BLASTX nr result

ID: Rehmannia31_contig00006277 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00006277
         (703 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011069503.1| zinc finger CCCH domain-containing protein 2...    70   3e-11
ref|XP_011102209.1| zinc finger CCCH domain-containing protein 2...    70   2e-10
gb|PIM99748.1| putative RNA-binding protein (RRM superfamily) [H...    59   1e-06

>ref|XP_011069503.1| zinc finger CCCH domain-containing protein 25-like, partial
           [Sesamum indicum]
          Length = 185

 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
 Frame = +2

Query: 8   GLNTEDYERRVVKKQWEEKDNVTKHKDVHDXXXXXXXXXXXXXYTEQNSREERDWRNEKR 187
           G N +D++RR  KKQ E+KD+++KHK+ HD             YTE NSREER   NEKR
Sbjct: 89  GSNAKDHDRRDAKKQPEQKDHISKHKEFHDSSSTNKRSRES--YTEPNSREERHRGNEKR 146

Query: 188 SRKYESESY-REDKY 229
           SR Y++E Y RE KY
Sbjct: 147 SRNYDTEPYRREHKY 161


>ref|XP_011102209.1| zinc finger CCCH domain-containing protein 25-like [Sesamum
           indicum]
 ref|XP_020547276.1| zinc finger CCCH domain-containing protein 25-like [Sesamum
           indicum]
 ref|XP_020547277.1| zinc finger CCCH domain-containing protein 25-like [Sesamum
           indicum]
 ref|XP_020547278.1| zinc finger CCCH domain-containing protein 25-like [Sesamum
           indicum]
          Length = 326

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
 Frame = +2

Query: 8   GLNTEDYERRVVKKQWEEKDNVTKHKDVHDXXXXXXXXXXXXXYTEQNSREERDWRNEKR 187
           G N +D++RR  KKQ E+KD+++KHK+ HD             YTE NSREER   NEKR
Sbjct: 230 GSNAKDHDRRDAKKQPEQKDHISKHKEFHDSSSTNKRSRES--YTEPNSREERHRGNEKR 287

Query: 188 SRKYESESY-REDKY 229
           SR Y++E Y RE KY
Sbjct: 288 SRNYDTEPYRREHKY 302


>gb|PIM99748.1| putative RNA-binding protein (RRM superfamily) [Handroanthus
           impetiginosus]
          Length = 311

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
 Frame = +2

Query: 8   GLNTEDYERRVVKKQWEEKDNVTKHKDVHDXXXXXXXXXXXXXYTEQNSREERDWRNEKR 187
           G + +D+ERRVVK +   KD+VTK +D+H                E + REERD  +EKR
Sbjct: 213 GSSAKDHERRVVKTK---KDDVTKDRDIH-----YSPSSHRRSRPEPSFREERDRMDEKR 264

Query: 188 SRKYESESY--REDKY 229
           SRKYE ESY  REDKY
Sbjct: 265 SRKYEPESYHSREDKY 280


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