BLASTX nr result

ID: Rehmannia31_contig00006346 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00006346
         (464 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN06083.1| hypothetical protein CDL12_21374 [Handroanthus im...    77   8e-15

>gb|PIN06083.1| hypothetical protein CDL12_21374 [Handroanthus impetiginosus]
          Length = 161

 Score = 77.0 bits (188), Expect = 8e-15
 Identities = 61/158 (38%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
 Frame = -3

Query: 462 WKQKTNYN--QKPSLIRSKLANEPCKKHPKHTQSPGVCSICXXXXXXXXXXXXXXXXXXX 289
           WK + NY+  QKPS  R K ANEPCKKHPKHTQSPGVCSIC                   
Sbjct: 4   WKTRINYSNYQKPSG-RFK-ANEPCKKHPKHTQSPGVCSICLGEKLSRLTNSSVSKPARS 61

Query: 288 XXXXXXXXXXXXXXXXXXXXXXXSPNIKSNMRVFRKNDTISSGQEMFMKKSRSMANFAL- 112
                                    N       F KN    SGQ++ ++KSRS A  +  
Sbjct: 62  SLSSSSSSSDISPLSSSSSSYSSPVNYHRKSTRFFKN----SGQDV-LQKSRSTAFVSYM 116

Query: 111 --QXXXXXXXXXXXXRGFWSKLLPRKNKKLMHSRTTRE 4
             +            RGFWSKLL RKNK++ HSRT RE
Sbjct: 117 RRKNEDENGKKVDAKRGFWSKLLLRKNKRMTHSRTMRE 154


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