292

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = -3

Query: 94 QYVSSYDGLTVSDNHFRRVRDVDMKRDYAFV 2
          QYV SYD LTVS NHFRRVRDVDMKRDYAFV
Sbjct: 4  QYVVSYDALTVSGNHFRRVRDVDMKRDYAFV 34


>ref|XP_022888616.1| serine/arginine-rich splicing factor RS2Z33-like isoform X1 [Olea
          europaea var. sylvestris]
          Length = 293

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = -3

Query: 94 QYVSSYDGLTVSDNHFRRVRDVDMKRDYAFV 2
          QYV SYD LTVS NHFRRVRDVDMKRDYAFV
Sbjct: 4  QYVVSYDALTVSGNHFRRVRDVDMKRDYAFV 34


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