BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00004664
         (425 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ...   173   2e-47
gb|EOY32323.1| Uncharacterized protein TCM_040108 [Theobroma cacao]   152   7e-42
gb|OMO75305.1| Integrase, catalytic core [Corchorus capsularis]       156   2e-41
gb|OMO87828.1| Integrase, catalytic core [Corchorus capsularis]       154   1e-40
gb|PNX95321.1| retroelement pol polyprotein-like [Trifolium prat...   151   1e-39
gb|KYP53968.1| Retrovirus-related Pol polyprotein from transposo...   139   6e-39
gb|PLY93756.1| hypothetical protein LSAT_6X86400 [Lactuca sativa]     148   1e-38
gb|OMO64840.1| Integrase, catalytic core [Corchorus capsularis]       145   2e-37
gb|OMO88216.1| Integrase, catalytic core [Corchorus capsularis]       144   5e-37
gb|KYP33474.1| Retrovirus-related Pol polyprotein from transposo...   134   1e-35
gb|KYP65664.1| Retrovirus-related Pol polyprotein from transposo...   136   6e-35
gb|KYP42518.1| Retrovirus-related Pol polyprotein from transposo...   137   1e-34
gb|PNX96222.1| retrovirus-related Pol polyprotein from transposo...   135   3e-34
gb|PKH48991.1| hypothetical protein CRG98_050339, partial [Punic...   135   4e-34
gb|KYP31390.1| Retrovirus-related Pol polyprotein from transposo...   130   6e-34
dbj|GAU34863.1| hypothetical protein TSUD_19430 [Trifolium subte...   134   1e-33
gb|KYP52818.1| Retrovirus-related Pol polyprotein from transposo...   124   2e-33
dbj|GAU35639.1| hypothetical protein TSUD_394790 [Trifolium subt...   132   5e-33
gb|KYP43576.1| Retrovirus-related Pol polyprotein from transposo...   126   6e-33
gb|KYP70579.1| Retrovirus-related Pol polyprotein from transposo...   126   8e-33

>gb|EOY05030.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
           cacao]
          Length = 1141

 Score =  173 bits (439), Expect = 2e-47
 Identities = 82/138 (59%), Positives = 106/138 (76%)
 Frame = +3

Query: 6   GLYYLDPTREGVALMASKQQSAVLWHKRLGHISMDRLSHISNSFIFHSKEAFHCDACHRA 185
           GLYYL+P REG ALMAS  + A +WH+RLGH+ M+RLS I +  I + KE   CDAC RA
Sbjct: 277 GLYYLEPIREGKALMASNMRHADMWHRRLGHLPMNRLSFIGDLSI-NVKENKFCDACCRA 335

Query: 186 KQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKNKS 365
           +Q RLPF  S  +++  F+L+HCDIWG YKTPS S A YFLT+V+D+SR+ WVYL+K+KS
Sbjct: 336 RQHRLPFFASTYESSRIFELIHCDIWGDYKTPSLSGAVYFLTIVNDYSRAIWVYLMKHKS 395

Query: 366 DTRYYLIHFFNWVKTKFN 419
            TR YL+HF+ WV+T+FN
Sbjct: 396 KTRDYLLHFYQWVRTQFN 413


>gb|EOY32323.1| Uncharacterized protein TCM_040108 [Theobroma cacao]
          Length = 397

 Score =  152 bits (384), Expect = 7e-42
 Identities = 70/138 (50%), Positives = 97/138 (70%), Gaps = 1/138 (0%)
 Frame = +3

Query: 9   LYYLDPTREGVALMASKQQSAVLWHKRLGHISMDRLSHISN-SFIFHSKEAFHCDACHRA 185
           ++ L P R     +A  + + +LWH RLGHI +D LS + N S  +  K+ F C+AC RA
Sbjct: 58  VHALKPIRASKVFLAKGKNNVILWHHRLGHIPLDHLSIVPNLSITYTRKDNFFCNACCRA 117

Query: 186 KQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKNKS 365
           KQT++ F +  NK+   F+L+HCDIWGPY T S SRAHYFLT+VDD++ +TWV+LLK+K 
Sbjct: 118 KQTKVHFLIHKNKSLLAFNLIHCDIWGPYHTTSFSRAHYFLTIVDDYNWATWVFLLKHKL 177

Query: 366 DTRYYLIHFFNWVKTKFN 419
           +T+  L +FF WVKT+FN
Sbjct: 178 ETKNLLPYFFQWVKTQFN 195


>gb|OMO75305.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1373

 Score =  156 bits (395), Expect = 2e-41
 Identities = 75/139 (53%), Positives = 97/139 (69%), Gaps = 2/139 (1%)
 Frame = +3

Query: 6   GLYYLDPTREG-VALMASKQQSAVLWHKRLGHISMDRLSHISNSFI-FHSKEAFHCDACH 179
           GLYYL+P R G VA+  +K + + +WH+RLGH S +++  I  S      +   HCD+C 
Sbjct: 459 GLYYLEPVRNGGVAMSVNKGKDSSVWHRRLGHASNEKIQQIQLSCCEVVCENVLHCDSCL 518

Query: 180 RAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKN 359
           RAKQTRLPF +S  K+ S FDL+HCDIWG YKT S+S AHYFLT+VDD SR  WVYL+K 
Sbjct: 519 RAKQTRLPFSISGIKSVSCFDLIHCDIWGGYKTASSSGAHYFLTIVDDFSRGVWVYLMKY 578

Query: 360 KSDTRYYLIHFFNWVKTKF 416
           KS+  +YLI F N + T+F
Sbjct: 579 KSEVSHYLIMFCNMIATQF 597


>gb|OMO87828.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1297

 Score =  154 bits (389), Expect = 1e-40
 Identities = 74/139 (53%), Positives = 97/139 (69%), Gaps = 2/139 (1%)
 Frame = +3

Query: 6   GLYYLDPTREG-VALMASKQQSAVLWHKRLGHISMDRLSHISNSFI-FHSKEAFHCDACH 179
           GLYYL+P R G VA+  +K + + +WH+RLGH S +++  I  S      +   +CD+C 
Sbjct: 431 GLYYLEPVRNGGVAMSVNKGKDSSVWHRRLGHASNEKIQQIQLSCCEVVCENVLNCDSCL 490

Query: 180 RAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKN 359
           RAKQTRLPF +S  K+ S FDL+HCDIWG YKT S+S AHYFLT+VDD SR  WVYL+K 
Sbjct: 491 RAKQTRLPFSISGIKSVSYFDLIHCDIWGGYKTASSSGAHYFLTIVDDFSRGVWVYLMKY 550

Query: 360 KSDTRYYLIHFFNWVKTKF 416
           KS+  +YLI F N + T+F
Sbjct: 551 KSEVSHYLIMFCNMIATQF 569


>gb|PNX95321.1| retroelement pol polyprotein-like [Trifolium pratense]
          Length = 1433

 Score =  151 bits (382), Expect = 1e-39
 Identities = 73/142 (51%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
 Frame = +3

Query: 3   GGLYYLDPTREGVALMASKQQSAVLWHKRLGHIS---MDRLSHISNSFIFHSKEAFHCDA 173
           GG+Y L    +G A  A  + +  LWH R+GH S   M R+S + N F F S +   CD 
Sbjct: 471 GGVYVLKQQVQGSAFAAYHEDNTALWHARMGHPSPQVMQRISQLVN-FNFCSNKLRCCDI 529

Query: 174 CHRAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLL 353
           CHR+KQ RLPFH+S NK  + FDL+HCD+WG Y+T S+S  HYFLT+VDD+SR TWVYLL
Sbjct: 530 CHRSKQCRLPFHISYNKAENPFDLIHCDLWGKYRTSSHSGCHYFLTIVDDYSRGTWVYLL 589

Query: 354 KNKSDTRYYLIHFFNWVKTKFN 419
           K K++    L +F N V T+FN
Sbjct: 590 KEKTEVLRILTNFINMVNTQFN 611


>gb|KYP53968.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 207

 Score =  139 bits (351), Expect = 6e-39
 Identities = 66/140 (47%), Positives = 93/140 (66%), Gaps = 2/140 (1%)
 Frame = +3

Query: 6   GLYYLDPTREGVALMASKQQSAVLWHKRLGHISMDRLSHISNSFIFH--SKEAFHCDACH 179
           G+Y L  T  G +L+A  + +  LWH R+GH S   LS +S S  FH    +   CD CH
Sbjct: 30  GIYILKSTTMGTSLVAIHEDATNLWHARMGHPSDQILSQLSISLNFHFDKNKLECCDVCH 89

Query: 180 RAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKN 359
           R+KQ R PF LSNNK  + F L+HCD+W  Y T +++ AHYFLT+VDD++++ WVYLLK 
Sbjct: 90  RSKQCRFPFSLSNNKAETPFALIHCDLWRKYYTMTHNGAHYFLTIVDDYTQAVWVYLLKE 149

Query: 360 KSDTRYYLIHFFNWVKTKFN 419
           KS+T   L++F N ++T+F+
Sbjct: 150 KSETPNILMNFCNMIQTQFS 169


>gb|PLY93756.1| hypothetical protein LSAT_6X86400 [Lactuca sativa]
          Length = 1291

 Score =  148 bits (374), Expect = 1e-38
 Identities = 75/137 (54%), Positives = 94/137 (68%)
 Frame = +3

Query: 6   GLYYLDPTREGVALMASKQQSAVLWHKRLGHISMDRLSHISNSFIFHSKEAFHCDACHRA 185
           GLY ++     +  MA K   A +WH+RLGH S  RL HIS  F+    E  HCD+C +A
Sbjct: 280 GLYKMEEMDASIKAMAVKVD-AEIWHRRLGHASNSRLQHIS--FLNSLGETDHCDSCIKA 336

Query: 186 KQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKNKS 365
           KQTRLPF  S  KT++ FDL+HCDIWG Y+ PS S A YFLT+VDD+SRSTWVYLLK+KS
Sbjct: 337 KQTRLPFKDSFIKTSAPFDLIHCDIWGGYRVPSLSGARYFLTIVDDYSRSTWVYLLKHKS 396

Query: 366 DTRYYLIHFFNWVKTKF 416
           D    L+ F+  +KT+F
Sbjct: 397 DASSGLVTFYKMIKTQF 413


>gb|OMO64840.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1162

 Score =  145 bits (365), Expect = 2e-37
 Identities = 71/139 (51%), Positives = 94/139 (67%), Gaps = 2/139 (1%)
 Frame = +3

Query: 6   GLYYLDPTREGVALMA-SKQQSAVLWHKRLGHISMDRLSHISNSFI-FHSKEAFHCDACH 179
           GLYYL+P   G  LM+ +K + + +WH+ LGH S +++  I  S      +   HCD+C 
Sbjct: 455 GLYYLEPVHNGGVLMSVNKGKDSSVWHRMLGHASNEKIRQIQLSCCEVVCENVLHCDSCL 514

Query: 180 RAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKN 359
           RAKQTRLPF +S  K+ S FDL+H DIWG YKT S+S AHYFLT+VDD SR  WVYL++ 
Sbjct: 515 RAKQTRLPFSISGIKSVSCFDLIHGDIWGGYKTTSSSGAHYFLTIVDDFSRGVWVYLMEY 574

Query: 360 KSDTRYYLIHFFNWVKTKF 416
           KS+  +YLI F N + T+F
Sbjct: 575 KSEVSHYLIMFCNMIATQF 593


>gb|OMO88216.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1609

 Score =  144 bits (362), Expect = 5e-37
 Identities = 70/140 (50%), Positives = 97/140 (69%), Gaps = 3/140 (2%)
 Frame = +3

Query: 6    GLYYLDPTREGVALMA-SKQQSAVLWHKRLGHISMDRLSHISNSFIFHSKEAFH--CDAC 176
            GLYY    +  +A  + S+    +LWH+RLGH+S DRLS +++   F  K +F+  CD+C
Sbjct: 785  GLYYFQAIKVPIAATSISRDSQLILWHRRLGHLSFDRLSLLNDLGPFPVK-SFNKCCDSC 843

Query: 177  HRAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLK 356
            HRAKQTR PF +S+ KT   F+L+HCD+WGPY TPS S AHYFL++VDD SR++WVYLLK
Sbjct: 844  HRAKQTRPPFPISSIKTHEAFELIHCDVWGPYHTPSLSNAHYFLSIVDDFSRTSWVYLLK 903

Query: 357  NKSDTRYYLIHFFNWVKTKF 416
             K++   +L+ F   V  +F
Sbjct: 904  TKTEVYTWLLSFIAMVAKQF 923


>gb|KYP33474.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 339

 Score =  134 bits (338), Expect = 1e-35
 Identities = 66/140 (47%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
 Frame = +3

Query: 6   GLYYLDPTREGVALMASKQQSAVLWHKRLGHISMDRLSHISNSFIFH-SKEAFHC-DACH 179
           G+Y L  T  G +L+A  + +  LWH R+GH S   LS +S    FH  K    C D CH
Sbjct: 119 GIYILKSTTMGSSLVAVHEDATNLWHARMGHPSDQILSQLSIPLNFHFDKNKLECFDVCH 178

Query: 180 RAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKN 359
           R+KQ RLPF LSNNK  + F L+H D+W  Y T +++ AHYF+T+VDD++R+ WVYLLK 
Sbjct: 179 RSKQCRLPFSLSNNKAETPFSLIHYDLWWKYHTMAHNGAHYFITIVDDYTRAVWVYLLKE 238

Query: 360 KSDTRYYLIHFFNWVKTKFN 419
           KS T   L++F N ++T+F+
Sbjct: 239 KSKTPNILMNFCNMIQTQFS 258


>gb|KYP65664.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 529

 Score =  136 bits (342), Expect = 6e-35
 Identities = 64/140 (45%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
 Frame = +3

Query: 6   GLYYLDPTREGVALMASKQQSAVLWHKRLGHISMDRLSHISNSFIFHSKE--AFHCDACH 179
           G+Y L    +G +L A  Q ++VLWH R+GH S   L  +S+S  F   E     CD CH
Sbjct: 119 GVYVLRMANQGSSLAAQPQDASVLWHARMGHPSNKVLLKMSSSLNFSLDENKLEGCDVCH 178

Query: 180 RAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKN 359
           R+KQ  LPF +SNNK    F+L+HCD+WG Y T S++ +HYFLT+VDD +R+ WVYL+K 
Sbjct: 179 RSKQCMLPFSISNNKAVQAFELIHCDLWGRYATKSHNGSHYFLTIVDDFTRAVWVYLIKE 238

Query: 360 KSDTRYYLIHFFNWVKTKFN 419
           KS+T   +I+F   ++ +F+
Sbjct: 239 KSETPNIIINFCKLIERQFD 258


>gb|KYP42518.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 769

 Score =  137 bits (344), Expect = 1e-34
 Identities = 64/141 (45%), Positives = 93/141 (65%), Gaps = 3/141 (2%)
 Frame = +3

Query: 6   GLYYLDPTREGVALMASKQQSAVLWHKRLGHISMDRLSHISN--SFIFHSKEAFHC-DAC 176
           G+Y       G +L+AS      LWH R+GH S   LS +S   SF F++     C D C
Sbjct: 400 GIYIFTQQVGGYSLVASSGDITTLWHARMGHPSDQVLSKLSTIISFSFNANNKMECCDIC 459

Query: 177 HRAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLK 356
           HR+KQ RLPF L+ NK +  FDL+HCD+WG Y T S++ +HYFLT+VDD +R+ W+YLLK
Sbjct: 460 HRSKQCRLPFSLNYNKVSKVFDLIHCDLWGKYHTASHNGSHYFLTIVDDFTRAVWIYLLK 519

Query: 357 NKSDTRYYLIHFFNWVKTKFN 419
           +K++T   +I+++  V+T+F+
Sbjct: 520 DKTETTNVIINYYRMVQTQFD 540


>gb|PNX96222.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 1369

 Score =  135 bits (341), Expect = 3e-34
 Identities = 64/140 (45%), Positives = 88/140 (62%), Gaps = 2/140 (1%)
 Frame = +3

Query: 6   GLYYLDPTREGVALMASKQQSAVLWHKRLGHISMDRLSHISNSFI--FHSKEAFHCDACH 179
           G+Y L    +G +L A+++    LWH RLGH S   L H+S+     F+  +   CD CH
Sbjct: 403 GVYVLKEKMQGTSLAANQRDMTTLWHSRLGHPSSQALQHLSHLLRCNFNFNKIIGCDICH 462

Query: 180 RAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKN 359
           ++KQ RLPF  S NK    F L+H D+WG Y T ++  +HYFLT+VDD+SR TWVYLLK+
Sbjct: 463 KSKQCRLPFPQSINKAEEPFSLIHSDLWGRYHTAAHDGSHYFLTIVDDYSRGTWVYLLKD 522

Query: 360 KSDTRYYLIHFFNWVKTKFN 419
           K+     L++F   VKT+FN
Sbjct: 523 KTQATGILMNFCKMVKTQFN 542


>gb|PKH48991.1| hypothetical protein CRG98_050339, partial [Punica granatum]
          Length = 1053

 Score =  135 bits (340), Expect = 4e-34
 Identities = 70/138 (50%), Positives = 87/138 (63%)
 Frame = +3

Query: 3   GGLYYLDPTREGVALMASKQQSAVLWHKRLGHISMDRLSHISNSFIFHSKEAFHCDACHR 182
           GGLY         A +A   ++   WH+RLGH S + LS +  +F     E   CD C R
Sbjct: 281 GGLYCFGCITSFSAFVAKGLENQERWHRRLGHPSYNVLSLVP-AFGITEVENKTCDICFR 339

Query: 183 AKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKNK 362
           AKQTR PF  S NK+ + FDL+HCDIWGPY T S S AHYFLT+VDDHSR+TWVYL++ K
Sbjct: 340 AKQTRFPFPPSINKSENIFDLIHCDIWGPYHTASLSGAHYFLTIVDDHSRATWVYLMREK 399

Query: 363 SDTRYYLIHFFNWVKTKF 416
           S+T   L+ F N   T+F
Sbjct: 400 SETMKRLMEFCNMAHTQF 417


>gb|KYP31390.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 357

 Score =  130 bits (328), Expect = 6e-34
 Identities = 63/142 (44%), Positives = 90/142 (63%), Gaps = 4/142 (2%)
 Frame = +3

Query: 6   GLYYLDPTREGVALMASKQQSAVLWHKRLGHISMDRLSHISN----SFIFHSKEAFHCDA 173
           G+Y L    +G++L+  ++ +  LWH R+GH S   L  +S     SF F+  +   CD 
Sbjct: 129 GVYVLKRITQGISLVVVRRDATTLWHARMGHPSAKTLQCLSRLLKCSFDFNKVDC--CDI 186

Query: 174 CHRAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLL 353
            H++KQ RLPF+ S+ K   +F L+HCD+WG Y+T SN+ +HYFLT+VDD +R TW YLL
Sbjct: 187 FHKSKQCRLPFNQSDYKATKSFALIHCDLWGRYRTTSNTGSHYFLTIVDDFTRGTWAYLL 246

Query: 354 KNKSDTRYYLIHFFNWVKTKFN 419
           K K +    L+ F N VKT+FN
Sbjct: 247 KTKVEVVGILMSFCNMVKTQFN 268


>dbj|GAU34863.1| hypothetical protein TSUD_19430 [Trifolium subterraneum]
          Length = 1312

 Score =  134 bits (337), Expect = 1e-33
 Identities = 62/140 (44%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
 Frame = +3

Query: 6   GLYYLDPTREGVALMASKQQSAVLWHKRLGHISMDRLSHISNSFI--FHSKEAFHCDACH 179
           G+Y      +G+A   ++  +A LWH R+GH S   L  +S      F   +   CD CH
Sbjct: 395 GVYVFKGMEQGMAYATNQNDAAALWHCRMGHPSTQSLQQLSCLIKCRFDFNKIKCCDICH 454

Query: 180 RAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKN 359
           ++KQ RL F  S NK    FDL+HCD+WG Y T S++ +HYFLTLVDDH+R TWVYL+K+
Sbjct: 455 KSKQCRLSFSQSMNKAERPFDLIHCDLWGKYNTASSNGSHYFLTLVDDHTRGTWVYLMKH 514

Query: 360 KSDTRYYLIHFFNWVKTKFN 419
           KS     L++F+  ++T+FN
Sbjct: 515 KSQPSNVLVNFYKMIETQFN 534


>gb|KYP52818.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 180

 Score =  124 bits (312), Expect = 2e-33
 Identities = 60/131 (45%), Positives = 82/131 (62%), Gaps = 2/131 (1%)
 Frame = +3

Query: 6   GLYYLDPTREGVALMASKQQSAVLWHKRLGHISMDRLSHISNSFIFHSKE--AFHCDACH 179
           G+Y L    +G +L A  Q + VLWH  +GH S   L  +S+S  F   E     CD CH
Sbjct: 44  GVYVLRMANQGSSLAAQPQDAIVLWHAIMGHPSNKVLLKMSSSLNFSLDENKLEGCDVCH 103

Query: 180 RAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKN 359
           ++KQ  LPF LSNNK    F+L+HCD+WG Y T S++ +HYFLT+VDD + + WVYL+K 
Sbjct: 104 QSKQCMLPFSLSNNKAVQAFELIHCDLWGRYATKSHNGSHYFLTIVDDFTHAVWVYLIKE 163

Query: 360 KSDTRYYLIHF 392
           K +T   +I+F
Sbjct: 164 KLETPNMIINF 174


>dbj|GAU35639.1| hypothetical protein TSUD_394790 [Trifolium subterraneum]
          Length = 960

 Score =  132 bits (332), Expect = 5e-33
 Identities = 62/140 (44%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
 Frame = +3

Query: 6   GLYYLDPTREGVALMASKQQSAVLWHKRLGHISMDRLSHISNSFIFHS--KEAFHCDACH 179
           G+Y      +G+A   ++  +A LWH R+GH S   L  +S      S   +   CD CH
Sbjct: 189 GVYVFKGMEQGMAYATNQNDAAALWHCRMGHPSTQFLQQLSCLIKCCSDFNKIKCCDICH 248

Query: 180 RAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKN 359
           ++ Q RL F  S NK    FDL+HCD+WG Y T S++ +HYFLTLVDDH+R TWVYL+K+
Sbjct: 249 KSNQCRLSFSQSMNKAERPFDLIHCDLWGKYNTTSSNGSHYFLTLVDDHTRGTWVYLMKH 308

Query: 360 KSDTRYYLIHFFNWVKTKFN 419
           KS T   L++F+  ++T+FN
Sbjct: 309 KSQTTNVLVNFYKMIETQFN 328


>gb|KYP43576.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 289

 Score =  126 bits (317), Expect = 6e-33
 Identities = 61/139 (43%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
 Frame = +3

Query: 6   GLYYLDPTREGVALMASKQQSAVLWHKRLGHISMDRLSHISNSFIFHSKEAFH--CDACH 179
           GLYYL       A+ A  + S  LWHKRLGH S   ++ +  +    +K++ +  CD C 
Sbjct: 22  GLYYLRRIVTAAAMKAKSETSYDLWHKRLGHASTKAINMLPVTGFVQNKDSCNQVCDICL 81

Query: 180 RAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHSRSTWVYLLKN 359
           RAKQ+R  F +S NK+   F L+HCD+WGPY+TP+ + A YFLT+VDD SR+ W+YLL +
Sbjct: 82  RAKQSRESFSISENKSMDIFQLIHCDLWGPYRTPAFNGARYFLTIVDDFSRAVWIYLLVD 141

Query: 360 KSDTRYYLIHFFNWVKTKF 416
           K +   YL  F   V+ +F
Sbjct: 142 KKEVFPYLSQFITMVERQF 160


>gb|KYP70579.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 288

 Score =  126 bits (316), Expect = 8e-33
 Identities = 69/150 (46%), Positives = 88/150 (58%), Gaps = 12/150 (8%)
 Frame = +3

Query: 6   GLYYL-----DPTREGVALMASKQQSAV-----LWHKRLGHISMDRLSHISN--SFIFHS 149
           GLYYL      PT     +  S   ++      LWH RLGHIS  RL+ +S   SFI + 
Sbjct: 10  GLYYLIKTCQKPTTNTSQINTSSTHNSTYSPNALWHFRLGHISESRLNMLSELYSFINNC 69

Query: 150 KEAFHCDACHRAKQTRLPFHLSNNKTASNFDLVHCDIWGPYKTPSNSRAHYFLTLVDDHS 329
                CD CH AKQ +LPF +SN+KT+  F+L+H D+WGPY   + +   YFLT+VDD+S
Sbjct: 70  NHKHVCDVCHFAKQRKLPFSVSNSKTSRPFELLHLDLWGPYSIQTVNHQRYFLTIVDDYS 129

Query: 330 RSTWVYLLKNKSDTRYYLIHFFNWVKTKFN 419
           R TWV LLKNKS T   L HF   V  +F+
Sbjct: 130 RYTWVILLKNKSQTEQSLRHFSKLVDRQFH 159