BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00004625
         (1277 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP71432.1| Retrovirus-related Pol polyprotein from transposo...   664   0.0  
gb|KYP65915.1| Retrovirus-related Pol polyprotein from transposo...   661   0.0  
gb|KYP58378.1| Retrovirus-related Pol polyprotein from transposo...   654   0.0  
gb|PNX86396.1| putative LRR receptor-like protein kinase, partia...   610   0.0  
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   603   0.0  
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]     602   0.0  
gb|OMO68768.1| Integrase, catalytic core [Corchorus capsularis]       602   0.0  
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   584   0.0  
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...   577   0.0  
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   583   0.0  
gb|KYP55941.1| Retrovirus-related Pol polyprotein from transposo...   552   0.0  
gb|KZV20046.1| retrovirus-related Pol polyprotein from transposo...   541   0.0  
gb|KYP43625.1| Retrovirus-related Pol polyprotein from transposo...   565   0.0  
dbj|GAU43466.1| hypothetical protein TSUD_141040 [Trifolium subt...   550   0.0  
dbj|GAU26309.1| hypothetical protein TSUD_56070 [Trifolium subte...   558   0.0  
gb|PNX86003.1| retrotransposon protein [Trifolium pratense]           533   0.0  
gb|PKA48313.1| Retrovirus-related Pol polyprotein from transposo...   552   0.0  
gb|KYP46287.1| Retrovirus-related Pol polyprotein from transposo...   535   0.0  
gb|KYP67390.1| Retrovirus-related Pol polyprotein from transposo...   527   0.0  
gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposo...   547   0.0  

>gb|KYP71432.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 515

 Score =  664 bits (1713), Expect = 0.0
 Identities = 322/425 (75%), Positives = 375/425 (88%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            KTK N DG++QK+KARLVAKGY+QQ G+DY+ETFAPVARLDTIRALIALAA+K W IYQL
Sbjct: 50   KTKLNSDGTIQKHKARLVAKGYSQQLGVDYNETFAPVARLDTIRALIALAAEKGWNIYQL 109

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNG L+E+IYVEQPQGF+ +G EDKVLRL+KALYGLKQAPRAWYSRID YFT+ 
Sbjct: 110  DVKSAFLNGVLQEKIYVEQPQGFISKGNEDKVLRLRKALYGLKQAPRAWYSRIDQYFTDH 169

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GFRRS+SEPTLYIKTQG  +TLIVSLYVDDLI+TGNN  M+ +FKEDMMKTFEMTDLGLM
Sbjct: 170  GFRRSKSEPTLYIKTQGQYDTLIVSLYVDDLIYTGNNMKMMTKFKEDMMKTFEMTDLGLM 229

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
            +YFLGIE+ Q+K GIFI QKKY E+LLK+FKM GCKTV TPL   + L+K+DG+P AD S
Sbjct: 230  NYFLGIEVSQKKKGIFICQKKYTEALLKKFKMSGCKTVTTPLVTKEKLQKDDGAPDADAS 289

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
            +++SLIGS LYLTATRP IMYA S LSRFMQ PSQIH+GAAKR++RYL+GTK +GIWY++
Sbjct: 290  RYKSLIGSSLYLTATRPYIMYAVSLLSRFMQKPSQIHFGAAKRIIRYLQGTKEFGIWYKT 349

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
            +T+S L+GYTDSDW GS+DDMKST GYAF+LGSGIFSWASKKQATVAQS+AEAEY+AAA 
Sbjct: 350  MTNSSLLGYTDSDWVGSVDDMKSTFGYAFSLGSGIFSWASKKQATVAQSTAEAEYVAAAE 409

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
             TSQAIWL+RIL ++GE Q+  T I+CD+KS IAM KNP+ H+RTKHI IKYHFIREAE 
Sbjct: 410  ATSQAIWLRRILAEIGEQQDGPTTIYCDNKSTIAMTKNPIHHSRTKHIAIKYHFIREAET 469

Query: 1263 NSEIE 1277
              EI+
Sbjct: 470  TREIK 474


>gb|KYP65915.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 690

 Score =  661 bits (1705), Expect = 0.0
 Identities = 323/425 (76%), Positives = 373/425 (87%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            KTK NPDG++QK+KARLVAKGY+QQ G+DY+ETFAPVARLDTIRALIALAA+K W I+QL
Sbjct: 225  KTKLNPDGTIQKHKARLVAKGYSQQPGVDYNETFAPVARLDTIRALIALAAEKGWNIFQL 284

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNG L+EEIYVEQPQGF+ +G EDKVLRL+KALYGLKQAPRAWYSRID YFT+ 
Sbjct: 285  DVKSAFLNGVLQEEIYVEQPQGFISKGNEDKVLRLRKALYGLKQAPRAWYSRIDQYFTDH 344

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GFRRS+SEPTLYIKTQG  +TLIVSLYVDDLI+TGNN  M+ EFKEDMMKTFEMTDLGLM
Sbjct: 345  GFRRSKSEPTLYIKTQGQYDTLIVSLYVDDLIYTGNNMKMMTEFKEDMMKTFEMTDLGLM 404

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
            +YFLGIE+ Q+K GIFI QKKY E+LLK+FKM GCKTV TPL   + L+K+DG+P AD S
Sbjct: 405  NYFLGIEVSQKKKGIFICQKKYTEALLKKFKMSGCKTVTTPLVTKEKLQKDDGAPDADAS 464

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
            ++RSLIGSLLYLTATRPDI YA S LSRFMQ PSQIH+GAAKR+LRYL+GTK +GIWY++
Sbjct: 465  RYRSLIGSLLYLTATRPDITYAVSLLSRFMQKPSQIHFGAAKRILRYLQGTKEFGIWYKT 524

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
            +T+S L+GYTD D AGS+DDMKSTSGYAF+LGSGIFSWASKK ATVAQS+AEAEY+AAA 
Sbjct: 525  MTNSSLLGYTDCDLAGSVDDMKSTSGYAFSLGSGIFSWASKKHATVAQSTAEAEYVAAAE 584

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
             TSQAIWL+RIL +M E Q+  T I+CD+KS IAM KNP  H+RTKHI IKYHFI+E E 
Sbjct: 585  ATSQAIWLRRILAEMREQQDGPTTIYCDNKSTIAMTKNPKHHSRTKHIAIKYHFIKEVET 644

Query: 1263 NSEIE 1277
              +I+
Sbjct: 645  TKKIK 649


>gb|KYP58378.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 703

 Score =  654 bits (1688), Expect = 0.0
 Identities = 322/425 (75%), Positives = 370/425 (87%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            KTK N DG++QK+KARLVAKGY QQ G+DY+ETFAPVARL+TIRALIALAA K W IYQL
Sbjct: 239  KTKLNLDGTIQKHKARLVAKGYLQQPGVDYNETFAPVARLETIRALIALAAHKGWNIYQL 298

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            +VKSAFLNG LEEEIYVEQP GFV++G E KVLRLKKA YGLKQAPRAWY +ID YFT+ 
Sbjct: 299  NVKSAFLNGVLEEEIYVEQPPGFVMKGHEGKVLRLKKASYGLKQAPRAWYRKIDQYFTDH 358

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GFRRS+SEPTLYIKTQG  +TL++SLYVDDLI+TG N NM+MEFK+DMMKTFEMTDLGLM
Sbjct: 359  GFRRSKSEPTLYIKTQG-QHTLLLSLYVDDLIYTGTNTNMMMEFKKDMMKTFEMTDLGLM 417

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
             YFLGIE+ QR DGIFI +KKY E+LLK+F MYGCK V+TPL  N+ L+K DG+P+AD S
Sbjct: 418  SYFLGIEVSQRNDGIFILKKKYTEALLKKFNMYGCKPVSTPLVTNEKLQKVDGAPEADAS 477

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
            Q+RSL+GSLLYLTA RPDIM+ATS LSRFMQ PSQIHYG  KR+LRYL+GT+ +GIWY++
Sbjct: 478  QYRSLVGSLLYLTAIRPDIMFATSLLSRFMQKPSQIHYGTGKRILRYLQGTREFGIWYKT 537

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
            +T S++IGYTDSDWAGSIDDMKSTSGYAF+LGS  FSWASKKQ TVAQS+ EAEYIAAA 
Sbjct: 538  MTKSRMIGYTDSDWAGSIDDMKSTSGYAFSLGSRFFSWASKKQPTVAQSTVEAEYIAAAE 597

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
            TTSQAIWL+RILE+M E Q+  T I+CD+KSAI MAKNPV H RTKHI IKYHFIREAE 
Sbjct: 598  TTSQAIWLRRILEEMSEQQDGPTIIYCDNKSAITMAKNPVHHQRTKHIAIKYHFIREAET 657

Query: 1263 NSEIE 1277
              +I+
Sbjct: 658  TKQIQ 662


>gb|PNX86396.1| putative LRR receptor-like protein kinase, partial [Trifolium
            pratense]
          Length = 466

 Score =  610 bits (1572), Expect = 0.0
 Identities = 307/425 (72%), Positives = 349/425 (82%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            KTK NPDGS+QK+KARLVAKGY+QQ G+DY+ETFAPVARLDTIRALIAL+AQK W IYQL
Sbjct: 60   KTKLNPDGSIQKHKARLVAKGYSQQPGVDYNETFAPVARLDTIRALIALSAQKGWSIYQL 119

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNG LEEEIYVEQPQGFV++G EDKVLRL+KALYGLKQAPRAWYSRID YF + 
Sbjct: 120  DVKSAFLNGILEEEIYVEQPQGFVVKGNEDKVLRLRKALYGLKQAPRAWYSRIDQYFMDR 179

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GFRRS+SEPTLYIKTQG  +TLIVSLYVDDLI+TGNN  +I  FKEDMMKTFEMTDLGLM
Sbjct: 180  GFRRSKSEPTLYIKTQGQYDTLIVSLYVDDLIYTGNNITLINGFKEDMMKTFEMTDLGLM 239

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
            +YFLGIE                                        ++K+DGSP+AD S
Sbjct: 240  NYFLGIE----------------------------------------MQKDDGSPEADAS 259

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
            ++RSLIGSLLYLTATRPDIMYATS LSRFMQ PSQIH+GA KR+LRYL+GTK YG+WY+S
Sbjct: 260  RYRSLIGSLLYLTATRPDIMYATSLLSRFMQKPSQIHFGAGKRILRYLQGTKEYGMWYKS 319

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
            + +SKL+GYTDSDWAGS+DDMKSTSGYAF+LGSG FSWASKKQATVAQS+AEAEY+AAA 
Sbjct: 320  IGNSKLLGYTDSDWAGSLDDMKSTSGYAFSLGSGFFSWASKKQATVAQSTAEAEYVAAAE 379

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
             TSQ+IWL+RIL DMGE  ++ T I+CD+KSAIAMA NPV H+RTKHI IKYHFIREA  
Sbjct: 380  ATSQSIWLRRILGDMGEQVDEPTIIYCDNKSAIAMANNPVHHHRTKHIAIKYHFIREANT 439

Query: 1263 NSEIE 1277
              +I+
Sbjct: 440  TKQIQ 444


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  603 bits (1554), Expect = 0.0
 Identities = 292/425 (68%), Positives = 360/425 (84%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            KTK N DGSVQKYKARLVAKG+ Q+ GIDY ET+APVARL+TIR +IALAAQK+WKIYQL
Sbjct: 684  KTKLNLDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQL 743

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNGYL+EEIYVEQP+GF +QG E+KV RLKKALYGLKQAPR WYS+ID YF + 
Sbjct: 744  DVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRVWYSQIDKYFIQK 803

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GF +S SEPTLY+   GT+  LIVSLYVDDLI+TGN+E M+ +FK+DMM T+EM+DLGL+
Sbjct: 804  GFAKSISEPTLYVNKTGTD-ILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLL 862

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
            +YFLG+E+HQ  +GIFISQ+KYAE++LK+FKM  CK+V TPL  N+  K  DG+ K D +
Sbjct: 863  YYFLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKVDPT 922

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
             +RSL+GSLLYLTATRPDIM+A S LSR+M +PSQ+++ AAKRVLRY++GT +YGIWY+ 
Sbjct: 923  IYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGIWYKP 982

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
            V +SKLIGYTDSDWAG +DDMK TSGYAF+LGSG+ SW++KKQ  VA SSAEAEY+AA+ 
Sbjct: 983  VKESKLIGYTDSDWAGCLDDMKGTSGYAFSLGSGMCSWSTKKQNIVALSSAEAEYVAASK 1042

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
              SQ +WL+RI+ED+GE Q + T I+CDSKSAIA+++NPV H+RTKHI IKYH+IREA  
Sbjct: 1043 AVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKYHYIREAVD 1102

Query: 1263 NSEIE 1277
              E++
Sbjct: 1103 RQEVK 1107


>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1136

 Score =  602 bits (1553), Expect = 0.0
 Identities = 293/425 (68%), Positives = 360/425 (84%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            KTK NPDGSVQKYKARLVAKG+ Q+ GIDY ET+A VARL+TI  +IALAAQK+WKIYQL
Sbjct: 678  KTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAHVARLETIHTIIALAAQKRWKIYQL 737

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNGYL+EEIYVEQP+ F +QG E+KV RLKKALYGLKQAPRAWYS+ID YF + 
Sbjct: 738  DVKSAFLNGYLDEEIYVEQPERFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQK 797

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GF +S SEP LY+K  GT+  LIVSLYVDDLI+TGN+E ++ +FK+DMM T+EM+DLGL+
Sbjct: 798  GFAKSISEPILYVKKTGTD-ILIVSLYVDDLIYTGNSEKLMQDFKKDMMHTYEMSDLGLL 856

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
            HYFLG+E+HQ  +GIFISQ+KYAE++LK+FKM  CK+V TPL  N+  K  DG+ KAD +
Sbjct: 857  HYFLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPT 916

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
             +RSL+GSLLYLTATRPDIM+A S LSR+M +PSQ+++ AAKRVLRY++GT  YGIWY+ 
Sbjct: 917  IYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTAYYGIWYKP 976

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
            V +SKLIGYTDSDWAG +DDMKSTSGYAF+LGSG++SW++KKQ  VA SSAEAEY+AA+ 
Sbjct: 977  VKESKLIGYTDSDWAGCLDDMKSTSGYAFSLGSGMWSWSTKKQNIVALSSAEAEYVAASK 1036

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
              SQ +WL+RI+ED+GE Q + T I+CDSKSAIA+ +NPV H+RTKHI IKYH+IREA  
Sbjct: 1037 AVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAINENPVSHDRTKHIAIKYHYIREAVD 1096

Query: 1263 NSEIE 1277
              E++
Sbjct: 1097 RQEVK 1101


>gb|OMO68768.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 1149

 Score =  602 bits (1552), Expect = 0.0
 Identities = 290/425 (68%), Positives = 355/425 (83%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            K K N DGSVQ++KARLVAKGY+QQ GID+ E FAPVARLDT+RA+IALAA K W +YQL
Sbjct: 717  KVKHNSDGSVQRHKARLVAKGYSQQPGIDFDENFAPVARLDTVRAVIALAAHKGWHLYQL 776

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNG L+E++YVEQPQGFVI+G+E+KV +L KALYGLKQAPRAWYS ID YF + 
Sbjct: 777  DVKSAFLNGELKEDVYVEQPQGFVIEGEEEKVYKLSKALYGLKQAPRAWYSNIDSYFIKQ 836

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GF +S+SEPTLY+K   + + LIV++YVDDL+FTGNNE M+ +FKEDMMK +EM+DLGLM
Sbjct: 837  GFEKSKSEPTLYVKHH-SGDFLIVAIYVDDLVFTGNNEKMMRKFKEDMMKKYEMSDLGLM 895

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
            H+FLGIE+HQ  DG+FI QKKYAE +LK+F M  CK VATPL  N+ LKK+DG  K D S
Sbjct: 896  HHFLGIEVHQSNDGVFICQKKYAEKILKKFNMSDCKPVATPLIANEKLKKDDGGKKVDAS 955

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
             +RSLIG+LLY TATRPDIM+A S LSRFM + S +H+GAAKRVLRY++GT +YGI Y S
Sbjct: 956  VYRSLIGNLLYFTATRPDIMFAASLLSRFMNSSSHLHFGAAKRVLRYIQGTLDYGIKYGS 1015

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
              + KL+G++DSDWAGS+DDMKSTSGY F+ GSG+FSW SKKQ TVAQSSAEAEY+AA++
Sbjct: 1016 SNEPKLVGFSDSDWAGSLDDMKSTSGYVFSFGSGVFSWCSKKQQTVAQSSAEAEYVAASL 1075

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
             T QAIWLKRI+ED+ E   +A  I+CD+KSAIAMAKNPV+H+RTKHI IK+HFIR+A  
Sbjct: 1076 ATQQAIWLKRIVEDIEEKPAEAVIIYCDNKSAIAMAKNPVYHSRTKHIAIKHHFIRDAIE 1135

Query: 1263 NSEIE 1277
              +++
Sbjct: 1136 EGKVQ 1140


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|ABF99717.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1335

 Score =  584 bits (1506), Expect = 0.0
 Identities = 287/425 (67%), Positives = 351/425 (82%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            KTK NPDGSVQKYKARLVAKG+ Q+ GIDY ET+APVARL+TIR +IALAAQK+WKIYQL
Sbjct: 894  KTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQL 953

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNGYL+EEIYVEQP+GF +QG E+KV RLKKALYGLKQAPRAWYS+ID YF + 
Sbjct: 954  DVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQK 1013

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GF +S SEPTLY+   GT+  LIVSLYVDDLI+TGN+E M+ +FK+DMM T+EM+DLGL+
Sbjct: 1014 GFAKSISEPTLYVNKTGTD-ILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLL 1072

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
            HYFLG+E+HQ  +GIFISQ+KYAE++LK+FKM  CK+V TPL  N+  K  DG+ KAD +
Sbjct: 1073 HYFLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPT 1132

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
             +RSL+GSLLYLTATRPDIM+A S LSR+M +PSQ+++ AAKRVLRY++GT +YGIWY+ 
Sbjct: 1133 IYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGIWYKP 1192

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
            V +SKLIGYTDSDWAG +DDMKSTSGYAF+LG                 SAEAEY+AA+ 
Sbjct: 1193 VKESKLIGYTDSDWAGCLDDMKSTSGYAFSLG-----------------SAEAEYVAASK 1235

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
              SQ +WL+RI+ED+GE Q + T I+CDSKSAIA+++NPV H+RTKHI IKYH+IREA  
Sbjct: 1236 AVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKYHYIREAVD 1295

Query: 1263 NSEIE 1277
              E++
Sbjct: 1296 RQEVK 1300


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score =  577 bits (1487), Expect = 0.0
 Identities = 284/425 (66%), Positives = 349/425 (82%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            KTK NPDGSVQKYKARLVAKG+ Q+ GIDY ET+APVARL+TIR +IALAAQK+WKIYQL
Sbjct: 757  KTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQL 816

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNGYL+EEIYVEQP+GF +QG E+KV RLKKALYGLKQAPRAWYS+ID YF + 
Sbjct: 817  DVKSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYFIQK 876

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GF +S SEPTLY+   GT+  LIVSLYVDDLI+TGN+E M+ +FK+DMM T+EM+DLGL+
Sbjct: 877  GFAKSISEPTLYVNKTGTD-ILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLGLL 935

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
            HYFLG+E+HQ  +GIFISQ+KYA+++LK+FKM  CK+V TPL  N+  K   G+ KAD +
Sbjct: 936  HYFLGMEVHQSDEGIFISQRKYAKNILKKFKMDNCKSVTTPLLPNEKQKARYGADKADPT 995

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
             +RSL+GSLLYLTATRPDIM+A S LSR+M +PSQ+++ AAKRVLRY++GT +YGIWY+ 
Sbjct: 996  IYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGIWYKP 1055

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
            V +SKLIGYTDSDWAG +DDMKSTS YAF+LG                 SAEAEY+AA+ 
Sbjct: 1056 VKESKLIGYTDSDWAGCLDDMKSTSSYAFSLG-----------------SAEAEYVAASK 1098

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
              SQ +WL+RI+ED+GE Q + T I+CDSKSAIA+++NPV H+RTKHI IKYH+IREA  
Sbjct: 1099 AVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKYHYIREAVD 1158

Query: 1263 NSEIE 1277
              E++
Sbjct: 1159 RQEVK 1163


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  583 bits (1502), Expect = 0.0
 Identities = 281/425 (66%), Positives = 349/425 (82%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            + K + DG VQ+ KARLVAKGY+QQ G D+ ETFAPVARLDTIR +IA+AAQK W +YQL
Sbjct: 957  RXKYHSDGRVQRLKARLVAKGYSQQPGXDFHETFAPVARLDTIRTIIAVAAQKGWLLYQL 1016

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            D+KSAFLNG LE EIYVEQPQGFV+ G+E+KV +LKKALYGLKQAPRAWY++ID YF E 
Sbjct: 1017 DIKSAFLNGKLEXEIYVEQPQGFVVDGEENKVYKLKKALYGLKQAPRAWYTQIDSYFIEN 1076

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GF RS+SEPTLY+K++  +  LIV+LYVDDLIFTGN+E M+ +F+ +MMK +EM+D+GL+
Sbjct: 1077 GFIRSKSEPTLYVKSKDNSQILIVALYVDDLIFTGNDEKMVEKFRNEMMKKYEMSDMGLL 1136

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
            HYFLGIE++Q +DG+FI QK+Y E +LK+F M GC  V+TPL  N+ L+KEDG    D +
Sbjct: 1137 HYFLGIEVYQEEDGVFICQKRYVEHILKKFGMAGCNXVSTPLVVNEKLRKEDGGKMVDET 1196

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
             FRSL+G+LLYLTATRPDIM+A S LSRFM  PS +H GAAKRVLRYL+GT   GI Y  
Sbjct: 1197 HFRSLVGNLLYLTATRPDIMFAASLLSRFMHYPSHLHLGAAKRVLRYLQGTVELGIKYFR 1256

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
              + KLIG+ DSDW G IDDMKSTSGYAF+LGSG+ SW SKKQ +VAQSSAEAEYI+A++
Sbjct: 1257 NIEVKLIGHCDSDWGGCIDDMKSTSGYAFSLGSGVISWVSKKQGSVAQSSAEAEYISASL 1316

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
             TSQAIWL+RILED+ E Q +AT + CD+KSAIA+AKN VFH+RT+HI +KYHFI+E  +
Sbjct: 1317 ATSQAIWLRRILEDIKEKQNEATYLLCDNKSAIAIAKNXVFHSRTRHIAVKYHFIKEVIS 1376

Query: 1263 NSEIE 1277
            + E++
Sbjct: 1377 DGEVQ 1381


>gb|KYP55941.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 723

 Score =  552 bits (1422), Expect = 0.0
 Identities = 266/418 (63%), Positives = 332/418 (79%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            +TK NPD S+ KYKA LV KGY QQ GIDY+ETFAPVAR D I  L+ALAAQ +W+I+ +
Sbjct: 299  RTKLNPDRSINKYKAILVVKGYVQQPGIDYTETFAPVARRDPIHILLALAAQMKWEIWHV 358

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNG L EEIYV QP+GFV++G EDKV +L KALYGLKQAPRAWYSRID YF   
Sbjct: 359  DVKSAFLNGNLVEEIYVAQPEGFVVKGDEDKVYKLHKALYGLKQAPRAWYSRIDSYFCNQ 418

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GFRRS+++ TLY+K      +LI+SLYVDDL+ T NN+  + +  E+M   F+M++LG M
Sbjct: 419  GFRRSENDTTLYVKKLLDGGSLIISLYVDDLLVTSNNQQEVQQLMEEMQNQFKMSNLGKM 478

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
            +YFLG+E+HQ KDGIF++Q+KYA  +LK++KM  CK V TPL  N  L KEDG+ K + S
Sbjct: 479  NYFLGLEVHQTKDGIFMNQEKYAHEVLKKYKMESCKFVPTPLVQNLKLSKEDGAEKVNVS 538

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
             +RSL+GSLLYLT++RPD+MYA S LSRFMQ+PS+IH+ A KRVLRYL+GT  +GIWY+ 
Sbjct: 539  LYRSLVGSLLYLTSSRPDLMYAASLLSRFMQSPSEIHFAATKRVLRYLKGTTQFGIWYKP 598

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
              +  LIGY DSDWAG+IDDMKST GY F+LG G+FSW SKKQ  VAQS+AEAEY+  A 
Sbjct: 599  RKNGSLIGYVDSDWAGNIDDMKSTMGYIFSLGFGMFSWNSKKQEIVAQSTAEAEYVVGAA 658

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREA 1256
             T+QAIWL+RIL D+G  Q +AT+I+CDSKSAIA+A+NPV H +TKHI++K+H IREA
Sbjct: 659  ATNQAIWLRRILLDLGAEQLEATEIYCDSKSAIAIAQNPVQHGKTKHIQVKFHVIREA 716


>gb|KZV20046.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dorcoceras hygrometricum]
          Length = 499

 Score =  541 bits (1394), Expect = 0.0
 Identities = 264/424 (62%), Positives = 340/424 (80%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            +TK N DGS+ KYKARLV KGYAQ +G+DYS+TFAPVARLDTIR L+A+AAQK WK++QL
Sbjct: 41   RTKLNADGSINKYKARLVVKGYAQIFGVDYSDTFAPVARLDTIRLLLAIAAQKNWKVHQL 100

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNG+L+EEIYVEQP+G+  +G+EDKV  LKKALYGLKQAPRAWYSRIDD+   L
Sbjct: 101  DVKSAFLNGFLQEEIYVEQPEGYKKEGEEDKVYLLKKALYGLKQAPRAWYSRIDDHLHNL 160

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GF +S SE TLY+K  GT+  LI+SLYVDDL+ TGNN N++ +FK++MM+ FEMT+LGLM
Sbjct: 161  GFAKSLSESTLYVKHTGTD-ILIISLYVDDLLVTGNNTNIVEKFKQEMMEIFEMTNLGLM 219

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
             +FLG+EI Q +  +FI QKKYA+ +LK+FK+  CK + TP+++ + L KEDG+ K D +
Sbjct: 220  TFFLGMEIKQSEFEVFICQKKYAKEILKKFKLEECKQMGTPMNSKERLCKEDGTEKTDLA 279

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
             FRSLIG L+YLTATRPDI+ + S LSRFM   S+ H  AAKRVLRY++GT ++GI Y  
Sbjct: 280  YFRSLIGCLMYLTATRPDILNSVSILSRFMHCASEEHLKAAKRVLRYVKGTCDFGIKYTR 339

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
              + KL+G++DSDW GSIDDMKSTSGY FTLGSG+FSW+SKKQ  VAQS+AEAE+IAA  
Sbjct: 340  SKEFKLVGFSDSDWGGSIDDMKSTSGYCFTLGSGVFSWSSKKQEIVAQSTAEAEFIAATA 399

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
              +QA+WL++IL D+   Q ++T+I  D+++AIA++KNPVFH +TKH  IK  F+RE + 
Sbjct: 400  AVNQALWLRKILFDLSLEQTQSTEIHVDNQAAIAISKNPVFHGKTKHFNIKLFFLREVQK 459

Query: 1263 NSEI 1274
            N  +
Sbjct: 460  NGAV 463


>gb|KYP43625.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1262

 Score =  565 bits (1456), Expect = 0.0
 Identities = 272/425 (64%), Positives = 341/425 (80%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            +TK NPD S+ KYKA LV KGY QQ GIDY+ETFAPVAR+DTIR L+ALAAQ +W+I+ L
Sbjct: 797  RTKLNPDRSINKYKAILVVKGYVQQPGIDYTETFAPVARMDTIRILLALAAQMKWEIWHL 856

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNG L EEIYV QP+GFV++G EDKV +L KALYGLKQAPRAWYSRID YF   
Sbjct: 857  DVKSAFLNGNLVEEIYVAQPEGFVVKGDEDKVYKLHKALYGLKQAPRAWYSRIDSYFCSQ 916

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GFRRS+++ TLY+K      +LI+SLYVDDL+ T NN+  + +  E+M   F+M++LG M
Sbjct: 917  GFRRSENDATLYVKKLLDGGSLIISLYVDDLLVTSNNQQEVQQLMEEMQNQFKMSNLGKM 976

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
            +YFLG+E+HQ KDGIF++Q+KYA  +LK++KM  CK V TPL  N  L KEDG+ K + S
Sbjct: 977  NYFLGLEVHQTKDGIFMNQEKYAHEVLKKYKMESCKFVPTPLVQNLKLSKEDGAGKVNVS 1036

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
             +RSL+GSLLYLT++RPD+MYA S LSRFMQ+PS+IH+ A KRVLRYL+GT  +GIWY+ 
Sbjct: 1037 LYRSLVGSLLYLTSSRPDLMYAASLLSRFMQSPSEIHFAATKRVLRYLKGTTQFGIWYKP 1096

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
              +  LIGY DSDWAG+IDDMKST+GY F+LGSG+FSW SKKQ  VAQS+AEAEY+A A 
Sbjct: 1097 RKNGSLIGYVDSDWAGNIDDMKSTTGYVFSLGSGMFSWNSKKQEIVAQSTAEAEYVAGAA 1156

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
              +QAIWL++IL D+G  Q +AT+I+CDSKSAIA+A+NPV H +TKHI++K+H IREA  
Sbjct: 1157 AANQAIWLRKILLDLGAEQLEATEIYCDSKSAIAIAENPVQHGKTKHIQVKFHVIREAVK 1216

Query: 1263 NSEIE 1277
            N EI+
Sbjct: 1217 NHEIK 1221


>dbj|GAU43466.1| hypothetical protein TSUD_141040 [Trifolium subterraneum]
          Length = 781

 Score =  550 bits (1416), Expect = 0.0
 Identities = 273/424 (64%), Positives = 330/424 (77%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            +TK NPDGS+ K KARLV KGY QQ+G+D+S+TFAPVAR DTIR L+ALAA+  WKIY  
Sbjct: 316  RTKLNPDGSINKLKARLVVKGYFQQHGVDFSDTFAPVARHDTIRLLVALAAKLGWKIYHF 375

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNG L+E+IYV+QP+GF + G E+KV +L KALYGLKQAPRAWYSRID Y  + 
Sbjct: 376  DVKSAFLNGLLDEDIYVDQPEGFKVVGSENKVYKLHKALYGLKQAPRAWYSRIDGYLLQS 435

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GF+RS++E TLY+K       LIVSLYVDDL+  GN  N + +FK+ M   FEMTDLG M
Sbjct: 436  GFKRSENEATLYVKWSKNEVKLIVSLYVDDLLVIGNESNSLSQFKQAMENEFEMTDLGEM 495

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
             YFLG+EI Q   GIFISQKKYA  +L++F M  CK V+TPL  N+ L K+DG   AD S
Sbjct: 496  KYFLGMEIFQSSAGIFISQKKYALEVLRKFHMDKCKHVSTPLVVNEKLSKDDGDNSADAS 555

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
             +RS+IGSLLYL+ATRPDIM+A S LSRFM +PSQ+H GAAKRVLRY++GT +YG+ +  
Sbjct: 556  IYRSIIGSLLYLSATRPDIMFAASLLSRFMHSPSQVHLGAAKRVLRYIKGTTDYGLCFLK 615

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
                 L GYTDSDWAGS+DD KSTSGY F+ GS +FSW SKKQ  +AQSSAEAEYI+AA 
Sbjct: 616  SESGDLQGYTDSDWAGSVDDEKSTSGYVFSFGSAVFSWNSKKQEVIAQSSAEAEYISAAG 675

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
             T+Q IWL++IL D+G+ Q KAT I+ D+KSAIA+AKNPV H RTKHIK+KYH IREAE 
Sbjct: 676  ATNQTIWLRKILSDVGQFQSKATVIWVDNKSAIAIAKNPVQHGRTKHIKVKYHAIREAEK 735

Query: 1263 NSEI 1274
            + EI
Sbjct: 736  SKEI 739


>dbj|GAU26309.1| hypothetical protein TSUD_56070 [Trifolium subterraneum]
          Length = 1071

 Score =  558 bits (1437), Expect = 0.0
 Identities = 266/425 (62%), Positives = 336/425 (79%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            +TK NPDGS+ K+KARLV KGY+Q  G+DY +TFA VAR +TIR ++AL+AQ  WK + L
Sbjct: 607  RTKLNPDGSIHKHKARLVVKGYSQMAGVDYGDTFASVARHETIRLIVALSAQNGWKFFHL 666

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNG L+EEIYVEQP GF++ G EDKV RL KALYGLKQAPRAWYSRID +F E 
Sbjct: 667  DVKSAFLNGVLQEEIYVEQPTGFIVSGHEDKVYRLYKALYGLKQAPRAWYSRIDSHFLEN 726

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
             F+RSQ+EPTLY+K  G    LIVSLYVDDL+ TG++ N I  FK+ M++ FEMTDLG M
Sbjct: 727  DFKRSQNEPTLYVKDYGNGKRLIVSLYVDDLLVTGDDINAINNFKKSMLQAFEMTDLGEM 786

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
             YFLG+E++Q  DGIF+SQ+KYA  +LK+FK+  CK V+TPL  N+ L K+DG  KAD +
Sbjct: 787  KYFLGMELYQLDDGIFLSQRKYANDVLKKFKLESCKPVSTPLAVNEKLSKDDGDVKADVT 846

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
            Q+RSLIG LLYLTATRPD+M++ S LSRF  +PS  H+G  KRVLRY++GT ++GIWY  
Sbjct: 847  QYRSLIGCLLYLTATRPDLMFSASLLSRFRHSPSVTHFGVGKRVLRYIKGTSDFGIWYNK 906

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
             +D KL G+ DSDWAGS+DD KST+GY F+LGSG+FSW SKKQ  VAQSSAEAEYIAAA 
Sbjct: 907  -SDGKLEGFVDSDWAGSVDDSKSTTGYVFSLGSGVFSWNSKKQDVVAQSSAEAEYIAAAA 965

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
             ++QAIW+K++L D+   Q +   ++CD+KSAI++AKNP+ H RTKHI +K+H IREAE 
Sbjct: 966  ASNQAIWIKKVLTDLNHGQMEPIVLWCDNKSAISIAKNPIQHGRTKHINVKFHVIREAEK 1025

Query: 1263 NSEIE 1277
            N +++
Sbjct: 1026 NGDVQ 1030


>gb|PNX86003.1| retrotransposon protein [Trifolium pratense]
          Length = 490

 Score =  533 bits (1373), Expect = 0.0
 Identities = 261/424 (61%), Positives = 333/424 (78%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            KTK N DGSVQKYKARLVAKGY+QQ G+D++ETFAPVAR++TIR ++ALAAQ + +++QL
Sbjct: 33   KTKYNEDGSVQKYKARLVAKGYSQQPGVDFNETFAPVARMETIRTVLALAAQLELQVFQL 92

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNG LEEE+YV+QPQGF  +GKE KV +L KALYGLKQAPRAW S+ID YF + 
Sbjct: 93   DVKSAFLNGELEEEVYVKQPQGFEAKGKERKVYKLHKALYGLKQAPRAWNSKIDAYFLQN 152

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GF +S SEP+LY+K  G N  L+V LYVDDLI+ G N NM+  FKE MMK +EMTDLGLM
Sbjct: 153  GFVKSPSEPSLYVKRNGAN-FLMVCLYVDDLIYAGTNPNMVQSFKEAMMKEYEMTDLGLM 211

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
             YFLGI++ Q K  IFI+Q+KY   LLK+F++  CK V+TP+  N+ L+  DG+ +AD  
Sbjct: 212  KYFLGIQVKQTKGEIFITQEKYIHDLLKKFRLESCKPVSTPMAMNEKLQLNDGAEQADPK 271

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
             +RSL+GSL+YLT TRPDI+++ S +SRFM  PS++H+ AAKR+LRYL+GTK  GI Y  
Sbjct: 272  VYRSLVGSLIYLTNTRPDIVHSVSLVSRFMNEPSKLHFAAAKRILRYLQGTKKLGIKYVK 331

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
              D+KL+GYTDSDWAGS DD KSTS Y F LGS   SW+SKKQ +VA SSAEAEYI+A  
Sbjct: 332  EEDNKLVGYTDSDWAGSFDDRKSTSAYVFCLGSKAISWSSKKQNSVALSSAEAEYISANE 391

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
             T +A+WL+RIL D+ +  E  T IFCD++SAI+M+KNPVFH R+KHI++++++IR+   
Sbjct: 392  ATREAVWLRRILSDLQQKVEDPTPIFCDNQSAISMSKNPVFHGRSKHIELRHNYIRDMVQ 451

Query: 1263 NSEI 1274
              EI
Sbjct: 452  KKEI 455


>gb|PKA48313.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Apostasia shenzhenica]
          Length = 1063

 Score =  552 bits (1423), Expect = 0.0
 Identities = 264/425 (62%), Positives = 328/425 (77%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            + K N DGSV KYKARLV KGYAQQ GIDY ETF+PVAR++TIR +++LAA   W +YQ 
Sbjct: 592  RVKYNVDGSVHKYKARLVVKGYAQQAGIDYFETFSPVARMETIRTVLSLAAHYNWNVYQF 651

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNG L E++YVEQPQGF+IQGK+DKV +LKKALYGLKQAPRAWY +ID YF   
Sbjct: 652  DVKSAFLNGDLFEDVYVEQPQGFIIQGKQDKVYKLKKALYGLKQAPRAWYEKIDSYFCSN 711

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GF+RS+SEPTLY+K  G ++ LIV LYVDD+I+T ++   +  FKE M   FEMTDLGL+
Sbjct: 712  GFQRSESEPTLYVKKGGMSHILIVCLYVDDIIYTSSSSTFLNGFKEKMKHEFEMTDLGLL 771

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
            HYFLG+EI Q   GIF+SQ+KY   LL++F M  C  V TP+++++ L+ EDG+  A++ 
Sbjct: 772  HYFLGLEIKQTSKGIFLSQEKYTSDLLEKFGMRNCNKVETPMNSSEKLQLEDGTSLANSK 831

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
             FRSL+G L+YLT TRPD+++A S +SRFM  P++ H GAAKR+LRY++GT NYGIWY  
Sbjct: 832  YFRSLVGGLMYLTHTRPDLLFAVSMVSRFMHKPTKQHLGAAKRILRYIKGTSNYGIWYSQ 891

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
             T+ KL G+ DSDWAGS+DD KSTSG+ FTLGSG  SW SKKQA+VA SS+EAEY+AAA 
Sbjct: 892  TTNIKLFGFCDSDWAGSLDDRKSTSGFLFTLGSGAISWTSKKQASVALSSSEAEYVAAAS 951

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
               QAIW++RIL D+ + QE+AT IFCD+  AI MAKNP  H R KHI IKYHFIRE  +
Sbjct: 952  ACCQAIWIRRILTDLHQPQEEATNIFCDNMGAILMAKNPCQHGRAKHIDIKYHFIREMVS 1011

Query: 1263 NSEIE 1277
               IE
Sbjct: 1012 KGAIE 1016


>gb|KYP46287.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 715

 Score =  535 bits (1378), Expect = 0.0
 Identities = 266/424 (62%), Positives = 328/424 (77%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            +TK N DGSV K KARLV KGY QQYG+D+ +TFAPVAR DTIR L+ALAA+  WKIY  
Sbjct: 250  RTKLNYDGSVNKLKARLVVKGYHQQYGVDFLDTFAPVARHDTIRMLVALAAKFGWKIYHF 309

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNG+LEE+IYV+QP+GF ++G E+KV +L KALYGLKQAPRAWY+RID+Y  + 
Sbjct: 310  DVKSAFLNGFLEEDIYVDQPEGFQVKGSENKVYKLHKALYGLKQAPRAWYTRIDNYLLQK 369

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GF RS++E TLY+K       LI+SLYVDD++  G++ + + +FK DM   FEM+DLG M
Sbjct: 370  GFERSENEATLYVKRSQNEVKLIISLYVDDMLVIGSDFDSLRQFKHDMENEFEMSDLGQM 429

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
            +YFLG+EI+Q   GIFISQ+KY   +LK+F M  CK V TPL  N+ L   D   K D S
Sbjct: 430  NYFLGMEIYQCDAGIFISQRKYVLEILKKFHMEKCKPVDTPLVINEKLSLNDAIAKVDAS 489

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
             +RSLIGSLLYL+ATRPDIM+A S LSRFM +PSQ HYGAAKRVLRYL+GT +YG+W+  
Sbjct: 490  LYRSLIGSLLYLSATRPDIMFAASLLSRFMHSPSQAHYGAAKRVLRYLKGTTDYGLWFLQ 549

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
                +L GY DSDWAGSIDD KSTSGY F+ GSG+F+W SKKQ  VAQSSAEAEYI+AA 
Sbjct: 550  NESGELQGYADSDWAGSIDDSKSTSGYVFSFGSGVFTWNSKKQEVVAQSSAEAEYISAAA 609

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
              + AIWL++IL D+ + Q +AT I+ D+KSAIA+AKNPV + RTKHIK+KYH IREAE 
Sbjct: 610  AANHAIWLRKILCDVKQHQNEATIIWVDNKSAIAIAKNPVQYGRTKHIKVKYHAIREAEK 669

Query: 1263 NSEI 1274
            + E+
Sbjct: 670  SKEV 673


>gb|KYP67390.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 508

 Score =  527 bits (1358), Expect = 0.0
 Identities = 260/424 (61%), Positives = 320/424 (75%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            KTK   +G + ++KARLVAKGY Q+ GIDY E FAPVARLDTIR LI+++AQ  WKI+Q+
Sbjct: 49   KTKYKSNGEIDRFKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISISAQNNWKIHQM 108

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNG LEEE+YVEQP G+ ++GKEDKV + KKALYGLKQAPRAWY +ID YF + 
Sbjct: 109  DVKSAFLNGTLEEEVYVEQPAGYEVKGKEDKVYKWKKALYGLKQAPRAWYKKIDSYFVDN 168

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GF+R   E TLYIK+   +N LIV LYVDDLIFTGNN  M  EF+E M+K FEMTDLGLM
Sbjct: 169  GFQRCPFEHTLYIKSVDPDNILIVCLYVDDLIFTGNNPKMFAEFREAMVKCFEMTDLGLM 228

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
             YFLGI++ Q+ DGIFISQKK+A  +LK+FKM   K ++TP++    L  +    K + +
Sbjct: 229  SYFLGIKVDQQDDGIFISQKKFAGDILKKFKMENSKPISTPVEEKLKLTSDIEGKKVNPT 288

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
             ++SLIGSL YLTATRPDI+Y    LSRFM+ P   H+ AAKR+LRY++GT   GI+Y+ 
Sbjct: 289  LYKSLIGSLRYLTATRPDIVYGVGLLSRFMEKPRDSHWQAAKRILRYIKGTLTEGIFYDK 348

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVAQSSAEAEYIAAAM 1082
              D  L+GYTDSDWAG I+  KSTSGYAF LGSG  SW+SKKQ  VA S+AEAEYIAAA 
Sbjct: 349  DIDVNLVGYTDSDWAGDIETRKSTSGYAFNLGSGTISWSSKKQQVVALSTAEAEYIAAAS 408

Query: 1083 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 1262
              +QA+WL+R+LE M + Q   T IFCD+KS IA+ KNPVFH R+KHI I++H IRE  A
Sbjct: 409  CATQAVWLRRMLEVMHQKQNTPTVIFCDNKSTIALCKNPVFHGRSKHIDIRFHKIRELVA 468

Query: 1263 NSEI 1274
              E+
Sbjct: 469  EKEV 472


>gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1120

 Score =  547 bits (1409), Expect = 0.0
 Identities = 268/347 (77%), Positives = 308/347 (88%)
 Frame = +3

Query: 3    KTKPNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 182
            KTK NPDG++QK+KARLVAKGY+Q+ G+DY+ETFAPVARLDTIR LIALAA K W IYQL
Sbjct: 776  KTKLNPDGTIQKHKARLVAKGYSQKPGVDYNETFAPVARLDTIRTLIALAAHKGWNIYQL 835

Query: 183  DVKSAFLNGYLEEEIYVEQPQGFVIQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 362
            DVKSAFLNG LEEEIYVEQP GFV++G E KVLRLKKALYGLKQAPRAWYS+ID YFT+ 
Sbjct: 836  DVKSAFLNGVLEEEIYVEQPPGFVMKGHEGKVLRLKKALYGLKQAPRAWYSKIDQYFTD- 894

Query: 363  GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 542
            GFRRS+SEPTLYIKTQG  +TL++SLYVDDLI+TG N NM+MEFKEDMMKTFEMTDLGLM
Sbjct: 895  GFRRSKSEPTLYIKTQG-QHTLLLSLYVDDLIYTGTNTNMMMEFKEDMMKTFEMTDLGLM 953

Query: 543  HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMYGCKTVATPLDNNKALKKEDGSPKADNS 722
             YFLGIE+ QR DGIFISQKKY E+LLK+F MYGCK V T L  N+ L+K DG+P+AD S
Sbjct: 954  SYFLGIEVSQRNDGIFISQKKYTEALLKKFNMYGCKPVRTLLVTNEKLQKVDGAPEADAS 1013

Query: 723  QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYES 902
            +++SL+GSLLYL ATRPDIMYATS LSRFMQ P+QIHYG  KR+LRYL+GT+ +GIWY++
Sbjct: 1014 RYKSLVGSLLYLIATRPDIMYATSLLSRFMQKPNQIHYGTGKRILRYLQGTREFGIWYKN 1073

Query: 903  VTDSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSGIFSWASKKQATVA 1043
            +T S++IGYTD+DWA SIDDMKSTSGYAF+LGSG FSW SKKQATVA
Sbjct: 1074 MTKSRMIGYTDNDWARSIDDMKSTSGYAFSLGSGFFSWVSKKQATVA 1120