BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00004195
         (1056 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011092547.1| DNA-directed RNA polymerases II, IV and V su...   574   0.0  
gb|PIN17597.1| RNA polymerase II, subunit POLR2C/RPB3 [Handroant...   573   0.0  
ref|XP_022868456.1| DNA-directed RNA polymerases II, IV and V su...   547   0.0  
ref|XP_022896127.1| DNA-directed RNA polymerases II, IV and V su...   543   0.0  
ref|XP_007042502.1| PREDICTED: DNA-directed RNA polymerases II, ...   534   0.0  
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, ...   534   0.0  
dbj|GAV81673.1| RNA_pol_A_bac domain-containing protein/RNA_pol_...   533   0.0  
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   533   0.0  
ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, ...   532   0.0  
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ...   532   0.0  
ref|XP_022726703.1| DNA-directed RNA polymerases II, IV and V su...   532   0.0  
ref|XP_021653833.1| DNA-directed RNA polymerases II, IV and V su...   531   0.0  
ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerases II, ...   531   0.0  
ref|XP_023754732.1| DNA-directed RNA polymerases II, IV and V su...   530   0.0  
ref|XP_015076219.1| PREDICTED: DNA-directed RNA polymerases II, ...   528   0.0  
ref|XP_002518700.1| PREDICTED: DNA-directed RNA polymerases II, ...   525   0.0  
ref|XP_021640774.1| DNA-directed RNA polymerases II, IV and V su...   525   0.0  
ref|XP_021618487.1| DNA-directed RNA polymerases II, IV and V su...   525   0.0  
ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, ...   523   0.0  
ref|XP_016734489.1| PREDICTED: DNA-directed RNA polymerases II, ...   523   0.0  

>ref|XP_011092547.1| DNA-directed RNA polymerases II, IV and V subunit 3 [Sesamum
           indicum]
          Length = 319

 Score =  574 bits (1479), Expect = 0.0
 Identities = 290/319 (90%), Positives = 298/319 (93%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEGVSYQRFPKIKIRTVRDDFMKFELR+TDASIANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGVSYQRFPKIKIRTVRDDFMKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDLYSSDHTVVPVDF DSSTG DN +NRGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFSDSSTGFDNTENRGIIIVKLRRGQELVLRAIARKGIGKDHAKW 180

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEPEIYIN              FV+SSPTKVFDIN NT QVY++DAEAYTY
Sbjct: 181 SPAATVTFMYEPEIYINEEMMEGLTLEEKKEFVDSSPTKVFDINPNTHQVYVHDAEAYTY 240

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTG IKASQLFLNAI+VLKQKLDAVRLS+
Sbjct: 241 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKASQLFLNAIDVLKQKLDAVRLSS 300

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEADEQFGELGAHMRGG
Sbjct: 301 DTVEADEQFGELGAHMRGG 319


>gb|PIN17597.1| RNA polymerase II, subunit POLR2C/RPB3 [Handroanthus impetiginosus]
          Length = 319

 Score =  573 bits (1477), Expect = 0.0
 Identities = 290/319 (90%), Positives = 298/319 (93%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEG SYQRFPKIK+RTVRDDFMKFELRETD SIANALRRVMI+EVPTIAIDLVEIEVNSS
Sbjct: 1   MEGASYQRFPKIKVRTVRDDFMKFELRETDPSIANALRRVMISEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDLYSSDHTVVPVDF DSS+G DN++NRGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFTDSSSGFDNSENRGIIIVKLRRGQELILRAIARKGIGKDHAKW 180

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEPEIYIN              FVESSPTKVFDIN +TQQVY++DAEAYTY
Sbjct: 181 SPAATVTFMYEPEIYINEELMETLTLEEKKEFVESSPTKVFDINPHTQQVYVHDAEAYTY 240

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA
Sbjct: 241 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 300

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEADEQFGELGAHMRGG
Sbjct: 301 DTVEADEQFGELGAHMRGG 319


>ref|XP_022868456.1| DNA-directed RNA polymerases II, IV and V subunit 3-like [Olea
           europaea var. sylvestris]
          Length = 319

 Score =  547 bits (1410), Expect = 0.0
 Identities = 278/319 (87%), Positives = 291/319 (91%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEGVSYQRFPKIKIR VRDDFMKFELRETD+SIANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGVSYQRFPKIKIREVRDDFMKFELRETDSSIANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDLYSSDHTVVPVDF DSS+G DN++N+GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFSDSSSGFDNSENKGIIIVKLRRGQELILRAIARKGIGKDHAKW 180

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEP+IYIN              FVESSPT VF  + NT QV I+DAEAYTY
Sbjct: 181 SPAATVTFMYEPDIYINEELMESLTPDEKREFVESSPTPVFKFDENTNQVLIHDAEAYTY 240

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           D+EV+KKAE+MGKPGLVEI AKED FIFTVE+TGAIKASQL LNAI+VLKQKLDAVRLSA
Sbjct: 241 DEEVIKKAESMGKPGLVEIRAKEDCFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSA 300

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEADEQFGELGAHMRGG
Sbjct: 301 DTVEADEQFGELGAHMRGG 319


>ref|XP_022896127.1| DNA-directed RNA polymerases II, IV and V subunit 3-like [Olea
           europaea var. sylvestris]
          Length = 319

 Score =  543 bits (1399), Expect = 0.0
 Identities = 276/319 (86%), Positives = 289/319 (90%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEG SYQRFPKIKIR VRDD+MKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGASYQRFPKIKIREVRDDYMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDLYSSDHTVVPVDF DSS+G +N +N+GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFTDSSSGFENLENKGIIIVKLRRGQELILRAIARKGIGKDHAKW 180

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEPEIYIN              FVESSPT VF  +  T QV I+DAEAYTY
Sbjct: 181 SPAATVTFMYEPEIYINEELMESLTPDEKREFVESSPTPVFKFDEITNQVLIHDAEAYTY 240

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           D+EV+KKAE+MGKPGL+EI AKEDSFIFTVE+TGAIKASQL LNAI+VLKQKLDAVRLSA
Sbjct: 241 DEEVIKKAESMGKPGLIEIRAKEDSFIFTVESTGAIKASQLLLNAIDVLKQKLDAVRLSA 300

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEADEQFGELGAHMRGG
Sbjct: 301 DTVEADEQFGELGAHMRGG 319


>ref|XP_007042502.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Theobroma cacao]
 gb|EOX98333.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
          Length = 318

 Score =  534 bits (1375), Expect = 0.0
 Identities = 271/319 (84%), Positives = 291/319 (91%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEGVSYQRFPK+KIR ++DD+ KFELR+TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGVSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDLYSSDHTVVPVDF DS+ G D+++ RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFTDSA-GYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEPEI+IN              FVESSPT+VFDI+ NTQQV + D EAYTY
Sbjct: 180 SPAATVTFMYEPEIHINEDMMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVVDPEAYTY 239

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAIEVLKQKLDAVRLS 
Sbjct: 240 DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSE 299

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Vitis vinifera]
 ref|XP_019074554.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Vitis vinifera]
          Length = 318

 Score =  534 bits (1375), Expect = 0.0
 Identities = 273/319 (85%), Positives = 292/319 (91%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEGVSYQRFPKIKIR V+DD+ KFELRETDAS+ANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1   MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDL SSDHTVVPVDF DSS G D+AD +GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLISSDHTVVPVDFSDSS-GYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEPEI+IN              +VESSPTKVFDI+A++QQV + DAEAYTY
Sbjct: 180 SPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTY 239

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAI+VLKQKLDAVRLS 
Sbjct: 240 DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSE 299

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318


>dbj|GAV81673.1| RNA_pol_A_bac domain-containing protein/RNA_pol_L domain-containing
           protein [Cephalotus follicularis]
          Length = 318

 Score =  533 bits (1373), Expect = 0.0
 Identities = 272/319 (85%), Positives = 289/319 (90%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEGVSYQRFPKIKIR V+DD+MKFELRETDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGVSYQRFPKIKIREVKDDYMKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCLTDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDLYSSDHTVVPVDF DS+ G D  + RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFSDSA-GYDVPEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEPEI+IN              +VESSPTKVF+ N  TQQV + DAEAYTY
Sbjct: 180 SPAATVTFMYEPEIHINEDLMETLTSEEKRSWVESSPTKVFEFNHETQQVAVVDAEAYTY 239

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           D+EV+KKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQL LNAIEVLKQKLD+VRLS 
Sbjct: 240 DEEVIKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLVLNAIEVLKQKLDSVRLSE 299

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAH+RGG
Sbjct: 300 DTVEADDQFGELGAHLRGG 318


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  533 bits (1372), Expect = 0.0
 Identities = 272/319 (85%), Positives = 292/319 (91%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEGVSYQRFPKIKIR V+DD+ KFELRETDAS+ANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1   MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+ D+TLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDL SSDHTVVPVDF DSS G D+AD +GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLISSDHTVVPVDFSDSS-GYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEPEI+IN              +VESSPTKVFDI+A++QQV + DAEAYTY
Sbjct: 180 SPAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTY 239

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAI+VLKQKLDAVRLS 
Sbjct: 240 DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSE 299

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318


>ref|XP_012436162.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Gossypium raimondii]
 ref|XP_017634647.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Gossypium arboreum]
 gb|KHG04309.1| DNA-directed RNA polymerase II subunit RPB3-A -like protein
           [Gossypium arboreum]
 gb|KJB47376.1| hypothetical protein B456_008G023500 [Gossypium raimondii]
          Length = 318

 Score =  532 bits (1371), Expect = 0.0
 Identities = 269/319 (84%), Positives = 291/319 (91%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEG+SYQRFPK+KIR ++DD+ KFELR+TDAS+ANALRRVMI+EVPTIAIDLVEIEVNSS
Sbjct: 1   MEGISYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMISEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKCI+DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDLYSSDHTVVPVDF D++ G D+ + RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFTDNA-GYDSTEPRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEPEI+IN              FVESSPTKVFDI+ NTQQV + D EAYTY
Sbjct: 180 SPAATVTFMYEPEIHINEDLMESLTLEEKLSFVESSPTKVFDIDPNTQQVVVVDPEAYTY 239

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEVLKKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAIE+LKQKLDAVRLS 
Sbjct: 240 DDEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSE 299

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318


>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Solanum tuberosum]
          Length = 319

 Score =  532 bits (1371), Expect = 0.0
 Identities = 268/319 (84%), Positives = 286/319 (89%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEGVSYQRFPKIKIR V+DDFMKFELRETDASIANALRR+MIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGVSYQRFPKIKIREVKDDFMKFELRETDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFI+HRLGL+PLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDV
Sbjct: 61  VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDL SSDHTVVPVD+ D+S+  DN  N+GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLLSSDHTVVPVDYSDTSSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEPEIYIN               VESSPTKVF I+   +QV + D EAYTY
Sbjct: 181 SPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYTY 240

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEVLKKAEAMGKPG+VEIHAKEDSFIFTVETTGA+KASQL LNAIEVLKQKLDAVRLS 
Sbjct: 241 DDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSD 300

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAHMRGG
Sbjct: 301 DTVEADDQFGELGAHMRGG 319


>ref|XP_022726703.1| DNA-directed RNA polymerases II, IV and V subunit 3 [Durio
           zibethinus]
          Length = 318

 Score =  532 bits (1370), Expect = 0.0
 Identities = 269/319 (84%), Positives = 291/319 (91%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEGVSYQRFPK+KIR ++DD+ KFELR+TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGVSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKC+NDQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMNDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDLYSSDHTVVPVDF DS+ G D+++ RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFTDSA-GYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYE EI+IN              FVESSPT+VFDI+ NTQQV + D EAYTY
Sbjct: 180 SPAATVTFMYEAEIHINEDLMETLTLEEKQSFVESSPTRVFDIDPNTQQVVVVDPEAYTY 239

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEV+KKAEAMGKPGLVEI+AKEDSFIFTVE+TGAIKASQL LNAIE+LKQKLDAVRLS 
Sbjct: 240 DDEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSE 299

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318


>ref|XP_021653833.1| DNA-directed RNA polymerases II, IV and V subunit 3 [Hevea
           brasiliensis]
          Length = 318

 Score =  531 bits (1368), Expect = 0.0
 Identities = 269/319 (84%), Positives = 290/319 (90%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEGVSYQRFP++KIR ++DD++KFELR+TDASIANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGVSYQRFPRVKIRELKDDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCEYCSVEFHLRAKCI DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDLYSSDHTVVPVDF DS+ G D+++ +GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFSDSA-GYDSSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEP+I+IN               VESSPTKVFDI+ NTQQV + D EAYTY
Sbjct: 180 SPAATVTFMYEPDIHINEDLMETLTLEEKQSLVESSPTKVFDIDPNTQQVVVVDPEAYTY 239

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEV+KKA AMGKPGLV+IHAKEDSFIFTVE+TGAIKASQL LNAIEVLKQKLDAVRLS 
Sbjct: 240 DDEVIKKAIAMGKPGLVDIHAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSE 299

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318


>ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Solanum lycopersicum]
          Length = 319

 Score =  531 bits (1367), Expect = 0.0
 Identities = 266/319 (83%), Positives = 286/319 (89%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEGVSYQRFPKIK+R V+DDFMKFELR+TDASIANALRR+MIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGVSYQRFPKIKVREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFI+HRLGL+PLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDV
Sbjct: 61  VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDL SSDHTVVPVD+ D+S+  DN  N+GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLLSSDHTVVPVDYSDASSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEPEIYIN               VESSPTKVF I+   +QV + D EAYTY
Sbjct: 181 SPAATVTFMYEPEIYINEDMMESLTLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYTY 240

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEVLKKAEAMGKPG+VEIHAKEDSFIFTVETTGA+KASQL LNAIEVLKQKLDAVRLS 
Sbjct: 241 DDEVLKKAEAMGKPGVVEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSD 300

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAHMRGG
Sbjct: 301 DTVEADDQFGELGAHMRGG 319


>ref|XP_023754732.1| DNA-directed RNA polymerases II, IV and V subunit 3-like [Lactuca
           sativa]
 gb|PLY92309.1| hypothetical protein LSAT_9X111421 [Lactuca sativa]
          Length = 320

 Score =  530 bits (1365), Expect = 0.0
 Identities = 269/320 (84%), Positives = 287/320 (89%), Gaps = 1/320 (0%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEG SYQRFPK+KIR ++DD+ KFELRETDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGASYQRFPKVKIRELKDDYAKFELRETDASVANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKCINDQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCINDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDN-ADNRGIIIVKLRRGQELGLRAIARKGIGKDHAK 570
           TSKDLYSSDHTVVPVDF D+S+G +N  D RGI IVKLR+GQEL LRAIARKGIGKDHAK
Sbjct: 121 TSKDLYSSDHTVVPVDFSDTSSGFENPEDQRGITIVKLRKGQELRLRAIARKGIGKDHAK 180

Query: 571 WSPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYT 750
           WSPAATVTFMYEPEI+IN               VESSPTKVF IN +TQQV + D EAYT
Sbjct: 181 WSPAATVTFMYEPEIHINEEMMETLSLEEKTSVVESSPTKVFGINPHTQQVEVVDPEAYT 240

Query: 751 YDDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLS 930
           YDDEVLKK EAMGKPGLVEI+AKEDSFIFTVE+TGA+KASQL LNAIEVLKQKLDAVRLS
Sbjct: 241 YDDEVLKKVEAMGKPGLVEIYAKEDSFIFTVESTGAVKASQLVLNAIEVLKQKLDAVRLS 300

Query: 931 ADTVEADEQFGELGAHMRGG 990
            DTVEAD+QFGELGAHMRGG
Sbjct: 301 EDTVEADDQFGELGAHMRGG 320


>ref|XP_015076219.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Solanum pennellii]
          Length = 319

 Score =  528 bits (1361), Expect = 0.0
 Identities = 265/319 (83%), Positives = 285/319 (89%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEG SYQRFPKIKIR V+DDFMKFELR+TDASIANALRR+MIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGASYQRFPKIKIREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFI+HRLGL+PLTSERAM+MRFSRDCDACDGDGQCEYCSVEF+LR KC++DQTLDV
Sbjct: 61  VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDL SSDHTVVPVD+ D+S+  DN  N+GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLLSSDHTVVPVDYSDASSSFDNTPNKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 180

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEPEIYIN               VESSPTKVF I+   +QV + D EAYTY
Sbjct: 181 SPAATVTFMYEPEIYINEDMMESLSLEEKTELVESSPTKVFGIDPENKQVIVVDPEAYTY 240

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEVLKKAEAMGKPG+VEIHA+EDSFIFTVETTGA+KASQL LNAIEVLKQKLDAVRLS 
Sbjct: 241 DDEVLKKAEAMGKPGVVEIHAREDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSD 300

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAHMRGG
Sbjct: 301 DTVEADDQFGELGAHMRGG 319


>ref|XP_002518700.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Ricinus communis]
 gb|EEF43625.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
          Length = 318

 Score =  525 bits (1353), Expect = 0.0
 Identities = 265/319 (83%), Positives = 288/319 (90%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEG SYQRFP+IKIR ++DD+ KFELR+TDAS+ANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1   MEGASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQC+YCSVEFHLRAKCI DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDLYSSDHTVVPVDF DSS G D+++ RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFSDSS-GYDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEP+I+IN              +VESSPTKVFDI+ NTQQV + D EAYTY
Sbjct: 180 SPAATVTFMYEPDIHINEDLMESLSLEEKQSWVESSPTKVFDIDPNTQQVVVVDPEAYTY 239

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           D+EV+KKAE+MGKPGLV I AKEDSFIFTVE+TGAIKASQL LNAIE+LKQKLDAVRLS 
Sbjct: 240 DEEVIKKAESMGKPGLVNIQAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSE 299

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318


>ref|XP_021640774.1| DNA-directed RNA polymerases II, IV and V subunit 3-like [Hevea
           brasiliensis]
          Length = 318

 Score =  525 bits (1352), Expect = 0.0
 Identities = 267/319 (83%), Positives = 289/319 (90%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEGVSYQRFPK+KIR ++ D++KFELR+TDASIANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGVSYQRFPKVKIRELKGDYVKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCEYCSVEFHLRAKCI+DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCISDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDLYSSDHTVVPVDF D + G D+++ +GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFSDPA-GYDSSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEP+I+IN              +VESSPTKVFDI+  TQQV + D EAYTY
Sbjct: 180 SPAATVTFMYEPDIHINEDLMETLTLEEKQSWVESSPTKVFDIDPVTQQVVVVDPEAYTY 239

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEV+KKAEAMGKPGLV+I AKEDSFIFTVE+TGAIKASQL LNAIEVLKQKLDAVRLS 
Sbjct: 240 DDEVIKKAEAMGKPGLVDIRAKEDSFIFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSE 299

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318


>ref|XP_021618487.1| DNA-directed RNA polymerases II, IV and V subunit 3-like isoform X1
           [Manihot esculenta]
          Length = 318

 Score =  525 bits (1351), Expect = 0.0
 Identities = 265/319 (83%), Positives = 288/319 (90%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEGVSYQRFP++KIR ++DD+ KFELR+TDASIANALRRVMIAEVPT+AIDLVEIEVNSS
Sbjct: 1   MEGVSYQRFPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQCEYCSVEFHLRAKCI DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           +SKDLYSSDH+VVPVDF DS+ G D+++ +GIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 SSKDLYSSDHSVVPVDFSDSA-GYDSSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEPEI+IN              +VESSPTKVFD + NTQQV + D EAYTY
Sbjct: 180 SPAATVTFMYEPEIHINEDLMETLTLEEKISWVESSPTKVFDFDPNTQQVIVVDPEAYTY 239

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEV+KKAEAMGKPGLV+I AKEDSFIFTVE+TGAIKASQL LNAIEVLK KLDAVRLS 
Sbjct: 240 DDEVIKKAEAMGKPGLVDIRAKEDSFIFTVESTGAIKASQLVLNAIEVLKTKLDAVRLSE 299

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318


>ref|XP_012459245.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Gossypium raimondii]
 gb|KJB77656.1| hypothetical protein B456_012G149200 [Gossypium raimondii]
          Length = 318

 Score =  523 bits (1348), Expect = 0.0
 Identities = 262/319 (82%), Positives = 289/319 (90%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEG SYQRFP++KIR ++DD+ KFEL +TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGASYQRFPRVKIRELKDDYAKFELHDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTS+RAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKCI+DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSQRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDLYSSDHTVVPVDF DS+ G ++++ RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFTDSA-GYESSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEPEI+IN              FV+SSPT+VFDI+ NTQQV + D EAYTY
Sbjct: 180 SPAATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVFDIDPNTQQVVVVDPEAYTY 239

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEVLKKAEAMGKPGLVEI+AKEDSFIFT+E+TGA+KA QL LNAIE+LKQKLDAVRLS 
Sbjct: 240 DDEVLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKAFQLVLNAIEILKQKLDAVRLSE 299

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318


>ref|XP_016734489.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3
           [Gossypium hirsutum]
 ref|XP_017612468.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Gossypium arboreum]
 gb|KHG20623.1| DNA-directed RNA polymerase II subunit RPB3-A -like protein
           [Gossypium arboreum]
          Length = 318

 Score =  523 bits (1348), Expect = 0.0
 Identities = 262/319 (82%), Positives = 289/319 (90%)
 Frame = +1

Query: 34  MEGVSYQRFPKIKIRTVRDDFMKFELRETDASIANALRRVMIAEVPTIAIDLVEIEVNSS 213
           MEG SYQRFP++KIR ++DD+ KFEL +TDAS+ANALRRVMIAEVPTIAIDLVEIEVNSS
Sbjct: 1   MEGASYQRFPRVKIRELKDDYAKFELHDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 214 VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV 393
           VLNDEFIAHRLGLIPLTS+RAM+MRFSRDCDACDGDGQCE+CSVEFHLRAKCI+DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSQRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV 120

Query: 394 TSKDLYSSDHTVVPVDFPDSSTGLDNADNRGIIIVKLRRGQELGLRAIARKGIGKDHAKW 573
           TSKDLYSSDHTVVPVDF D + G ++++ RGIIIVKLRRGQEL LRAIARKGIGKDHAKW
Sbjct: 121 TSKDLYSSDHTVVPVDFTDYA-GYESSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW 179

Query: 574 SPAATVTFMYEPEIYINXXXXXXXXXXXXXXFVESSPTKVFDINANTQQVYIYDAEAYTY 753
           SPAATVTFMYEPEI+IN              FV+SSPT+VFDI+ NTQQV + D EAYTY
Sbjct: 180 SPAATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVFDIDPNTQQVVVVDPEAYTY 239

Query: 754 DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGAIKASQLFLNAIEVLKQKLDAVRLSA 933
           DDEVLKKAEAMGKPGLVEI+AKEDSFIFT+E+TGA+KASQL LNAIE+LKQKLDAVRLS 
Sbjct: 240 DDEVLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKASQLVLNAIEILKQKLDAVRLSE 299

Query: 934 DTVEADEQFGELGAHMRGG 990
           DTVEAD+QFGELGAHMRGG
Sbjct: 300 DTVEADDQFGELGAHMRGG 318