BLASTX nr result

ID: Rehmannia31_contig00004743 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00004743
         (926 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV58502.1| hypothetical protein F511_23755 [Dorcoceras hygro...    47   2e-06

>gb|KZV58502.1| hypothetical protein F511_23755 [Dorcoceras hygrometricum]
          Length = 184

 Score = 47.0 bits (110), Expect(2) = 2e-06
 Identities = 19/40 (47%), Positives = 30/40 (75%)
 Frame = +2

Query: 314 RLSCTVWENYVEQILPHLENNIIDPVVVILQMGRTKVFKG 433
           +LSCT+W ++V  I+ HLE +  +P ++ILQM R+K F+G
Sbjct: 62  KLSCTLWGDFVNDIMSHLEKSGNNPAIIILQMCRSKQFRG 101



 Score = 33.9 bits (76), Expect(2) = 2e-06
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = +3

Query: 519 QVKMPNNFYVTKLIVNEAIDEIEDFKRRL 605
           ++++ N FYVTK+IV E+  EI  F+ R+
Sbjct: 102 EIRVSNTFYVTKMIVKESFGEIMQFRERV 130


Top