BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00006358
         (683 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN11781.1| RNA binding protein (contains RRM repeats) [Handr...    52   5e-08
gb|KZN06830.1| hypothetical protein DCAR_007667 [Daucus carota s...    56   5e-07

>gb|PIN11781.1| RNA binding protein (contains RRM repeats) [Handroanthus
           impetiginosus]
          Length = 316

 Score = 52.0 bits (123), Expect(2) = 5e-08
 Identities = 24/41 (58%), Positives = 28/41 (68%)
 Frame = +3

Query: 3   FEESIWEKERLHPPSCCLTCEWSTTTNDLPLAGWGCILFSM 125
           F+ES+ EKE    PS C  CEWS+  NDLP+AG GCIL  M
Sbjct: 252 FKESVREKEGFDLPSRCPRCEWSSAFNDLPVAGRGCILLLM 292



 Score = 33.5 bits (75), Expect(2) = 5e-08
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +1

Query: 139 KALHDRMHHAALACI 183
           +ALHDRMHHAA+ACI
Sbjct: 294 QALHDRMHHAAVACI 308


>gb|KZN06830.1| hypothetical protein DCAR_007667 [Daucus carota subsp. sativus]
          Length = 84

 Score = 56.2 bits (134), Expect = 5e-07
 Identities = 34/62 (54%), Positives = 39/62 (62%)
 Frame = -2

Query: 187 NGCMQELHDASYHVVLCICQSIENRIHPHPASGRSLVVVLHSHVRQQLGG*SLSFSQMDS 8
           N CM         VV+CI  SIENR+HP PA+GRS VV LHS +  Q  G +LSFSQM S
Sbjct: 5   NSCMMH----PIKVVVCIDHSIENRVHPLPATGRSRVVELHSGLGPQ-SGQNLSFSQMGS 59

Query: 7   SN 2
            N
Sbjct: 60  LN 61