BLASTX nr result
ID: Rehmannia31_contig00004936
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00004936
(433 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PON85141.1| Ribonuclease H-like domain containing protein [Tr... 73 2e-13
gb|OVA10817.1| Ribonuclease H domain [Macleaya cordata] 69 8e-11
gb|PON47283.1| Ribonuclease H, partial [Parasponia andersonii] 67 1e-10
gb|POO00367.1| Ribonuclease H-like domain containing protein [Tr... 62 7e-10
gb|PON59171.1| hypothetical protein PanWU01x14_160980, partial [... 61 3e-09
gb|PON49250.1| Ribonuclease H [Parasponia andersonii] 60 2e-08
ref|XP_024164007.1| uncharacterized protein LOC112170981 [Rosa c... 62 3e-08
gb|PRQ16567.1| putative ribonuclease H-like domain-containing pr... 61 3e-08
ref|XP_019431738.1| PREDICTED: uncharacterized protein LOC109338... 62 3e-08
gb|PRQ43167.1| putative ribonuclease H-like domain-containing pr... 61 4e-08
gb|PON88596.1| Ribonuclease H-like domain containing protein [Tr... 61 4e-08
gb|PON43417.1| Ribonuclease H, partial [Parasponia andersonii] 60 6e-08
ref|XP_017190741.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR... 61 6e-08
ref|XP_019451747.1| PREDICTED: uncharacterized protein LOC109353... 61 6e-08
ref|XP_024190007.1| uncharacterized protein LOC112193973 [Rosa c... 61 6e-08
gb|PRQ42072.1| putative RNA-directed DNA polymerase [Rosa chinen... 61 6e-08
gb|PRQ52889.1| putative RNA-directed DNA polymerase [Rosa chinen... 61 6e-08
gb|PON81274.1| hypothetical protein TorRG33x02_229060, partial [... 59 1e-07
dbj|GAU30382.1| hypothetical protein TSUD_57940 [Trifolium subte... 58 1e-07
dbj|GAU50508.1| hypothetical protein TSUD_234280 [Trifolium subt... 59 2e-07
>gb|PON85141.1| Ribonuclease H-like domain containing protein [Trema orientalis]
Length = 147
Score = 72.8 bits (177), Expect = 2e-13
Identities = 40/95 (42%), Positives = 48/95 (50%)
Frame = -2
Query: 324 MNNGQADLFRLRRLRVPGHPRKAPSIIQVDWHPPLPCWTKVIIDGNAQGSPGRSMAAXXX 145
MNN Q DL LRRL +P P+KAP II + W P L W KVI+DG+AQ PG +
Sbjct: 1 MNNSQHDLVILRRLSLPCRPKKAPRIISIHWFPLLSGWVKVIVDGSAQVQPGVISSGGVF 60
Query: 144 XXXXXXXXXXXVESCGIGYVFEVELVAAMTEIHYA 40
GI + FE EL+ AM I A
Sbjct: 61 RNSRGFVLGCFASKIGIRFSFEAELLGAMIAIECA 95
>gb|OVA10817.1| Ribonuclease H domain [Macleaya cordata]
Length = 432
Score = 68.9 bits (167), Expect = 8e-11
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = -2
Query: 408 FNDKTWTVEAATQL-RVLIVESSTLDKGCMNNGQADLFRLRRLRVPGHPRKAPSIIQVDW 232
FN+K + AAT + + + L KG M N +DLF LR R+ PR+APSIIQV+W
Sbjct: 273 FNNKVISPLAATHMISSFVSKGGILGKGVMKNNLSDLFILRHFRLAARPRRAPSIIQVNW 332
Query: 231 HPPLPCWTKVIIDGNAQGSPGRS 163
PL W K+ +G++ G+PG S
Sbjct: 333 ALPLAGWIKINTNGSSHGNPGLS 355
>gb|PON47283.1| Ribonuclease H, partial [Parasponia andersonii]
Length = 204
Score = 66.6 bits (161), Expect = 1e-10
Identities = 40/108 (37%), Positives = 50/108 (46%)
Frame = -2
Query: 351 ESSTLDKGCMNNGQADLFRLRRLRVPGHPRKAPSIIQVDWHPPLPCWTKVIIDGNAQGSP 172
E+ +L G M N DL LR LRV G RK P II+V W PP W KV DG+ GS
Sbjct: 1 EAESLISGTMFNSMNDLLILRELRVKGKSRKVPIIIEVIWRPPPLSWIKVNTDGSTYGSS 60
Query: 171 GRSMAAXXXXXXXXXXXXXXVESCGIGYVFEVELVAAMTEIHYAFNQG 28
G + G Y FE +L AA+ I++A+ G
Sbjct: 61 GSYGYSGVFQTHRGFIRGCFSILLGTSYAFEAKLTAAIYAINFAWKYG 108
>gb|POO00367.1| Ribonuclease H-like domain containing protein [Trema orientalis]
Length = 91
Score = 62.0 bits (149), Expect = 7e-10
Identities = 36/89 (40%), Positives = 45/89 (50%)
Frame = -2
Query: 306 DLFRLRRLRVPGHPRKAPSIIQVDWHPPLPCWTKVIIDGNAQGSPGRSMAAXXXXXXXXX 127
+L LR L + G PRKA +II V W PP W KV IDG+A G+PG S +
Sbjct: 3 ELMILRVLHIRGWPRKAHNIIAVVWRPPPHSWIKVNIDGSAFGAPGLSRCSWVFRTHRGF 62
Query: 126 XXXXXVESCGIGYVFEVELVAAMTEIHYA 40
G+GY F EL AA+ I +A
Sbjct: 63 VHDYFSIFLGVGYAFVSELAAAIHAIDFA 91
>gb|PON59171.1| hypothetical protein PanWU01x14_160980, partial [Parasponia
andersonii]
Length = 128
Score = 61.2 bits (147), Expect = 3e-09
Identities = 29/52 (55%), Positives = 33/52 (63%)
Frame = -2
Query: 324 MNNGQADLFRLRRLRVPGHPRKAPSIIQVDWHPPLPCWTKVIIDGNAQGSPG 169
MNN Q DL L R +P P+K P II V W PPL W KV +DG+AQG PG
Sbjct: 44 MNNSQHDLVILCRPSLPYRPKKTPRIISVHWFPPLLGWVKVNVDGSAQGKPG 95
>gb|PON49250.1| Ribonuclease H [Parasponia andersonii]
Length = 144
Score = 59.7 bits (143), Expect = 2e-08
Identities = 37/110 (33%), Positives = 49/110 (44%)
Frame = -2
Query: 357 IVESSTLDKGCMNNGQADLFRLRRLRVPGHPRKAPSIIQVDWHPPLPCWTKVIIDGNAQG 178
I ES + G + N +L L+ L + P KAP I++V W PL W K+ IDG A G
Sbjct: 10 IGESYNVGSGTIRNSLKELGILKCLNIKLKPSKAPKIVEVFWQVPLVGWLKINIDGAAYG 69
Query: 177 SPGRSMAAXXXXXXXXXXXXXXVESCGIGYVFEVELVAAMTEIHYAFNQG 28
PG + S Y FE EL A + I YA++ G
Sbjct: 70 CPGLAGYGGIFRISRGFFKRGFAISISKAYAFEAELAAVIHAIFYAWDLG 119
>ref|XP_024164007.1| uncharacterized protein LOC112170981 [Rosa chinensis]
Length = 1205
Score = 62.0 bits (149), Expect = 3e-08
Identities = 36/99 (36%), Positives = 46/99 (46%)
Frame = -2
Query: 324 MNNGQADLFRLRRLRVPGHPRKAPSIIQVDWHPPLPCWTKVIIDGNAQGSPGRSMAAXXX 145
+++G D L L V PRKAP I +V WHPPLP W KV DG A+G+PG +
Sbjct: 1008 IDSGVLDSRLLSSLGVCPKPRKAPKIQRVLWHPPLPPWVKVNTDGLAKGNPGPAACGGVF 1067
Query: 144 XXXXXXXXXXXVESCGIGYVFEVELVAAMTEIHYAFNQG 28
+ G F EL A + I AF +G
Sbjct: 1068 RDASGVYLGSFCQPLGCNSSFYAELYAVIVSIEVAFTRG 1106
>gb|PRQ16567.1| putative ribonuclease H-like domain-containing protein [Rosa
chinensis]
Length = 237
Score = 60.8 bits (146), Expect = 3e-08
Identities = 36/96 (37%), Positives = 43/96 (44%)
Frame = -2
Query: 315 GQADLFRLRRLRVPGHPRKAPSIIQVDWHPPLPCWTKVIIDGNAQGSPGRSMAAXXXXXX 136
G D L L V PRKAP I +V WHPPLP W KV DG A+G+PG +
Sbjct: 43 GVLDSRLLSSLGVCPKPRKAPKIQRVLWHPPLPPWVKVNTDGLAKGNPGPAACGGVFRDA 102
Query: 135 XXXXXXXXVESCGIGYVFEVELVAAMTEIHYAFNQG 28
+ G F EL A + I AF +G
Sbjct: 103 SGVYLGSFCQPLGCNSSFYAELYAVIVSIEVAFTRG 138
>ref|XP_019431738.1| PREDICTED: uncharacterized protein LOC109338847 [Lupinus
angustifolius]
Length = 863
Score = 61.6 bits (148), Expect = 3e-08
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = -2
Query: 393 WT--VEAATQLRVLIVESSTLDKGCMNNGQADLFRLRRLRVPGHPRKAPSIIQVDWHPPL 220
WT A +++++ I S + K C N Q D LR L V H AP+II+V W+ PL
Sbjct: 780 WTSVAMAKSRIKMAIFLSGNISKLCANGSQQDFTILRNLNVSPHYNCAPAIIEVLWYNPL 839
Query: 219 PCWTKVIIDGNAQGSPGRS 163
P W K+ DG A G+PG +
Sbjct: 840 PGWIKINSDGAAHGAPGHA 858
>gb|PRQ43167.1| putative ribonuclease H-like domain-containing protein [Rosa
chinensis]
Length = 284
Score = 60.8 bits (146), Expect = 4e-08
Identities = 36/96 (37%), Positives = 43/96 (44%)
Frame = -2
Query: 315 GQADLFRLRRLRVPGHPRKAPSIIQVDWHPPLPCWTKVIIDGNAQGSPGRSMAAXXXXXX 136
G D L L V PRKAP I +V WHPPLP W KV DG A+G+PG +
Sbjct: 43 GVLDSRLLSSLGVCPKPRKAPKIQRVLWHPPLPPWVKVNTDGLAKGNPGPAACGGVFRDA 102
Query: 135 XXXXXXXXVESCGIGYVFEVELVAAMTEIHYAFNQG 28
+ G F EL A + I AF +G
Sbjct: 103 SGVYLGSFCQPLGCNSSFYAELYAVIVSIEVAFTRG 138
>gb|PON88596.1| Ribonuclease H-like domain containing protein [Trema orientalis]
Length = 286
Score = 60.8 bits (146), Expect = 4e-08
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Frame = -2
Query: 411 IFNDKTWTVEAATQLRVLIV-ESSTLDKGCMNNGQADLFRLRRLRVPGHPRKAPSIIQVD 235
+F+++ T+ +A ++ ES+ + KG N DL L+ L V P +AP I++V
Sbjct: 121 LFDNEIITMHSAIAFIWCVMGESNLIAKGPTRNSVEDLDILKCLHVQLKPPRAPRIVEVH 180
Query: 234 WHPPLPCWTKVIIDGNAQGSPGRSMAAXXXXXXXXXXXXXXVESCGIGYVFEVELVAAMT 55
W P W KV D A +PG + + S G YVFE ELVAA+
Sbjct: 181 WRVPPAGWLKVNTDSAACSNPGLAGCSGVFCTSRGFFKGIFAVSIGKAYVFEAELVAAIH 240
Query: 54 EIHYAFNQG 28
+ YA++ G
Sbjct: 241 AVSYAWDFG 249
>gb|PON43417.1| Ribonuclease H, partial [Parasponia andersonii]
Length = 213
Score = 59.7 bits (143), Expect = 6e-08
Identities = 37/110 (33%), Positives = 48/110 (43%)
Frame = -2
Query: 357 IVESSTLDKGCMNNGQADLFRLRRLRVPGHPRKAPSIIQVDWHPPLPCWTKVIIDGNAQG 178
+VES+ + G M N +L L+ L V P KAP +++V W L W KV DG A G
Sbjct: 8 VVESNRIGSGTMRNTMEELQILKCLHVQIRPLKAPRVLEVQWRVSLVGWLKVNTDGAAFG 67
Query: 177 SPGRSMAAXXXXXXXXXXXXXXVESCGIGYVFEVELVAAMTEIHYAFNQG 28
P + G GY FE EL A+ I YA+ G
Sbjct: 68 CPALAGCGGIFRTSRGFFKGAFAMPLGKGYAFEAELAGAIHAISYAWAFG 117
>ref|XP_017190741.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like
serine/threonine-protein kinase At5g59680 [Malus
domestica]
Length = 478
Score = 60.8 bits (146), Expect = 6e-08
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Frame = -2
Query: 408 FNDKTWTVEAATQ-LRVLIVESSTLDKGCMNNGQADLFRLRRLRVPGHPRKAPSIIQVDW 232
F++K ++ + ++ ++E +L+ GCM N +L L + V G P KAP II+V W
Sbjct: 351 FHEKVVSINYVVRSIKCQLLEIDSLNSGCMKNFVEELCILHSIGVRGRPTKAPKIIEVLW 410
Query: 231 HPPLPCWTKVIIDGNAQGSPGRSMAAXXXXXXXXXXXXXXVESCGIGYVFEVELVAAMTE 52
PP W KV DG A+GS G + S G+ + EL A +
Sbjct: 411 RPPSQSWIKVNTDGVARGSFGVAAFGGIFRDFTGNSLGCFAGSIGLASSLDAELRAVIHA 470
Query: 51 IHYAFNQG 28
+ +++G
Sbjct: 471 VSLVWDKG 478
>ref|XP_019451747.1| PREDICTED: uncharacterized protein LOC109353840 [Lupinus
angustifolius]
Length = 976
Score = 60.8 bits (146), Expect = 6e-08
Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = -2
Query: 396 TWTVEAATQLRVL--IVESSTLDKGCMNNGQADLFRLRRLRVPGHPRKAPSIIQVDWHPP 223
+WT A + R+ I S L K C N Q D LR L V H APS +V W+ P
Sbjct: 884 SWTTLAMAKARIKMGISMSGNLSKLCANGSQHDFSILRNLNVSPHYSSAPSTTEVVWYTP 943
Query: 222 LPCWTKVIIDGNAQGSPGRS 163
LP W K+ DG A G+PG +
Sbjct: 944 LPGWIKINSDGAAHGAPGHA 963
>ref|XP_024190007.1| uncharacterized protein LOC112193973 [Rosa chinensis]
Length = 1248
Score = 60.8 bits (146), Expect = 6e-08
Identities = 36/96 (37%), Positives = 43/96 (44%)
Frame = -2
Query: 315 GQADLFRLRRLRVPGHPRKAPSIIQVDWHPPLPCWTKVIIDGNAQGSPGRSMAAXXXXXX 136
G D L L V PRKAP I +V WHPPLP W KV DG A+G+PG +
Sbjct: 1054 GVLDSRLLSSLGVCPKPRKAPKIQRVLWHPPLPPWVKVNTDGLAKGNPGPAACGGVFRDA 1113
Query: 135 XXXXXXXXVESCGIGYVFEVELVAAMTEIHYAFNQG 28
+ G F EL A + I AF +G
Sbjct: 1114 SGVYLGSFCQPLGCNSSFYAELYAVIVSIEVAFTRG 1149
>gb|PRQ42072.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1248
Score = 60.8 bits (146), Expect = 6e-08
Identities = 36/96 (37%), Positives = 43/96 (44%)
Frame = -2
Query: 315 GQADLFRLRRLRVPGHPRKAPSIIQVDWHPPLPCWTKVIIDGNAQGSPGRSMAAXXXXXX 136
G D L L V PRKAP I +V WHPPLP W KV DG A+G+PG +
Sbjct: 1054 GVLDSRLLSSLGVCPKPRKAPKIQRVLWHPPLPPWVKVNTDGLAKGNPGPAACGGVFRDA 1113
Query: 135 XXXXXXXXVESCGIGYVFEVELVAAMTEIHYAFNQG 28
+ G F EL A + I AF +G
Sbjct: 1114 SGVYLGSFCQPLGCNSSFYAELYAVIVSIEVAFTRG 1149
>gb|PRQ52889.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1394
Score = 60.8 bits (146), Expect = 6e-08
Identities = 36/96 (37%), Positives = 43/96 (44%)
Frame = -2
Query: 315 GQADLFRLRRLRVPGHPRKAPSIIQVDWHPPLPCWTKVIIDGNAQGSPGRSMAAXXXXXX 136
G D L L V PRKAP I +V WHPPLP W KV DG A+G+PG +
Sbjct: 1187 GVLDSRLLSSLGVCPKPRKAPKIQRVLWHPPLPPWVKVNTDGLAKGNPGPAACGGVFRDA 1246
Query: 135 XXXXXXXXVESCGIGYVFEVELVAAMTEIHYAFNQG 28
+ G F EL A + I AF +G
Sbjct: 1247 SGVYLGSFCQPLGCNSSFYAELYAVIVSIEVAFTRG 1282
>gb|PON81274.1| hypothetical protein TorRG33x02_229060, partial [Trema orientalis]
Length = 223
Score = 58.9 bits (141), Expect = 1e-07
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = -2
Query: 303 LFRLRRL-RVPGHPRKAPSIIQVDWHPPLPCWTKVIIDGNAQGSPGRS 163
++RLR L RV G PRKAP I++V W PPL W KV DG+A GSPG S
Sbjct: 173 IWRLRNLLRVKGRPRKAPIIVEVIWRPPLLSWVKVNTDGSAYGSPGPS 220
>dbj|GAU30382.1| hypothetical protein TSUD_57940 [Trifolium subterraneum]
Length = 182
Score = 58.2 bits (139), Expect = 1e-07
Identities = 41/129 (31%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Frame = -2
Query: 411 IFNDKTWTVEAATQLRVLIVESSTLDKGCMNNGQA-DLFRLRRLRVPGHPRKAPSIIQVD 235
+ N K ++ A TQ+ S C + G D L+ + +P KAP II+V
Sbjct: 50 VANVKISSIIAKTQI-------SGNSTNCTSTGNIRDFCILKAFNIKVNPPKAPVIIEVL 102
Query: 234 WHPPLPCWTKVIIDGNAQGSPGRSMAAXXXXXXXXXXXXXXVESCGIGYVFEVELVAAMT 55
W PP+ W K DG A G+PG++ + GI F ELVAAM
Sbjct: 103 WQPPILHWFKCNTDGAALGAPGQAACGGIFRDSTGDYIGCFADKLGIENAFIAELVAAMK 162
Query: 54 EIHYAFNQG 28
I AF G
Sbjct: 163 AIEIAFTNG 171
>dbj|GAU50508.1| hypothetical protein TSUD_234280 [Trifolium subterraneum]
Length = 321
Score = 59.3 bits (142), Expect = 2e-07
Identities = 40/126 (31%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Frame = -2
Query: 408 FNDK--TWTVEAATQLRVLIVESSTLDKGCMNNGQADLFRLRRLRVPGHPRKAPSIIQVD 235
FN+K TW T + S K +N D L++ V H KAP + ++
Sbjct: 101 FNNKLITWK-STITMIIANTSMSGNNSKKTSSNSIRDFIVLKKFNVIIHHPKAPVLKEIL 159
Query: 234 WHPPLPCWTKVIIDGNAQGSPGRSMAAXXXXXXXXXXXXXXVESCGIGYVFEVELVAAMT 55
W PPL CWTK IDG ++G+PG + E GI + EL A MT
Sbjct: 160 WQPPLFCWTKCNIDGASKGNPGLAGCGGIFRNHVADMLYCFAEPLGIVSSYHAELCATMT 219
Query: 54 EIHYAF 37
I A+
Sbjct: 220 AIEIAY 225